co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G30250

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
2	GO:1900367: positive regulation of defense response to insect	0.00E+00
3	GO:0002764: immune response-regulating signaling pathway	0.00E+00
4	GO:0009268: response to pH	0.00E+00
5	GO:0032499: detection of peptidoglycan	0.00E+00
6	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
7	GO:0071327: cellular response to trehalose stimulus	0.00E+00
8	GO:0006468: protein phosphorylation	2.22E-11
9	GO:0080142: regulation of salicylic acid biosynthetic process	1.64E-07
10	GO:0009626: plant-type hypersensitive response	1.12E-06
11	GO:0046777: protein autophosphorylation	5.83E-06
12	GO:0000187: activation of MAPK activity	1.73E-05
13	GO:0042742: defense response to bacterium	1.99E-05
14	GO:0002237: response to molecule of bacterial origin	2.94E-05
15	GO:2000022: regulation of jasmonic acid mediated signaling pathway	7.81E-05
16	GO:0031348: negative regulation of defense response	7.81E-05
17	GO:2000037: regulation of stomatal complex patterning	1.04E-04
18	GO:0009751: response to salicylic acid	1.23E-04
19	GO:0009617: response to bacterium	1.35E-04
20	GO:1900056: negative regulation of leaf senescence	1.37E-04
21	GO:0051245: negative regulation of cellular defense response	2.09E-04
22	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.09E-04
23	GO:0010941: regulation of cell death	2.09E-04
24	GO:0051180: vitamin transport	2.09E-04
25	GO:0030974: thiamine pyrophosphate transport	2.09E-04
26	GO:0010045: response to nickel cation	2.09E-04
27	GO:0019673: GDP-mannose metabolic process	2.09E-04
28	GO:1901183: positive regulation of camalexin biosynthetic process	2.09E-04
29	GO:0032491: detection of molecule of fungal origin	2.09E-04
30	GO:0034975: protein folding in endoplasmic reticulum	2.09E-04
31	GO:0048482: plant ovule morphogenesis	2.09E-04
32	GO:0010365: positive regulation of ethylene biosynthetic process	2.09E-04
33	GO:0051938: L-glutamate import	2.09E-04
34	GO:0009816: defense response to bacterium, incompatible interaction	3.44E-04
35	GO:0043069: negative regulation of programmed cell death	3.71E-04
36	GO:0009817: defense response to fungus, incompatible interaction	4.53E-04
37	GO:0031349: positive regulation of defense response	4.66E-04
38	GO:0015893: drug transport	4.66E-04
39	GO:0010042: response to manganese ion	4.66E-04
40	GO:0010541: acropetal auxin transport	4.66E-04
41	GO:0019725: cellular homeostasis	4.66E-04
42	GO:0002221: pattern recognition receptor signaling pathway	4.66E-04
43	GO:0043091: L-arginine import	4.66E-04
44	GO:0046939: nucleotide phosphorylation	4.66E-04
45	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	4.66E-04
46	GO:0015802: basic amino acid transport	4.66E-04
47	GO:0080185: effector dependent induction by symbiont of host immune response	4.66E-04
48	GO:0010618: aerenchyma formation	4.66E-04
49	GO:1902066: regulation of cell wall pectin metabolic process	4.66E-04
50	GO:0010229: inflorescence development	5.58E-04
51	GO:0007034: vacuolar transport	6.29E-04
52	GO:0070588: calcium ion transmembrane transport	7.02E-04
53	GO:0010581: regulation of starch biosynthetic process	7.59E-04
54	GO:0048586: regulation of long-day photoperiodism, flowering	7.59E-04
55	GO:0032922: circadian regulation of gene expression	7.59E-04
56	GO:0002230: positive regulation of defense response to virus by host	7.59E-04
57	GO:1901672: positive regulation of systemic acquired resistance	7.59E-04
58	GO:0016045: detection of bacterium	7.59E-04
59	GO:0009062: fatty acid catabolic process	7.59E-04
60	GO:0010359: regulation of anion channel activity	7.59E-04
61	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	7.59E-04
62	GO:0051176: positive regulation of sulfur metabolic process	7.59E-04
63	GO:0046621: negative regulation of organ growth	7.59E-04
64	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	7.59E-04
65	GO:0003333: amino acid transmembrane transport	1.04E-03
66	GO:0010104: regulation of ethylene-activated signaling pathway	1.08E-03
67	GO:0072583: clathrin-dependent endocytosis	1.08E-03
68	GO:0010306: rhamnogalacturonan II biosynthetic process	1.08E-03
69	GO:0006612: protein targeting to membrane	1.08E-03
70	GO:0015696: ammonium transport	1.08E-03
71	GO:0071323: cellular response to chitin	1.08E-03
72	GO:0046713: borate transport	1.08E-03
73	GO:0070301: cellular response to hydrogen peroxide	1.08E-03
74	GO:0006952: defense response	1.11E-03
75	GO:0009814: defense response, incompatible interaction	1.13E-03
76	GO:0016226: iron-sulfur cluster assembly	1.13E-03
77	GO:0010227: floral organ abscission	1.23E-03
78	GO:0072488: ammonium transmembrane transport	1.44E-03
79	GO:0010363: regulation of plant-type hypersensitive response	1.44E-03
80	GO:0071219: cellular response to molecule of bacterial origin	1.44E-03
81	GO:0010508: positive regulation of autophagy	1.44E-03
82	GO:2000038: regulation of stomatal complex development	1.44E-03
83	GO:0060548: negative regulation of cell death	1.44E-03
84	GO:0046345: abscisic acid catabolic process	1.44E-03
85	GO:0018344: protein geranylgeranylation	1.83E-03
86	GO:0010225: response to UV-C	1.83E-03
87	GO:0009697: salicylic acid biosynthetic process	1.83E-03
88	GO:0010200: response to chitin	1.85E-03
89	GO:0018105: peptidyl-serine phosphorylation	1.97E-03
90	GO:0002229: defense response to oomycetes	2.07E-03
91	GO:0035556: intracellular signal transduction	2.07E-03
92	GO:0016032: viral process	2.21E-03
93	GO:0048317: seed morphogenesis	2.26E-03
94	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.26E-03
95	GO:1900425: negative regulation of defense response to bacterium	2.26E-03
96	GO:0010942: positive regulation of cell death	2.26E-03
97	GO:0010405: arabinogalactan protein metabolic process	2.26E-03
98	GO:0009423: chorismate biosynthetic process	2.71E-03
99	GO:0010310: regulation of hydrogen peroxide metabolic process	2.71E-03
100	GO:0001666: response to hypoxia	2.98E-03
101	GO:0009615: response to virus	2.98E-03
102	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.15E-03
103	GO:0010038: response to metal ion	3.20E-03
104	GO:0010161: red light signaling pathway	3.20E-03
105	GO:0009627: systemic acquired resistance	3.32E-03
106	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.71E-03
107	GO:0030162: regulation of proteolysis	3.71E-03
108	GO:0032875: regulation of DNA endoreduplication	3.71E-03
109	GO:0045010: actin nucleation	3.71E-03
110	GO:0048193: Golgi vesicle transport	4.24E-03
111	GO:0010204: defense response signaling pathway, resistance gene-independent	4.24E-03
112	GO:2000031: regulation of salicylic acid mediated signaling pathway	4.24E-03
113	GO:0010099: regulation of photomorphogenesis	4.24E-03
114	GO:0009932: cell tip growth	4.24E-03
115	GO:0090333: regulation of stomatal closure	4.80E-03
116	GO:0010112: regulation of systemic acquired resistance	4.80E-03
117	GO:0048354: mucilage biosynthetic process involved in seed coat development	5.38E-03
118	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.38E-03
119	GO:1900426: positive regulation of defense response to bacterium	5.38E-03
120	GO:0006887: exocytosis	5.84E-03
121	GO:0009870: defense response signaling pathway, resistance gene-dependent	5.99E-03
122	GO:0051707: response to other organism	6.33E-03
123	GO:0009073: aromatic amino acid family biosynthetic process	6.62E-03
124	GO:0002213: defense response to insect	7.28E-03
125	GO:0010105: negative regulation of ethylene-activated signaling pathway	7.28E-03
126	GO:0008361: regulation of cell size	7.28E-03
127	GO:0031347: regulation of defense response	7.66E-03
128	GO:0000165: MAPK cascade	7.66E-03
129	GO:0009785: blue light signaling pathway	7.96E-03
130	GO:0018107: peptidyl-threonine phosphorylation	7.96E-03
131	GO:0034605: cellular response to heat	8.66E-03
132	GO:0009266: response to temperature stimulus	8.66E-03
133	GO:0046854: phosphatidylinositol phosphorylation	9.37E-03
134	GO:0009909: regulation of flower development	9.46E-03
135	GO:0009863: salicylic acid mediated signaling pathway	1.09E-02
136	GO:0006487: protein N-linked glycosylation	1.09E-02
137	GO:0009620: response to fungus	1.11E-02
138	GO:0048278: vesicle docking	1.25E-02
139	GO:0010017: red or far-red light signaling pathway	1.33E-02
140	GO:0071456: cellular response to hypoxia	1.33E-02
141	GO:0009625: response to insect	1.41E-02
142	GO:0009408: response to heat	1.43E-02
143	GO:0050832: defense response to fungus	1.53E-02
144	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.59E-02
145	GO:0070417: cellular response to cold	1.59E-02
146	GO:0042391: regulation of membrane potential	1.68E-02
147	GO:0071472: cellular response to salt stress	1.77E-02
148	GO:0048544: recognition of pollen	1.86E-02
149	GO:0061025: membrane fusion	1.86E-02
150	GO:0009873: ethylene-activated signaling pathway	1.97E-02
151	GO:0010193: response to ozone	2.06E-02
152	GO:0006891: intra-Golgi vesicle-mediated transport	2.06E-02
153	GO:0006635: fatty acid beta-oxidation	2.06E-02
154	GO:0007275: multicellular organism development	2.08E-02
155	GO:0010150: leaf senescence	2.11E-02
156	GO:0030163: protein catabolic process	2.25E-02
157	GO:0019760: glucosinolate metabolic process	2.36E-02
158	GO:0006464: cellular protein modification process	2.36E-02
159	GO:0009737: response to abscisic acid	2.38E-02
160	GO:0006470: protein dephosphorylation	2.42E-02
161	GO:0007166: cell surface receptor signaling pathway	2.42E-02
162	GO:0006904: vesicle docking involved in exocytosis	2.46E-02
163	GO:0000910: cytokinesis	2.57E-02
164	GO:0051607: defense response to virus	2.57E-02
165	GO:0009911: positive regulation of flower development	2.67E-02
166	GO:0006906: vesicle fusion	2.89E-02
167	GO:0048573: photoperiodism, flowering	3.00E-02
168	GO:0016049: cell growth	3.11E-02
169	GO:0015031: protein transport	3.14E-02
170	GO:0008219: cell death	3.23E-02
171	GO:0009813: flavonoid biosynthetic process	3.34E-02
172	GO:0009409: response to cold	3.44E-02
173	GO:0006499: N-terminal protein myristoylation	3.46E-02
174	GO:0006970: response to osmotic stress	3.52E-02
175	GO:0048527: lateral root development	3.58E-02
176	GO:0009631: cold acclimation	3.58E-02
177	GO:0010043: response to zinc ion	3.58E-02
178	GO:0007568: aging	3.58E-02
179	GO:0006865: amino acid transport	3.70E-02
180	GO:0009867: jasmonic acid mediated signaling pathway	3.82E-02
181	GO:0045087: innate immune response	3.82E-02
182	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.18E-02
183	GO:0006839: mitochondrial transport	4.19E-02
184	GO:0006897: endocytosis	4.32E-02
185	GO:0044550: secondary metabolite biosynthetic process	4.39E-02
186	GO:0009640: photomorphogenesis	4.57E-02
187	GO:0009744: response to sucrose	4.57E-02
188	GO:0045892: negative regulation of transcription, DNA-templated	4.90E-02
189	GO:0006886: intracellular protein transport	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0005522: profilin binding	0.00E+00
2	GO:0004107: chorismate synthase activity	0.00E+00
3	GO:2001080: chitosan binding	0.00E+00
4	GO:0016301: kinase activity	2.71E-12
5	GO:0004674: protein serine/threonine kinase activity	1.80E-09
6	GO:0005524: ATP binding	2.74E-09
7	GO:0005515: protein binding	9.32E-06
8	GO:0004672: protein kinase activity	1.35E-05
9	GO:0019199: transmembrane receptor protein kinase activity	3.17E-05
10	GO:0004708: MAP kinase kinase activity	1.76E-04
11	GO:1901149: salicylic acid binding	2.09E-04
12	GO:0090422: thiamine pyrophosphate transporter activity	2.09E-04
13	GO:0004662: CAAX-protein geranylgeranyltransferase activity	2.09E-04
14	GO:0015085: calcium ion transmembrane transporter activity	2.09E-04
15	GO:0080042: ADP-glucose pyrophosphohydrolase activity	2.09E-04
16	GO:0008446: GDP-mannose 4,6-dehydratase activity	2.09E-04
17	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	2.09E-04
18	GO:0032050: clathrin heavy chain binding	2.09E-04
19	GO:0008809: carnitine racemase activity	2.09E-04
20	GO:0008375: acetylglucosaminyltransferase activity	3.70E-04
21	GO:0005543: phospholipid binding	4.29E-04
22	GO:0017110: nucleoside-diphosphatase activity	4.66E-04
23	GO:0080041: ADP-ribose pyrophosphohydrolase activity	4.66E-04
24	GO:0005388: calcium-transporting ATPase activity	5.58E-04
25	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.94E-04
26	GO:0043424: protein histidine kinase binding	9.49E-04
27	GO:0005516: calmodulin binding	1.01E-03
28	GO:0033612: receptor serine/threonine kinase binding	1.04E-03
29	GO:0019201: nucleotide kinase activity	1.08E-03
30	GO:0015181: arginine transmembrane transporter activity	1.08E-03
31	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	1.08E-03
32	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.08E-03
33	GO:0015189: L-lysine transmembrane transporter activity	1.08E-03
34	GO:0005313: L-glutamate transmembrane transporter activity	1.44E-03
35	GO:0043531: ADP binding	1.46E-03
36	GO:0047631: ADP-ribose diphosphatase activity	1.83E-03
37	GO:0045431: flavonol synthase activity	1.83E-03
38	GO:0010294: abscisic acid glucosyltransferase activity	1.83E-03
39	GO:0000210: NAD+ diphosphatase activity	2.26E-03
40	GO:0035252: UDP-xylosyltransferase activity	2.26E-03
41	GO:0008519: ammonium transmembrane transporter activity	2.26E-03
42	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.26E-03
43	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.66E-03
44	GO:0004017: adenylate kinase activity	2.71E-03
45	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.32E-03
46	GO:0004683: calmodulin-dependent protein kinase activity	3.50E-03
47	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.71E-03
48	GO:0004430: 1-phosphatidylinositol 4-kinase activity	4.24E-03
49	GO:0071949: FAD binding	4.80E-03
50	GO:0015174: basic amino acid transmembrane transporter activity	5.38E-03
51	GO:0008047: enzyme activator activity	5.99E-03
52	GO:0008559: xenobiotic-transporting ATPase activity	6.62E-03
53	GO:0008378: galactosyltransferase activity	7.28E-03
54	GO:0031072: heat shock protein binding	7.96E-03
55	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	8.66E-03
56	GO:0030553: cGMP binding	9.37E-03
57	GO:0008061: chitin binding	9.37E-03
58	GO:0004190: aspartic-type endopeptidase activity	9.37E-03
59	GO:0030552: cAMP binding	9.37E-03
60	GO:0015171: amino acid transmembrane transporter activity	9.46E-03
61	GO:0031625: ubiquitin protein ligase binding	9.46E-03
62	GO:0008234: cysteine-type peptidase activity	9.46E-03
63	GO:0043130: ubiquitin binding	1.09E-02
64	GO:0005216: ion channel activity	1.17E-02
65	GO:0015035: protein disulfide oxidoreductase activity	1.25E-02
66	GO:0003756: protein disulfide isomerase activity	1.50E-02
67	GO:0005525: GTP binding	1.62E-02
68	GO:0030551: cyclic nucleotide binding	1.68E-02
69	GO:0005249: voltage-gated potassium channel activity	1.68E-02
70	GO:0043565: sequence-specific DNA binding	1.71E-02
71	GO:0003713: transcription coactivator activity	1.77E-02
72	GO:0010181: FMN binding	1.86E-02
73	GO:0005509: calcium ion binding	1.95E-02
74	GO:0044212: transcription regulatory region DNA binding	2.20E-02
75	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.25E-02
76	GO:0051015: actin filament binding	2.25E-02
77	GO:0004806: triglyceride lipase activity	3.00E-02
78	GO:0004721: phosphoprotein phosphatase activity	3.00E-02
79	GO:0046982: protein heterodimerization activity	3.21E-02
80	GO:0015238: drug transmembrane transporter activity	3.34E-02
81	GO:0004497: monooxygenase activity	4.04E-02
82	GO:0000149: SNARE binding	4.07E-02
83	GO:0030246: carbohydrate binding	4.23E-02
84	GO:0005484: SNAP receptor activity	4.57E-02
85	GO:0051537: 2 iron, 2 sulfur cluster binding	4.84E-02
86	GO:0005198: structural molecule activity	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.02E-09
2	GO:0005911: cell-cell junction	2.09E-04
3	GO:0005953: CAAX-protein geranylgeranyltransferase complex	2.09E-04
4	GO:0005901: caveola	4.66E-04
5	GO:0030139: endocytic vesicle	7.59E-04
6	GO:0016021: integral component of membrane	9.26E-04
7	GO:0012505: endomembrane system	1.83E-03
8	GO:0000815: ESCRT III complex	2.71E-03
9	GO:0005768: endosome	5.38E-03
10	GO:0030125: clathrin vesicle coat	5.99E-03
11	GO:0005795: Golgi stack	9.37E-03
12	GO:0043234: protein complex	1.01E-02
13	GO:0010008: endosome membrane	1.04E-02
14	GO:0005758: mitochondrial intermembrane space	1.09E-02
15	GO:0005905: clathrin-coated pit	1.25E-02
16	GO:0030136: clathrin-coated vesicle	1.59E-02
17	GO:0009504: cell plate	1.96E-02
18	GO:0005887: integral component of plasma membrane	2.10E-02
19	GO:0000145: exocyst	2.15E-02
20	GO:0046658: anchored component of plasma membrane	2.80E-02
21	GO:0019005: SCF ubiquitin ligase complex	3.23E-02
22	GO:0000325: plant-type vacuole	3.58E-02
23	GO:0031201: SNARE complex	4.32E-02
24	GO:0031902: late endosome membrane	4.32E-02
25	GO:0090406: pollen tube	4.57E-02