co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G29470

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0097237: cellular response to toxic substance	0.00E+00
2	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
3	GO:0002376: immune system process	0.00E+00
4	GO:0030149: sphingolipid catabolic process	0.00E+00
5	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
6	GO:0000188: inactivation of MAPK activity	0.00E+00
7	GO:0000162: tryptophan biosynthetic process	3.04E-07
8	GO:0010311: lateral root formation	4.26E-07
9	GO:0009407: toxin catabolic process	1.52E-05
10	GO:0010600: regulation of auxin biosynthetic process	1.67E-05
11	GO:0009617: response to bacterium	4.32E-05
12	GO:0009851: auxin biosynthetic process	8.23E-05
13	GO:0010230: alternative respiration	1.44E-04
14	GO:1900384: regulation of flavonol biosynthetic process	1.44E-04
15	GO:0052544: defense response by callose deposition in cell wall	2.54E-04
16	GO:0019632: shikimate metabolic process	3.29E-04
17	GO:0015865: purine nucleotide transport	3.29E-04
18	GO:0019752: carboxylic acid metabolic process	3.29E-04
19	GO:1902000: homogentisate catabolic process	3.29E-04
20	GO:0050684: regulation of mRNA processing	3.29E-04
21	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	5.40E-04
22	GO:0002230: positive regulation of defense response to virus by host	5.40E-04
23	GO:0032784: regulation of DNA-templated transcription, elongation	5.40E-04
24	GO:0010366: negative regulation of ethylene biosynthetic process	5.40E-04
25	GO:0009072: aromatic amino acid family metabolic process	5.40E-04
26	GO:0006012: galactose metabolic process	7.50E-04
27	GO:0046902: regulation of mitochondrial membrane permeability	7.73E-04
28	GO:1902290: positive regulation of defense response to oomycetes	7.73E-04
29	GO:0006520: cellular amino acid metabolic process	1.01E-03
30	GO:0048830: adventitious root development	1.02E-03
31	GO:0033358: UDP-L-arabinose biosynthetic process	1.02E-03
32	GO:0006621: protein retention in ER lumen	1.02E-03
33	GO:0010188: response to microbial phytotoxin	1.02E-03
34	GO:0045227: capsule polysaccharide biosynthetic process	1.02E-03
35	GO:0006623: protein targeting to vacuole	1.16E-03
36	GO:0006891: intra-Golgi vesicle-mediated transport	1.24E-03
37	GO:0009164: nucleoside catabolic process	1.29E-03
38	GO:0000304: response to singlet oxygen	1.29E-03
39	GO:0046283: anthocyanin-containing compound metabolic process	1.29E-03
40	GO:0006564: L-serine biosynthetic process	1.29E-03
41	GO:0031365: N-terminal protein amino acid modification	1.29E-03
42	GO:0010225: response to UV-C	1.29E-03
43	GO:0009630: gravitropism	1.32E-03
44	GO:0002238: response to molecule of fungal origin	1.59E-03
45	GO:0009759: indole glucosinolate biosynthetic process	1.59E-03
46	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.59E-03
47	GO:0008152: metabolic process	1.66E-03
48	GO:0050832: defense response to fungus	1.68E-03
49	GO:0009423: chorismate biosynthetic process	1.91E-03
50	GO:1900056: negative regulation of leaf senescence	2.24E-03
51	GO:0080186: developmental vegetative growth	2.24E-03
52	GO:0050829: defense response to Gram-negative bacterium	2.24E-03
53	GO:1900057: positive regulation of leaf senescence	2.24E-03
54	GO:0055114: oxidation-reduction process	2.32E-03
55	GO:0042742: defense response to bacterium	2.56E-03
56	GO:0006979: response to oxidative stress	2.60E-03
57	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.60E-03
58	GO:0030091: protein repair	2.60E-03
59	GO:0043068: positive regulation of programmed cell death	2.60E-03
60	GO:0010497: plasmodesmata-mediated intercellular transport	2.96E-03
61	GO:0030968: endoplasmic reticulum unfolded protein response	2.96E-03
62	GO:0051865: protein autoubiquitination	3.35E-03
63	GO:0010112: regulation of systemic acquired resistance	3.35E-03
64	GO:0009835: fruit ripening	3.35E-03
65	GO:0046685: response to arsenic-containing substance	3.35E-03
66	GO:0009638: phototropism	3.76E-03
67	GO:2000280: regulation of root development	3.76E-03
68	GO:1900426: positive regulation of defense response to bacterium	3.76E-03
69	GO:0009723: response to ethylene	4.07E-03
70	GO:0009641: shade avoidance	4.18E-03
71	GO:0009636: response to toxic substance	4.22E-03
72	GO:0009682: induced systemic resistance	4.61E-03
73	GO:0009073: aromatic amino acid family biosynthetic process	4.61E-03
74	GO:0009684: indoleacetic acid biosynthetic process	4.61E-03
75	GO:0010200: response to chitin	4.64E-03
76	GO:0006812: cation transport	4.70E-03
77	GO:0006813: potassium ion transport	5.05E-03
78	GO:0012501: programmed cell death	5.06E-03
79	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	5.06E-03
80	GO:0009785: blue light signaling pathway	5.52E-03
81	GO:2000028: regulation of photoperiodism, flowering	5.52E-03
82	GO:0006541: glutamine metabolic process	6.00E-03
83	GO:0002237: response to molecule of bacterial origin	6.00E-03
84	GO:0042343: indole glucosinolate metabolic process	6.50E-03
85	GO:0009225: nucleotide-sugar metabolic process	6.50E-03
86	GO:0006952: defense response	6.52E-03
87	GO:0080147: root hair cell development	7.52E-03
88	GO:0006874: cellular calcium ion homeostasis	8.06E-03
89	GO:0043622: cortical microtubule organization	8.06E-03
90	GO:0051302: regulation of cell division	8.06E-03
91	GO:0016998: cell wall macromolecule catabolic process	8.61E-03
92	GO:0048511: rhythmic process	8.61E-03
93	GO:0098542: defense response to other organism	8.61E-03
94	GO:0009814: defense response, incompatible interaction	9.17E-03
95	GO:0009693: ethylene biosynthetic process	9.75E-03
96	GO:0042147: retrograde transport, endosome to Golgi	1.09E-02
97	GO:0008284: positive regulation of cell proliferation	1.09E-02
98	GO:0042391: regulation of membrane potential	1.16E-02
99	GO:0040008: regulation of growth	1.19E-02
100	GO:0006885: regulation of pH	1.22E-02
101	GO:0006662: glycerol ether metabolic process	1.22E-02
102	GO:0046323: glucose import	1.22E-02
103	GO:0006814: sodium ion transport	1.28E-02
104	GO:0010183: pollen tube guidance	1.35E-02
105	GO:0000302: response to reactive oxygen species	1.41E-02
106	GO:0015031: protein transport	1.43E-02
107	GO:0009611: response to wounding	1.56E-02
108	GO:0006508: proteolysis	1.80E-02
109	GO:0009615: response to virus	1.84E-02
110	GO:0046686: response to cadmium ion	1.94E-02
111	GO:0006974: cellular response to DNA damage stimulus	1.99E-02
112	GO:0009627: systemic acquired resistance	1.99E-02
113	GO:0009651: response to salt stress	2.09E-02
114	GO:0009817: defense response to fungus, incompatible interaction	2.22E-02
115	GO:0009813: flavonoid biosynthetic process	2.30E-02
116	GO:0048527: lateral root development	2.46E-02
117	GO:0010043: response to zinc ion	2.46E-02
118	GO:0007568: aging	2.46E-02
119	GO:0034599: cellular response to oxidative stress	2.71E-02
120	GO:0045454: cell redox homeostasis	2.87E-02
121	GO:0006839: mitochondrial transport	2.88E-02
122	GO:0006886: intracellular protein transport	2.96E-02
123	GO:0042542: response to hydrogen peroxide	3.06E-02
124	GO:0010114: response to red light	3.15E-02
125	GO:0009965: leaf morphogenesis	3.42E-02
126	GO:0009751: response to salicylic acid	3.48E-02
127	GO:0006629: lipid metabolic process	3.53E-02
128	GO:0031347: regulation of defense response	3.60E-02
129	GO:0016310: phosphorylation	3.78E-02
130	GO:0009753: response to jasmonic acid	3.78E-02
131	GO:0009809: lignin biosynthetic process	3.89E-02
132	GO:0009736: cytokinin-activated signaling pathway	3.89E-02
133	GO:0010224: response to UV-B	3.98E-02
134	GO:0009909: regulation of flower development	4.18E-02
135	GO:0009620: response to fungus	4.68E-02
136	GO:0042545: cell wall modification	4.89E-02
137	GO:0009734: auxin-activated signaling pathway	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0051670: inulinase activity	0.00E+00
2	GO:0004764: shikimate 3-dehydrogenase (NADP+) activity	0.00E+00
3	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
4	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
5	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
6	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
7	GO:0003855: 3-dehydroquinate dehydratase activity	0.00E+00
8	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
9	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
10	GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity	0.00E+00
11	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
12	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
13	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
14	GO:0004049: anthranilate synthase activity	3.82E-06
15	GO:0004364: glutathione transferase activity	3.11E-05
16	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.44E-04
17	GO:0051669: fructan beta-fructosidase activity	1.44E-04
18	GO:0047326: inositol tetrakisphosphate 5-kinase activity	1.44E-04
19	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	1.44E-04
20	GO:0000386: second spliceosomal transesterification activity	1.44E-04
21	GO:0031219: levanase activity	1.44E-04
22	GO:0015168: glycerol transmembrane transporter activity	1.44E-04
23	GO:2001147: camalexin binding	1.44E-04
24	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	1.44E-04
25	GO:0004649: poly(ADP-ribose) glycohydrolase activity	1.44E-04
26	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	1.44E-04
27	GO:0010179: IAA-Ala conjugate hydrolase activity	1.44E-04
28	GO:2001227: quercitrin binding	1.44E-04
29	GO:0000824: inositol tetrakisphosphate 3-kinase activity	1.44E-04
30	GO:0019172: glyoxalase III activity	3.29E-04
31	GO:0043169: cation binding	5.40E-04
32	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	5.40E-04
33	GO:0004601: peroxidase activity	5.76E-04
34	GO:0005354: galactose transmembrane transporter activity	7.73E-04
35	GO:0005432: calcium:sodium antiporter activity	7.73E-04
36	GO:0010178: IAA-amino acid conjugate hydrolase activity	7.73E-04
37	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	7.73E-04
38	GO:0046923: ER retention sequence binding	1.02E-03
39	GO:0009916: alternative oxidase activity	1.02E-03
40	GO:0050373: UDP-arabinose 4-epimerase activity	1.02E-03
41	GO:0004834: tryptophan synthase activity	1.02E-03
42	GO:0015145: monosaccharide transmembrane transporter activity	1.29E-03
43	GO:0005471: ATP:ADP antiporter activity	1.29E-03
44	GO:0030170: pyridoxal phosphate binding	1.48E-03
45	GO:0008237: metallopeptidase activity	1.59E-03
46	GO:0008200: ion channel inhibitor activity	1.59E-03
47	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.91E-03
48	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	1.91E-03
49	GO:0003978: UDP-glucose 4-epimerase activity	1.91E-03
50	GO:0004602: glutathione peroxidase activity	1.91E-03
51	GO:0004656: procollagen-proline 4-dioxygenase activity	1.91E-03
52	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	1.91E-03
53	GO:0051920: peroxiredoxin activity	1.91E-03
54	GO:0004806: triglyceride lipase activity	2.09E-03
55	GO:0016621: cinnamoyl-CoA reductase activity	2.24E-03
56	GO:0043295: glutathione binding	2.24E-03
57	GO:0016831: carboxy-lyase activity	2.24E-03
58	GO:0008235: metalloexopeptidase activity	2.24E-03
59	GO:0004034: aldose 1-epimerase activity	2.60E-03
60	GO:0015491: cation:cation antiporter activity	2.60E-03
61	GO:0016209: antioxidant activity	2.60E-03
62	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	2.60E-03
63	GO:0004177: aminopeptidase activity	4.61E-03
64	GO:0031072: heat shock protein binding	5.52E-03
65	GO:0005217: intracellular ligand-gated ion channel activity	6.50E-03
66	GO:0004970: ionotropic glutamate receptor activity	6.50E-03
67	GO:0030552: cAMP binding	6.50E-03
68	GO:0004867: serine-type endopeptidase inhibitor activity	6.50E-03
69	GO:0030553: cGMP binding	6.50E-03
70	GO:0004725: protein tyrosine phosphatase activity	7.00E-03
71	GO:0015035: protein disulfide oxidoreductase activity	7.39E-03
72	GO:0005216: ion channel activity	8.06E-03
73	GO:0003727: single-stranded RNA binding	1.03E-02
74	GO:0047134: protein-disulfide reductase activity	1.09E-02
75	GO:0030551: cyclic nucleotide binding	1.16E-02
76	GO:0005451: monovalent cation:proton antiporter activity	1.16E-02
77	GO:0005249: voltage-gated potassium channel activity	1.16E-02
78	GO:0015299: solute:proton antiporter activity	1.28E-02
79	GO:0005355: glucose transmembrane transporter activity	1.28E-02
80	GO:0004791: thioredoxin-disulfide reductase activity	1.28E-02
81	GO:0016853: isomerase activity	1.28E-02
82	GO:0004872: receptor activity	1.35E-02
83	GO:0015385: sodium:proton antiporter activity	1.55E-02
84	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.55E-02
85	GO:0008483: transaminase activity	1.69E-02
86	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.69E-02
87	GO:0051213: dioxygenase activity	1.84E-02
88	GO:0030247: polysaccharide binding	2.06E-02
89	GO:0004683: calmodulin-dependent protein kinase activity	2.06E-02
90	GO:0004222: metalloendopeptidase activity	2.38E-02
91	GO:0030145: manganese ion binding	2.46E-02
92	GO:0005516: calmodulin binding	2.53E-02
93	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.63E-02
94	GO:0050661: NADP binding	2.88E-02
95	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.09E-02
96	GO:0016787: hydrolase activity	3.10E-02
97	GO:0005509: calcium ion binding	3.31E-02
98	GO:0005198: structural molecule activity	3.42E-02
99	GO:0046872: metal ion binding	3.91E-02
100	GO:0016298: lipase activity	3.98E-02
101	GO:0003824: catalytic activity	4.10E-02
102	GO:0045330: aspartyl esterase activity	4.18E-02
103	GO:0045735: nutrient reservoir activity	4.38E-02
104	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.68E-02
105	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.68E-02
106	GO:0030599: pectinesterase activity	4.78E-02
107	GO:0051082: unfolded protein binding	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0005950: anthranilate synthase complex	1.02E-06
2	GO:0005788: endoplasmic reticulum lumen	1.88E-03
3	GO:0005783: endoplasmic reticulum	3.88E-03
4	GO:0017119: Golgi transport complex	4.18E-03
5	GO:0031012: extracellular matrix	5.52E-03
6	GO:0005795: Golgi stack	6.50E-03
7	GO:0005886: plasma membrane	6.60E-03
8	GO:0070469: respiratory chain	8.06E-03
9	GO:0005770: late endosome	1.22E-02
10	GO:0031965: nuclear membrane	1.35E-02
11	GO:0009505: plant-type cell wall	1.40E-02
12	GO:0005794: Golgi apparatus	1.47E-02
13	GO:0071944: cell periphery	1.55E-02
14	GO:0032580: Golgi cisterna membrane	1.62E-02
15	GO:0005789: endoplasmic reticulum membrane	1.88E-02
16	GO:0048046: apoplast	2.39E-02
17	GO:0009570: chloroplast stroma	2.50E-02
18	GO:0005802: trans-Golgi network	2.74E-02
19	GO:0005618: cell wall	2.77E-02
20	GO:0090406: pollen tube	3.15E-02
21	GO:0005768: endosome	3.21E-02
22	GO:0005743: mitochondrial inner membrane	3.28E-02
23	GO:0005681: spliceosomal complex	4.38E-02
24	GO:0016021: integral component of membrane	4.47E-02
25	GO:0005887: integral component of plasma membrane	4.77E-02