co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G29720

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032499: detection of peptidoglycan	0.00E+00
2	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
3	GO:0002764: immune response-regulating signaling pathway	0.00E+00
4	GO:0006468: protein phosphorylation	4.20E-10
5	GO:0046777: protein autophosphorylation	1.79E-06
6	GO:0000187: activation of MAPK activity	1.11E-05
7	GO:0080142: regulation of salicylic acid biosynthetic process	2.06E-05
8	GO:0060548: negative regulation of cell death	2.06E-05
9	GO:0009617: response to bacterium	6.34E-05
10	GO:2000037: regulation of stomatal complex patterning	6.99E-05
11	GO:0032491: detection of molecule of fungal origin	1.62E-04
12	GO:0034975: protein folding in endoplasmic reticulum	1.62E-04
13	GO:0010365: positive regulation of ethylene biosynthetic process	1.62E-04
14	GO:0051245: negative regulation of cellular defense response	1.62E-04
15	GO:0010941: regulation of cell death	1.62E-04
16	GO:0019673: GDP-mannose metabolic process	1.62E-04
17	GO:0010200: response to chitin	1.84E-04
18	GO:0042742: defense response to bacterium	2.13E-04
19	GO:0035556: intracellular signal transduction	2.36E-04
20	GO:0009817: defense response to fungus, incompatible interaction	2.86E-04
21	GO:0010541: acropetal auxin transport	3.69E-04
22	GO:0019725: cellular homeostasis	3.69E-04
23	GO:0002221: pattern recognition receptor signaling pathway	3.69E-04
24	GO:0046939: nucleotide phosphorylation	3.69E-04
25	GO:0080185: effector dependent induction by symbiont of host immune response	3.69E-04
26	GO:1902066: regulation of cell wall pectin metabolic process	3.69E-04
27	GO:0007584: response to nutrient	3.69E-04
28	GO:0031349: positive regulation of defense response	3.69E-04
29	GO:0010229: inflorescence development	3.96E-04
30	GO:0007034: vacuolar transport	4.47E-04
31	GO:0010359: regulation of anion channel activity	6.04E-04
32	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	6.04E-04
33	GO:0051176: positive regulation of sulfur metabolic process	6.04E-04
34	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	6.04E-04
35	GO:0010498: proteasomal protein catabolic process	6.04E-04
36	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	6.04E-04
37	GO:1901672: positive regulation of systemic acquired resistance	6.04E-04
38	GO:0048586: regulation of long-day photoperiodism, flowering	6.04E-04
39	GO:0032922: circadian regulation of gene expression	6.04E-04
40	GO:0016045: detection of bacterium	6.04E-04
41	GO:1900140: regulation of seedling development	6.04E-04
42	GO:0006487: protein N-linked glycosylation	6.16E-04
43	GO:0031348: negative regulation of defense response	8.11E-04
44	GO:0009814: defense response, incompatible interaction	8.11E-04
45	GO:0016226: iron-sulfur cluster assembly	8.11E-04
46	GO:2000022: regulation of jasmonic acid mediated signaling pathway	8.11E-04
47	GO:0071323: cellular response to chitin	8.63E-04
48	GO:0010104: regulation of ethylene-activated signaling pathway	8.63E-04
49	GO:0072583: clathrin-dependent endocytosis	8.63E-04
50	GO:0010306: rhamnogalacturonan II biosynthetic process	8.63E-04
51	GO:0006612: protein targeting to membrane	8.63E-04
52	GO:0010227: floral organ abscission	8.83E-04
53	GO:0009626: plant-type hypersensitive response	1.05E-03
54	GO:0010363: regulation of plant-type hypersensitive response	1.14E-03
55	GO:0010107: potassium ion import	1.14E-03
56	GO:0071219: cellular response to molecule of bacterial origin	1.14E-03
57	GO:2000038: regulation of stomatal complex development	1.14E-03
58	GO:0009737: response to abscisic acid	1.19E-03
59	GO:0018344: protein geranylgeranylation	1.45E-03
60	GO:0009697: salicylic acid biosynthetic process	1.45E-03
61	GO:0010405: arabinogalactan protein metabolic process	1.78E-03
62	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.78E-03
63	GO:1900425: negative regulation of defense response to bacterium	1.78E-03
64	GO:0009751: response to salicylic acid	1.82E-03
65	GO:0006904: vesicle docking involved in exocytosis	1.88E-03
66	GO:0010555: response to mannitol	2.14E-03
67	GO:2000067: regulation of root morphogenesis	2.14E-03
68	GO:0009094: L-phenylalanine biosynthetic process	2.14E-03
69	GO:0009423: chorismate biosynthetic process	2.14E-03
70	GO:0009816: defense response to bacterium, incompatible interaction	2.22E-03
71	GO:0010161: red light signaling pathway	2.52E-03
72	GO:1900056: negative regulation of leaf senescence	2.52E-03
73	GO:0070370: cellular heat acclimation	2.52E-03
74	GO:0006470: protein dephosphorylation	2.87E-03
75	GO:0045010: actin nucleation	2.91E-03
76	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.91E-03
77	GO:0030162: regulation of proteolysis	2.91E-03
78	GO:0006491: N-glycan processing	2.91E-03
79	GO:0006499: N-terminal protein myristoylation	3.01E-03
80	GO:0010204: defense response signaling pathway, resistance gene-independent	3.33E-03
81	GO:0009932: cell tip growth	3.33E-03
82	GO:0007186: G-protein coupled receptor signaling pathway	3.33E-03
83	GO:0006952: defense response	3.40E-03
84	GO:0009867: jasmonic acid mediated signaling pathway	3.46E-03
85	GO:0010112: regulation of systemic acquired resistance	3.77E-03
86	GO:0090333: regulation of stomatal closure	3.77E-03
87	GO:0006887: exocytosis	4.10E-03
88	GO:0048354: mucilage biosynthetic process involved in seed coat development	4.22E-03
89	GO:0006970: response to osmotic stress	4.63E-03
90	GO:0043069: negative regulation of programmed cell death	4.69E-03
91	GO:0009750: response to fructose	5.19E-03
92	GO:0009073: aromatic amino acid family biosynthetic process	5.19E-03
93	GO:0015031: protein transport	5.28E-03
94	GO:0000165: MAPK cascade	5.38E-03
95	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	5.38E-03
96	GO:0006486: protein glycosylation	5.99E-03
97	GO:0055046: microgametogenesis	6.22E-03
98	GO:0009785: blue light signaling pathway	6.22E-03
99	GO:0009909: regulation of flower development	6.63E-03
100	GO:0009266: response to temperature stimulus	6.76E-03
101	GO:0034605: cellular response to heat	6.76E-03
102	GO:0002237: response to molecule of bacterial origin	6.76E-03
103	GO:0070588: calcium ion transmembrane transport	7.32E-03
104	GO:0046854: phosphatidylinositol phosphorylation	7.32E-03
105	GO:0009620: response to fungus	7.78E-03
106	GO:0009863: salicylic acid mediated signaling pathway	8.48E-03
107	GO:0018105: peptidyl-serine phosphorylation	8.78E-03
108	GO:0009408: response to heat	9.08E-03
109	GO:0009695: jasmonic acid biosynthetic process	9.09E-03
110	GO:0009651: response to salt stress	9.70E-03
111	GO:0048278: vesicle docking	9.72E-03
112	GO:0071456: cellular response to hypoxia	1.04E-02
113	GO:0010017: red or far-red light signaling pathway	1.04E-02
114	GO:0009306: protein secretion	1.17E-02
115	GO:0009561: megagametogenesis	1.17E-02
116	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.24E-02
117	GO:0007165: signal transduction	1.24E-02
118	GO:0009414: response to water deprivation	1.25E-02
119	GO:0010118: stomatal movement	1.31E-02
120	GO:0042391: regulation of membrane potential	1.31E-02
121	GO:0006885: regulation of pH	1.38E-02
122	GO:0048544: recognition of pollen	1.45E-02
123	GO:0061025: membrane fusion	1.45E-02
124	GO:0009749: response to glucose	1.52E-02
125	GO:0006891: intra-Golgi vesicle-mediated transport	1.60E-02
126	GO:0002229: defense response to oomycetes	1.60E-02
127	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.65E-02
128	GO:0009739: response to gibberellin	1.65E-02
129	GO:0007166: cell surface receptor signaling pathway	1.69E-02
130	GO:0030163: protein catabolic process	1.75E-02
131	GO:0006464: cellular protein modification process	1.83E-02
132	GO:0000910: cytokinesis	1.99E-02
133	GO:0009409: response to cold	2.03E-02
134	GO:0009615: response to virus	2.07E-02
135	GO:0009911: positive regulation of flower development	2.07E-02
136	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.16E-02
137	GO:0009627: systemic acquired resistance	2.24E-02
138	GO:0006906: vesicle fusion	2.24E-02
139	GO:0050832: defense response to fungus	2.28E-02
140	GO:0048573: photoperiodism, flowering	2.33E-02
141	GO:0008219: cell death	2.51E-02
142	GO:0009813: flavonoid biosynthetic process	2.60E-02
143	GO:0007568: aging	2.78E-02
144	GO:0009631: cold acclimation	2.78E-02
145	GO:0048527: lateral root development	2.78E-02
146	GO:0010119: regulation of stomatal movement	2.78E-02
147	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.94E-02
148	GO:0045087: innate immune response	2.97E-02
149	GO:0006886: intracellular protein transport	3.51E-02
150	GO:0009744: response to sucrose	3.55E-02
151	GO:0051707: response to other organism	3.55E-02
152	GO:0009640: photomorphogenesis	3.55E-02
153	GO:0000209: protein polyubiquitination	3.66E-02
154	GO:0006855: drug transmembrane transport	3.97E-02
155	GO:0006812: cation transport	4.18E-02
156	GO:0048364: root development	4.36E-02
157	GO:0006813: potassium ion transport	4.39E-02
158	GO:0009753: response to jasmonic acid	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:2001080: chitosan binding	0.00E+00
2	GO:0005522: profilin binding	0.00E+00
3	GO:0004107: chorismate synthase activity	0.00E+00
4	GO:0016301: kinase activity	1.21E-10
5	GO:0005524: ATP binding	2.20E-09
6	GO:0004674: protein serine/threonine kinase activity	6.00E-08
7	GO:0019199: transmembrane receptor protein kinase activity	2.06E-05
8	GO:0005515: protein binding	2.60E-05
9	GO:0004708: MAP kinase kinase activity	1.20E-04
10	GO:0004672: protein kinase activity	1.23E-04
11	GO:0032050: clathrin heavy chain binding	1.62E-04
12	GO:1901149: salicylic acid binding	1.62E-04
13	GO:0004662: CAAX-protein geranylgeranyltransferase activity	1.62E-04
14	GO:0015085: calcium ion transmembrane transporter activity	1.62E-04
15	GO:0008446: GDP-mannose 4,6-dehydratase activity	1.62E-04
16	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.42E-04
17	GO:0005525: GTP binding	5.96E-04
18	GO:0046423: allene-oxide cyclase activity	6.04E-04
19	GO:0001664: G-protein coupled receptor binding	6.04E-04
20	GO:0031683: G-protein beta/gamma-subunit complex binding	6.04E-04
21	GO:0033612: receptor serine/threonine kinase binding	7.44E-04
22	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	8.63E-04
23	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	8.63E-04
24	GO:0019201: nucleotide kinase activity	8.63E-04
25	GO:0047769: arogenate dehydratase activity	1.14E-03
26	GO:0004664: prephenate dehydratase activity	1.14E-03
27	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.45E-03
28	GO:0045431: flavonol synthase activity	1.45E-03
29	GO:0035252: UDP-xylosyltransferase activity	1.78E-03
30	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.78E-03
31	GO:0003924: GTPase activity	1.86E-03
32	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.88E-03
33	GO:0005516: calmodulin binding	2.06E-03
34	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	2.14E-03
35	GO:0004559: alpha-mannosidase activity	2.14E-03
36	GO:0004017: adenylate kinase activity	2.14E-03
37	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.35E-03
38	GO:0008375: acetylglucosaminyltransferase activity	2.35E-03
39	GO:0004683: calmodulin-dependent protein kinase activity	2.47E-03
40	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.91E-03
41	GO:0005267: potassium channel activity	3.33E-03
42	GO:0004430: 1-phosphatidylinositol 4-kinase activity	3.33E-03
43	GO:0008047: enzyme activator activity	4.69E-03
44	GO:0004713: protein tyrosine kinase activity	4.69E-03
45	GO:0043531: ADP binding	4.73E-03
46	GO:0008559: xenobiotic-transporting ATPase activity	5.19E-03
47	GO:0005543: phospholipid binding	5.19E-03
48	GO:0008378: galactosyltransferase activity	5.69E-03
49	GO:0031072: heat shock protein binding	6.22E-03
50	GO:0005388: calcium-transporting ATPase activity	6.22E-03
51	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	6.22E-03
52	GO:0031625: ubiquitin protein ligase binding	6.63E-03
53	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	6.76E-03
54	GO:0004190: aspartic-type endopeptidase activity	7.32E-03
55	GO:0030552: cAMP binding	7.32E-03
56	GO:0030553: cGMP binding	7.32E-03
57	GO:0008061: chitin binding	7.32E-03
58	GO:0004871: signal transducer activity	7.38E-03
59	GO:0004722: protein serine/threonine phosphatase activity	7.82E-03
60	GO:0043565: sequence-specific DNA binding	7.97E-03
61	GO:0043424: protein histidine kinase binding	9.09E-03
62	GO:0005216: ion channel activity	9.09E-03
63	GO:0019706: protein-cysteine S-palmitoyltransferase activity	9.72E-03
64	GO:0005509: calcium ion binding	1.14E-02
65	GO:0003756: protein disulfide isomerase activity	1.17E-02
66	GO:0008565: protein transporter activity	1.28E-02
67	GO:0005451: monovalent cation:proton antiporter activity	1.31E-02
68	GO:0005249: voltage-gated potassium channel activity	1.31E-02
69	GO:0030551: cyclic nucleotide binding	1.31E-02
70	GO:0015299: solute:proton antiporter activity	1.45E-02
71	GO:0010181: FMN binding	1.45E-02
72	GO:0046872: metal ion binding	1.52E-02
73	GO:0015385: sodium:proton antiporter activity	1.75E-02
74	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.75E-02
75	GO:0051015: actin filament binding	1.75E-02
76	GO:0016597: amino acid binding	1.99E-02
77	GO:0004721: phosphoprotein phosphatase activity	2.33E-02
78	GO:0015238: drug transmembrane transporter activity	2.60E-02
79	GO:0030246: carbohydrate binding	2.73E-02
80	GO:0000149: SNARE binding	3.16E-02
81	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.16E-02
82	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	3.40E-02
83	GO:0005484: SNAP receptor activity	3.55E-02
84	GO:0051537: 2 iron, 2 sulfur cluster binding	3.76E-02
85	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	3.78E-02
86	GO:0005198: structural molecule activity	3.86E-02
87	GO:0008234: cysteine-type peptidase activity	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	2.10E-11
2	GO:0005911: cell-cell junction	1.62E-04
3	GO:0005953: CAAX-protein geranylgeranyltransferase complex	1.62E-04
4	GO:0005901: caveola	3.69E-04
5	GO:0030139: endocytic vesicle	6.04E-04
6	GO:0000815: ESCRT III complex	2.14E-03
7	GO:0005768: endosome	2.88E-03
8	GO:0030125: clathrin vesicle coat	4.69E-03
9	GO:0090404: pollen tube tip	5.19E-03
10	GO:0005795: Golgi stack	7.32E-03
11	GO:0005834: heterotrimeric G-protein complex	7.54E-03
12	GO:0012505: endomembrane system	8.27E-03
13	GO:0005758: mitochondrial intermembrane space	8.48E-03
14	GO:0016021: integral component of membrane	9.72E-03
15	GO:0005774: vacuolar membrane	1.03E-02
16	GO:0005770: late endosome	1.38E-02
17	GO:0009504: cell plate	1.52E-02
18	GO:0000145: exocyst	1.67E-02
19	GO:0046658: anchored component of plasma membrane	1.96E-02
20	GO:0005794: Golgi apparatus	2.25E-02
21	GO:0019005: SCF ubiquitin ligase complex	2.51E-02
22	GO:0000325: plant-type vacuole	2.78E-02
23	GO:0031201: SNARE complex	3.35E-02
24	GO:0031902: late endosome membrane	3.35E-02
25	GO:0090406: pollen tube	3.55E-02
26	GO:0005635: nuclear envelope	4.61E-02