co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G27690

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010055: atrichoblast differentiation	0.00E+00
2	GO:0097237: cellular response to toxic substance	0.00E+00
3	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
4	GO:0018063: cytochrome c-heme linkage	0.00E+00
5	GO:0010112: regulation of systemic acquired resistance	4.96E-06
6	GO:0009611: response to wounding	7.30E-06
7	GO:0009620: response to fungus	1.49E-05
8	GO:0040008: regulation of growth	5.92E-05
9	GO:0009693: ethylene biosynthetic process	7.01E-05
10	GO:0009617: response to bacterium	9.61E-05
11	GO:0006680: glucosylceramide catabolic process	1.86E-04
12	GO:0032107: regulation of response to nutrient levels	1.86E-04
13	GO:0019567: arabinose biosynthetic process	1.86E-04
14	GO:0033306: phytol metabolic process	1.86E-04
15	GO:0034214: protein hexamerization	1.86E-04
16	GO:0046246: terpene biosynthetic process	1.86E-04
17	GO:0009835: fruit ripening	2.25E-04
18	GO:0051607: defense response to virus	2.39E-04
19	GO:0055114: oxidation-reduction process	3.17E-04
20	GO:1903507: negative regulation of nucleic acid-templated transcription	3.66E-04
21	GO:0010311: lateral root formation	3.93E-04
22	GO:0019725: cellular homeostasis	4.19E-04
23	GO:0071497: cellular response to freezing	4.19E-04
24	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	4.19E-04
25	GO:0009751: response to salicylic acid	5.05E-04
26	GO:0000162: tryptophan biosynthetic process	6.69E-04
27	GO:0071398: cellular response to fatty acid	6.84E-04
28	GO:0010186: positive regulation of cellular defense response	6.84E-04
29	GO:0010476: gibberellin mediated signaling pathway	6.84E-04
30	GO:0010325: raffinose family oligosaccharide biosynthetic process	6.84E-04
31	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	6.84E-04
32	GO:0006556: S-adenosylmethionine biosynthetic process	6.84E-04
33	GO:0006952: defense response	7.00E-04
34	GO:0046686: response to cadmium ion	9.22E-04
35	GO:2000022: regulation of jasmonic acid mediated signaling pathway	9.73E-04
36	GO:0080024: indolebutyric acid metabolic process	9.77E-04
37	GO:0001676: long-chain fatty acid metabolic process	9.77E-04
38	GO:0010116: positive regulation of abscisic acid biosynthetic process	9.77E-04
39	GO:0070301: cellular response to hydrogen peroxide	9.77E-04
40	GO:0009723: response to ethylene	1.24E-03
41	GO:0010188: response to microbial phytotoxin	1.29E-03
42	GO:0060548: negative regulation of cell death	1.29E-03
43	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	1.29E-03
44	GO:0048830: adventitious root development	1.29E-03
45	GO:0010600: regulation of auxin biosynthetic process	1.29E-03
46	GO:0033356: UDP-L-arabinose metabolic process	1.29E-03
47	GO:1901002: positive regulation of response to salt stress	1.29E-03
48	GO:0015867: ATP transport	1.29E-03
49	GO:0006891: intra-Golgi vesicle-mediated transport	1.77E-03
50	GO:0006635: fatty acid beta-oxidation	1.77E-03
51	GO:0009759: indole glucosinolate biosynthetic process	2.03E-03
52	GO:0015866: ADP transport	2.03E-03
53	GO:0010256: endomembrane system organization	2.03E-03
54	GO:0048444: floral organ morphogenesis	2.43E-03
55	GO:0030643: cellular phosphate ion homeostasis	2.43E-03
56	GO:0009753: response to jasmonic acid	2.77E-03
57	GO:1902074: response to salt	2.87E-03
58	GO:0071669: plant-type cell wall organization or biogenesis	2.87E-03
59	GO:0050829: defense response to Gram-negative bacterium	2.87E-03
60	GO:1900057: positive regulation of leaf senescence	2.87E-03
61	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	2.87E-03
62	GO:0008152: metabolic process	2.89E-03
63	GO:0009817: defense response to fungus, incompatible interaction	3.31E-03
64	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.32E-03
65	GO:0030091: protein repair	3.32E-03
66	GO:0006605: protein targeting	3.32E-03
67	GO:0009813: flavonoid biosynthetic process	3.47E-03
68	GO:0010204: defense response signaling pathway, resistance gene-independent	3.80E-03
69	GO:0017004: cytochrome complex assembly	3.80E-03
70	GO:0048527: lateral root development	3.82E-03
71	GO:0009056: catabolic process	4.30E-03
72	GO:0019432: triglyceride biosynthetic process	4.30E-03
73	GO:0009638: phototropism	4.82E-03
74	GO:0090332: stomatal closure	4.82E-03
75	GO:0042742: defense response to bacterium	4.87E-03
76	GO:0042542: response to hydrogen peroxide	5.18E-03
77	GO:0009641: shade avoidance	5.36E-03
78	GO:0010629: negative regulation of gene expression	5.36E-03
79	GO:0019538: protein metabolic process	5.36E-03
80	GO:0009870: defense response signaling pathway, resistance gene-dependent	5.36E-03
81	GO:0051707: response to other organism	5.39E-03
82	GO:0009737: response to abscisic acid	5.86E-03
83	GO:0009684: indoleacetic acid biosynthetic process	5.92E-03
84	GO:0009682: induced systemic resistance	5.92E-03
85	GO:0052544: defense response by callose deposition in cell wall	5.92E-03
86	GO:0006415: translational termination	5.92E-03
87	GO:0009636: response to toxic substance	6.06E-03
88	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	6.51E-03
89	GO:0071365: cellular response to auxin stimulus	6.51E-03
90	GO:0002213: defense response to insect	6.51E-03
91	GO:0009785: blue light signaling pathway	7.11E-03
92	GO:0009809: lignin biosynthetic process	7.26E-03
93	GO:0045893: positive regulation of transcription, DNA-templated	7.35E-03
94	GO:0015031: protein transport	7.41E-03
95	GO:0090351: seedling development	8.37E-03
96	GO:0042343: indole glucosinolate metabolic process	8.37E-03
97	GO:0009626: plant-type hypersensitive response	9.15E-03
98	GO:0080147: root hair cell development	9.71E-03
99	GO:0051302: regulation of cell division	1.04E-02
100	GO:0006874: cellular calcium ion homeostasis	1.04E-02
101	GO:0009695: jasmonic acid biosynthetic process	1.04E-02
102	GO:0016998: cell wall macromolecule catabolic process	1.11E-02
103	GO:0098542: defense response to other organism	1.11E-02
104	GO:0016114: terpenoid biosynthetic process	1.11E-02
105	GO:0050832: defense response to fungus	1.12E-02
106	GO:0031348: negative regulation of defense response	1.19E-02
107	GO:0071456: cellular response to hypoxia	1.19E-02
108	GO:0030245: cellulose catabolic process	1.19E-02
109	GO:0016226: iron-sulfur cluster assembly	1.19E-02
110	GO:0006730: one-carbon metabolic process	1.19E-02
111	GO:0006012: galactose metabolic process	1.26E-02
112	GO:0009651: response to salt stress	1.41E-02
113	GO:0042147: retrograde transport, endosome to Golgi	1.42E-02
114	GO:0008284: positive regulation of cell proliferation	1.42E-02
115	GO:0006662: glycerol ether metabolic process	1.58E-02
116	GO:0046323: glucose import	1.58E-02
117	GO:0006520: cellular amino acid metabolic process	1.58E-02
118	GO:0048544: recognition of pollen	1.66E-02
119	GO:0006814: sodium ion transport	1.66E-02
120	GO:0009414: response to water deprivation	1.67E-02
121	GO:0009851: auxin biosynthetic process	1.75E-02
122	GO:0006623: protein targeting to vacuole	1.75E-02
123	GO:0010150: leaf senescence	1.79E-02
124	GO:0010193: response to ozone	1.83E-02
125	GO:0000302: response to reactive oxygen species	1.83E-02
126	GO:0009630: gravitropism	1.92E-02
127	GO:0071281: cellular response to iron ion	2.01E-02
128	GO:0019760: glucosinolate metabolic process	2.10E-02
129	GO:0009615: response to virus	2.38E-02
130	GO:0009607: response to biotic stimulus	2.48E-02
131	GO:0010029: regulation of seed germination	2.48E-02
132	GO:0009816: defense response to bacterium, incompatible interaction	2.48E-02
133	GO:0009627: systemic acquired resistance	2.58E-02
134	GO:0016311: dephosphorylation	2.78E-02
135	GO:0008219: cell death	2.88E-02
136	GO:0030244: cellulose biosynthetic process	2.88E-02
137	GO:0009832: plant-type cell wall biogenesis	2.98E-02
138	GO:0006970: response to osmotic stress	2.99E-02
139	GO:0010043: response to zinc ion	3.19E-02
140	GO:0080167: response to karrikin	3.44E-02
141	GO:0034599: cellular response to oxidative stress	3.51E-02
142	GO:0006099: tricarboxylic acid cycle	3.51E-02
143	GO:0044550: secondary metabolite biosynthetic process	3.74E-02
144	GO:0006839: mitochondrial transport	3.74E-02
145	GO:0006631: fatty acid metabolic process	3.85E-02
146	GO:0010114: response to red light	4.08E-02
147	GO:0009965: leaf morphogenesis	4.43E-02
148	GO:0006855: drug transmembrane transport	4.55E-02
149	GO:0031347: regulation of defense response	4.67E-02
150	GO:0006812: cation transport	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
2	GO:0097008: (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity	0.00E+00
3	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
4	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
5	GO:0097007: 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity	0.00E+00
6	GO:0051670: inulinase activity	0.00E+00
7	GO:0047681: aryl-alcohol dehydrogenase (NADP+) activity	0.00E+00
8	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
9	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
10	GO:0052747: sinapyl alcohol dehydrogenase activity	1.48E-04
11	GO:0031219: levanase activity	1.86E-04
12	GO:0015168: glycerol transmembrane transporter activity	1.86E-04
13	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.86E-04
14	GO:0016229: steroid dehydrogenase activity	1.86E-04
15	GO:0010179: IAA-Ala conjugate hydrolase activity	1.86E-04
16	GO:0070401: NADP+ binding	1.86E-04
17	GO:0051669: fructan beta-fructosidase activity	1.86E-04
18	GO:0000386: second spliceosomal transesterification activity	1.86E-04
19	GO:0004348: glucosylceramidase activity	1.86E-04
20	GO:0010331: gibberellin binding	4.19E-04
21	GO:0052691: UDP-arabinopyranose mutase activity	4.19E-04
22	GO:0050736: O-malonyltransferase activity	4.19E-04
23	GO:0045551: cinnamyl-alcohol dehydrogenase activity	4.20E-04
24	GO:0004049: anthranilate synthase activity	6.84E-04
25	GO:0004478: methionine adenosyltransferase activity	6.84E-04
26	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	6.84E-04
27	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	6.84E-04
28	GO:0001046: core promoter sequence-specific DNA binding	7.41E-04
29	GO:0003714: transcription corepressor activity	7.41E-04
30	GO:0010178: IAA-amino acid conjugate hydrolase activity	9.77E-04
31	GO:0016656: monodehydroascorbate reductase (NADH) activity	9.77E-04
32	GO:0005354: galactose transmembrane transporter activity	9.77E-04
33	GO:0005432: calcium:sodium antiporter activity	9.77E-04
34	GO:0008106: alcohol dehydrogenase (NADP+) activity	9.77E-04
35	GO:0016149: translation release factor activity, codon specific	9.77E-04
36	GO:0009916: alternative oxidase activity	1.29E-03
37	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.29E-03
38	GO:0003995: acyl-CoA dehydrogenase activity	1.29E-03
39	GO:0016866: intramolecular transferase activity	1.29E-03
40	GO:0003997: acyl-CoA oxidase activity	1.65E-03
41	GO:0015145: monosaccharide transmembrane transporter activity	1.65E-03
42	GO:0008200: ion channel inhibitor activity	2.03E-03
43	GO:0008237: metallopeptidase activity	2.27E-03
44	GO:0005347: ATP transmembrane transporter activity	2.43E-03
45	GO:0004656: procollagen-proline 4-dioxygenase activity	2.43E-03
46	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.43E-03
47	GO:0015217: ADP transmembrane transporter activity	2.43E-03
48	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.43E-03
49	GO:0102391: decanoate--CoA ligase activity	2.43E-03
50	GO:0004144: diacylglycerol O-acyltransferase activity	2.43E-03
51	GO:0051213: dioxygenase activity	2.54E-03
52	GO:0004467: long-chain fatty acid-CoA ligase activity	2.87E-03
53	GO:0015297: antiporter activity	2.91E-03
54	GO:0015491: cation:cation antiporter activity	3.32E-03
55	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	3.32E-03
56	GO:0004034: aldose 1-epimerase activity	3.32E-03
57	GO:0005544: calcium-dependent phospholipid binding	3.32E-03
58	GO:0004033: aldo-keto reductase (NADP) activity	3.32E-03
59	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	4.30E-03
60	GO:0003747: translation release factor activity	4.30E-03
61	GO:0005198: structural molecule activity	6.06E-03
62	GO:0050660: flavin adenine dinucleotide binding	6.48E-03
63	GO:0004970: ionotropic glutamate receptor activity	8.37E-03
64	GO:0004867: serine-type endopeptidase inhibitor activity	8.37E-03
65	GO:0005217: intracellular ligand-gated ion channel activity	8.37E-03
66	GO:0042803: protein homodimerization activity	9.44E-03
67	GO:0004871: signal transducer activity	9.44E-03
68	GO:0051536: iron-sulfur cluster binding	9.71E-03
69	GO:0031418: L-ascorbic acid binding	9.71E-03
70	GO:0015035: protein disulfide oxidoreductase activity	1.07E-02
71	GO:0008810: cellulase activity	1.26E-02
72	GO:0003727: single-stranded RNA binding	1.34E-02
73	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.34E-02
74	GO:0046872: metal ion binding	1.35E-02
75	GO:0047134: protein-disulfide reductase activity	1.42E-02
76	GO:0030170: pyridoxal phosphate binding	1.44E-02
77	GO:0016757: transferase activity, transferring glycosyl groups	1.45E-02
78	GO:0004791: thioredoxin-disulfide reductase activity	1.66E-02
79	GO:0016853: isomerase activity	1.66E-02
80	GO:0010181: FMN binding	1.66E-02
81	GO:0005355: glucose transmembrane transporter activity	1.66E-02
82	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.01E-02
83	GO:0008194: UDP-glycosyltransferase activity	2.01E-02
84	GO:0016791: phosphatase activity	2.10E-02
85	GO:0008483: transaminase activity	2.19E-02
86	GO:0004806: triglyceride lipase activity	2.67E-02
87	GO:0030247: polysaccharide binding	2.67E-02
88	GO:0005096: GTPase activator activity	2.98E-02
89	GO:0015238: drug transmembrane transporter activity	2.98E-02
90	GO:0020037: heme binding	3.39E-02
91	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.40E-02
92	GO:0030246: carbohydrate binding	3.47E-02
93	GO:0003993: acid phosphatase activity	3.51E-02
94	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.63E-02
95	GO:0019825: oxygen binding	3.72E-02
96	GO:0050661: NADP binding	3.74E-02
97	GO:0051539: 4 iron, 4 sulfur cluster binding	3.74E-02
98	GO:0005516: calmodulin binding	3.98E-02
99	GO:0005525: GTP binding	4.44E-02
100	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.44E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	5.40E-05
2	GO:0005794: Golgi apparatus	7.51E-05
3	GO:0045252: oxoglutarate dehydrogenase complex	1.86E-04
4	GO:0017119: Golgi transport complex	3.16E-04
5	GO:0005950: anthranilate synthase complex	4.19E-04
6	GO:0016021: integral component of membrane	8.30E-04
7	GO:0030658: transport vesicle membrane	9.77E-04
8	GO:0005788: endoplasmic reticulum lumen	2.69E-03
9	GO:0009986: cell surface	2.87E-03
10	GO:0005802: trans-Golgi network	3.23E-03
11	GO:0005779: integral component of peroxisomal membrane	3.80E-03
12	GO:0005768: endosome	4.05E-03
13	GO:0005789: endoplasmic reticulum membrane	1.02E-02
14	GO:0070469: respiratory chain	1.04E-02
15	GO:0005743: mitochondrial inner membrane	1.06E-02
16	GO:0019898: extrinsic component of membrane	1.75E-02
17	GO:0031965: nuclear membrane	1.75E-02
18	GO:0005618: cell wall	1.94E-02
19	GO:0071944: cell periphery	2.01E-02
20	GO:0016020: membrane	2.19E-02
21	GO:0046658: anchored component of plasma membrane	2.38E-02
22	GO:0009505: plant-type cell wall	2.42E-02