Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G27800

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1900037: regulation of cellular response to hypoxia0.00E+00
2GO:0042794: rRNA transcription from plastid promoter0.00E+00
3GO:0042255: ribosome assembly2.51E-05
4GO:0006353: DNA-templated transcription, termination2.51E-05
5GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic5.94E-05
6GO:0009686: gibberellin biosynthetic process2.34E-04
7GO:0006518: peptide metabolic process2.46E-04
8GO:0042780: tRNA 3'-end processing2.46E-04
9GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic2.46E-04
10GO:0006655: phosphatidylglycerol biosynthetic process7.40E-04
11GO:0042793: transcription from plastid promoter7.40E-04
12GO:0010190: cytochrome b6f complex assembly7.40E-04
13GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway1.03E-03
14GO:0007050: cell cycle arrest1.03E-03
15GO:0080186: developmental vegetative growth1.03E-03
16GO:0031540: regulation of anthocyanin biosynthetic process1.18E-03
17GO:0048564: photosystem I assembly1.18E-03
18GO:0045292: mRNA cis splicing, via spliceosome1.18E-03
19GO:0007186: G-protein coupled receptor signaling pathway1.35E-03
20GO:0000373: Group II intron splicing1.52E-03
21GO:1900865: chloroplast RNA modification1.69E-03
22GO:0010629: negative regulation of gene expression1.88E-03
23GO:0009740: gibberellic acid mediated signaling pathway2.09E-03
24GO:0016024: CDP-diacylglycerol biosynthetic process2.27E-03
25GO:0010229: inflorescence development2.47E-03
26GO:0009887: animal organ morphogenesis2.68E-03
27GO:0006302: double-strand break repair2.68E-03
28GO:0048467: gynoecium development2.68E-03
29GO:0042023: DNA endoreduplication3.11E-03
30GO:0006863: purine nucleobase transport3.11E-03
31GO:0009416: response to light stimulus3.33E-03
32GO:0006874: cellular calcium ion homeostasis3.57E-03
33GO:0051321: meiotic cell cycle3.81E-03
34GO:0009739: response to gibberellin4.25E-03
35GO:0008380: RNA splicing4.53E-03
36GO:0009658: chloroplast organization5.86E-03
37GO:0008654: phospholipid biosynthetic process5.89E-03
38GO:0032502: developmental process6.46E-03
39GO:0009639: response to red or far red light7.05E-03
40GO:0009567: double fertilization forming a zygote and endosperm7.05E-03
41GO:0010252: auxin homeostasis7.05E-03
42GO:0006974: cellular response to DNA damage stimulus8.60E-03
43GO:0006811: ion transport1.03E-02
44GO:0008283: cell proliferation1.35E-02
45GO:0010114: response to red light1.35E-02
46GO:0006355: regulation of transcription, DNA-templated1.42E-02
47GO:0006364: rRNA processing1.67E-02
48GO:0048367: shoot system development1.93E-02
49GO:0048316: seed development1.93E-02
50GO:0009790: embryo development2.81E-02
51GO:0007623: circadian rhythm3.17E-02
52GO:0009451: RNA modification3.22E-02
53GO:0010228: vegetative to reproductive phase transition of meristem3.28E-02
54GO:0006508: proteolysis3.35E-02
55GO:0006470: protein dephosphorylation3.49E-02
56GO:0042254: ribosome biogenesis4.38E-02
57GO:0009723: response to ethylene4.80E-02
RankGO TermAdjusted P value
1GO:0009899: ent-kaurene synthase activity0.00E+00
2GO:0016707: gibberellin 3-beta-dioxygenase activity2.46E-04
3GO:0042781: 3'-tRNA processing endoribonuclease activity2.46E-04
4GO:0003727: single-stranded RNA binding2.55E-04
5GO:0004930: G-protein coupled receptor activity4.78E-04
6GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity7.40E-04
7GO:0004605: phosphatidate cytidylyltransferase activity7.40E-04
8GO:0003690: double-stranded DNA binding1.63E-03
9GO:0019843: rRNA binding2.77E-03
10GO:0004970: ionotropic glutamate receptor activity2.89E-03
11GO:0005217: intracellular ligand-gated ion channel activity2.89E-03
12GO:0008134: transcription factor binding3.34E-03
13GO:0005345: purine nucleobase transmembrane transporter activity3.57E-03
14GO:0008408: 3'-5' exonuclease activity3.81E-03
15GO:0004518: nuclease activity6.46E-03
16GO:0004871: signal transducer activity9.11E-03
17GO:0004722: protein serine/threonine phosphatase activity9.54E-03
18GO:0004222: metalloendopeptidase activity1.03E-02
19GO:0030145: manganese ion binding1.06E-02
20GO:0004519: endonuclease activity1.17E-02
21GO:0046983: protein dimerization activity1.18E-02
22GO:0008234: cysteine-type peptidase activity1.80E-02
23GO:0008026: ATP-dependent helicase activity2.24E-02
24GO:0003824: catalytic activity4.24E-02
25GO:0000287: magnesium ion binding4.27E-02
26GO:0043531: ADP binding4.62E-02
27GO:0008233: peptidase activity4.98E-02
RankGO TermAdjusted P value
1GO:0000791: euchromatin5.94E-05
2GO:0030870: Mre11 complex1.44E-04
3GO:0000795: synaptonemal complex6.05E-04
4GO:0042644: chloroplast nucleoid1.52E-03
5GO:0000785: chromatin6.46E-03
6GO:0015934: large ribosomal subunit1.06E-02
7GO:0009536: plastid1.06E-02
8GO:0005739: mitochondrion1.12E-02
9GO:0009507: chloroplast1.16E-02
10GO:0005874: microtubule4.92E-02
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Gene type



Gene DE type