co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G27680

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2000505: regulation of energy homeostasis	0.00E+00
2	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
3	GO:0032544: plastid translation	6.13E-06
4	GO:0010275: NAD(P)H dehydrogenase complex assembly	5.37E-05
5	GO:0006986: response to unfolded protein	1.42E-04
6	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	1.42E-04
7	GO:0051085: chaperone mediated protein folding requiring cofactor	1.42E-04
8	GO:0010027: thylakoid membrane organization	1.49E-04
9	GO:0019464: glycine decarboxylation via glycine cleavage system	1.95E-04
10	GO:0000304: response to singlet oxygen	2.51E-04
11	GO:0016120: carotene biosynthetic process	2.51E-04
12	GO:0010190: cytochrome b6f complex assembly	3.11E-04
13	GO:0009735: response to cytokinin	5.56E-04
14	GO:0071482: cellular response to light stimulus	5.74E-04
15	GO:0018119: peptidyl-cysteine S-nitrosylation	8.71E-04
16	GO:0010207: photosystem II assembly	1.11E-03
17	GO:0031408: oxylipin biosynthetic process	1.56E-03
18	GO:0009561: megagametogenesis	1.86E-03
19	GO:0000413: protein peptidyl-prolyl isomerization	2.07E-03
20	GO:0048544: recognition of pollen	2.28E-03
21	GO:0015995: chlorophyll biosynthetic process	3.58E-03
22	GO:0009813: flavonoid biosynthetic process	3.97E-03
23	GO:0009853: photorespiration	4.51E-03
24	GO:0030001: metal ion transport	4.93E-03
25	GO:0006631: fatty acid metabolic process	5.07E-03
26	GO:0006457: protein folding	6.48E-03
27	GO:0006412: translation	1.20E-02
28	GO:0015979: photosynthesis	2.16E-02
29	GO:0045454: cell redox homeostasis	2.23E-02
30	GO:0055085: transmembrane transport	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity	0.00E+00
2	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.32E-05
3	GO:0031072: heat shock protein binding	2.01E-05
4	GO:0051082: unfolded protein binding	2.96E-05
5	GO:0005528: FK506 binding	3.49E-05
6	GO:0019843: rRNA binding	4.22E-05
7	GO:0005504: fatty acid binding	9.50E-05
8	GO:0004375: glycine dehydrogenase (decarboxylating) activity	1.42E-04
9	GO:0045430: chalcone isomerase activity	1.95E-04
10	GO:0004017: adenylate kinase activity	3.73E-04
11	GO:0051920: peroxiredoxin activity	3.73E-04
12	GO:0016209: antioxidant activity	5.05E-04
13	GO:0051087: chaperone binding	1.47E-03
14	GO:0043424: protein histidine kinase binding	1.47E-03
15	GO:0009055: electron carrier activity	3.05E-03
16	GO:0004721: phosphoprotein phosphatase activity	3.58E-03
17	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.46E-02
18	GO:0004601: peroxidase activity	1.68E-02
19	GO:0003735: structural constituent of ribosome	2.03E-02
20	GO:0046872: metal ion binding	4.65E-02
21	GO:0030246: carbohydrate binding	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	7.48E-20
2	GO:0009579: thylakoid	3.61E-14
3	GO:0009570: chloroplast stroma	4.07E-13
4	GO:0009535: chloroplast thylakoid membrane	2.83E-11
5	GO:0009543: chloroplast thylakoid lumen	1.86E-10
6	GO:0009941: chloroplast envelope	1.06E-09
7	GO:0009534: chloroplast thylakoid	4.59E-09
8	GO:0031977: thylakoid lumen	1.17E-07
9	GO:0005960: glycine cleavage complex	1.42E-04
10	GO:0005840: ribosome	2.15E-04
11	GO:0009533: chloroplast stromal thylakoid	4.37E-04
12	GO:0009508: plastid chromosome	1.03E-03
13	GO:0000312: plastid small ribosomal subunit	1.11E-03
14	GO:0043234: protein complex	1.29E-03
15	GO:0009654: photosystem II oxygen evolving complex	1.47E-03
16	GO:0031969: chloroplast membrane	1.94E-03
17	GO:0019898: extrinsic component of membrane	2.39E-03
18	GO:0009295: nucleoid	2.96E-03
19	GO:0010287: plastoglobule	9.48E-03
20	GO:0005759: mitochondrial matrix	1.16E-02
21	GO:0009536: plastid	1.25E-02
22	GO:0046658: anchored component of plasma membrane	1.51E-02
23	GO:0022627: cytosolic small ribosomal subunit	1.51E-02