Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G29100

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010793: regulation of mRNA export from nucleus0.00E+00
2GO:2000636: positive regulation of primary miRNA processing0.00E+00
3GO:0051553: flavone biosynthetic process0.00E+00
4GO:0010055: atrichoblast differentiation0.00E+00
5GO:2000630: positive regulation of miRNA metabolic process0.00E+00
6GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
7GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
8GO:0032107: regulation of response to nutrient levels2.08E-05
9GO:0050684: regulation of mRNA processing5.37E-05
10GO:0032784: regulation of DNA-templated transcription, elongation9.50E-05
11GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway9.50E-05
12GO:0002239: response to oomycetes1.42E-04
13GO:0048527: lateral root development2.30E-04
14GO:0010256: endomembrane system organization3.11E-04
15GO:1900057: positive regulation of leaf senescence4.37E-04
16GO:0000122: negative regulation of transcription from RNA polymerase II promoter4.37E-04
17GO:0006997: nucleus organization5.74E-04
18GO:0010204: defense response signaling pathway, resistance gene-independent5.74E-04
19GO:0009638: phototropism7.18E-04
20GO:0045893: positive regulation of transcription, DNA-templated7.39E-04
21GO:0009870: defense response signaling pathway, resistance gene-dependent7.94E-04
22GO:0009785: blue light signaling pathway1.03E-03
23GO:0009225: nucleotide-sugar metabolic process1.20E-03
24GO:0080188: RNA-directed DNA methylation1.20E-03
25GO:0009617: response to bacterium1.23E-03
26GO:0051302: regulation of cell division1.47E-03
27GO:0042742: defense response to bacterium1.48E-03
28GO:0016226: iron-sulfur cluster assembly1.66E-03
29GO:0071456: cellular response to hypoxia1.66E-03
30GO:0015031: protein transport2.01E-03
31GO:0006623: protein targeting to vacuole2.39E-03
32GO:0000302: response to reactive oxygen species2.50E-03
33GO:0002229: defense response to oomycetes2.50E-03
34GO:0009630: gravitropism2.61E-03
35GO:0009627: systemic acquired resistance3.45E-03
36GO:0009813: flavonoid biosynthetic process3.97E-03
37GO:0010311: lateral root formation3.97E-03
38GO:0051707: response to other organism5.37E-03
39GO:0009636: response to toxic substance5.81E-03
40GO:0009965: leaf morphogenesis5.81E-03
41GO:0009736: cytokinin-activated signaling pathway6.59E-03
42GO:0009626: plant-type hypersensitive response7.73E-03
43GO:0009620: response to fungus7.90E-03
44GO:0009742: brassinosteroid mediated signaling pathway8.77E-03
45GO:0000398: mRNA splicing, via spliceosome9.30E-03
46GO:0009845: seed germination1.04E-02
47GO:0040008: regulation of growth1.20E-02
48GO:0007166: cell surface receptor signaling pathway1.36E-02
49GO:0006970: response to osmotic stress1.77E-02
50GO:0009723: response to ethylene1.87E-02
51GO:0048366: leaf development1.89E-02
52GO:0006468: protein phosphorylation1.98E-02
53GO:0007275: multicellular organism development2.00E-02
54GO:0010200: response to chitin2.01E-02
55GO:0006886: intracellular protein transport2.28E-02
56GO:0009751: response to salicylic acid2.56E-02
57GO:0006351: transcription, DNA-templated3.11E-02
58GO:0009734: auxin-activated signaling pathway3.31E-02
RankGO TermAdjusted P value
1GO:0033759: flavone synthase activity0.00E+00
2GO:0050736: O-malonyltransferase activity5.37E-05
3GO:0032403: protein complex binding9.50E-05
4GO:0030247: polysaccharide binding1.78E-04
5GO:0050378: UDP-glucuronate 4-epimerase activity1.95E-04
6GO:0051536: iron-sulfur cluster binding1.38E-03
7GO:0001046: core promoter sequence-specific DNA binding1.38E-03
8GO:0008810: cellulase activity1.76E-03
9GO:0004499: N,N-dimethylaniline monooxygenase activity1.86E-03
10GO:0050662: coenzyme binding2.28E-03
11GO:0042803: protein homodimerization activity2.43E-03
12GO:0016791: phosphatase activity2.85E-03
13GO:0004721: phosphoprotein phosphatase activity3.58E-03
14GO:0030145: manganese ion binding4.24E-03
15GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.51E-03
16GO:0050661: NADP binding4.93E-03
17GO:0051539: 4 iron, 4 sulfur cluster binding4.93E-03
18GO:0005198: structural molecule activity5.81E-03
19GO:0022857: transmembrane transporter activity8.07E-03
20GO:0005509: calcium ion binding9.35E-03
21GO:0004672: protein kinase activity1.49E-02
22GO:0046982: protein heterodimerization activity1.66E-02
23GO:0050660: flavin adenine dinucleotide binding1.87E-02
24GO:0004497: monooxygenase activity1.96E-02
25GO:0004722: protein serine/threonine phosphatase activity2.38E-02
26GO:0003924: GTPase activity2.59E-02
27GO:0003700: transcription factor activity, sequence-specific DNA binding2.98E-02
28GO:0000166: nucleotide binding3.90E-02
29GO:0016740: transferase activity4.49E-02
30GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.75E-02
31GO:0004674: protein serine/threonine kinase activity4.99E-02
RankGO TermAdjusted P value
1GO:0031965: nuclear membrane9.22E-05
2GO:0005802: trans-Golgi network1.33E-04
3GO:0030658: transport vesicle membrane1.42E-04
4GO:0000813: ESCRT I complex2.51E-04
5GO:0005794: Golgi apparatus2.63E-04
6GO:0015030: Cajal body7.18E-04
7GO:0017119: Golgi transport complex7.94E-04
8GO:0005768: endosome1.30E-03
9GO:0009504: cell plate2.39E-03
10GO:0005789: endoplasmic reticulum membrane2.53E-03
11GO:0032580: Golgi cisterna membrane2.85E-03
12GO:0016021: integral component of membrane5.85E-03
13GO:0005635: nuclear envelope6.91E-03
14GO:0005681: spliceosomal complex7.40E-03
15GO:0009705: plant-type vacuole membrane1.24E-02
16GO:0046658: anchored component of plasma membrane1.51E-02
17GO:0005887: integral component of plasma membrane3.22E-02
<
Gene type



Gene DE type