co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G27040

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006399: tRNA metabolic process	0.00E+00
2	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
3	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
4	GO:0006573: valine metabolic process	0.00E+00
5	GO:0045184: establishment of protein localization	0.00E+00
6	GO:0070125: mitochondrial translational elongation	0.00E+00
7	GO:0070979: protein K11-linked ubiquitination	0.00E+00
8	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
9	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
10	GO:0017038: protein import	0.00E+00
11	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
12	GO:0000372: Group I intron splicing	0.00E+00
13	GO:0010081: regulation of inflorescence meristem growth	0.00E+00
14	GO:0030155: regulation of cell adhesion	0.00E+00
15	GO:1903224: regulation of endodermal cell differentiation	0.00E+00
16	GO:0090706: specification of plant organ position	0.00E+00
17	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
18	GO:1905177: tracheary element differentiation	0.00E+00
19	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
20	GO:0007037: vacuolar phosphate transport	0.00E+00
21	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
22	GO:0007638: mechanosensory behavior	0.00E+00
23	GO:0009658: chloroplast organization	9.75E-08
24	GO:0046620: regulation of organ growth	2.83E-06
25	GO:1900865: chloroplast RNA modification	1.08E-05
26	GO:0045038: protein import into chloroplast thylakoid membrane	1.48E-05
27	GO:1900871: chloroplast mRNA modification	3.00E-05
28	GO:0009451: RNA modification	6.33E-05
29	GO:0009416: response to light stimulus	1.49E-04
30	GO:0016556: mRNA modification	1.94E-04
31	GO:0010239: chloroplast mRNA processing	1.94E-04
32	GO:2001141: regulation of RNA biosynthetic process	1.94E-04
33	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.16E-04
34	GO:0016123: xanthophyll biosynthetic process	4.80E-04
35	GO:0080110: sporopollenin biosynthetic process	4.80E-04
36	GO:0009793: embryo development ending in seed dormancy	6.47E-04
37	GO:0016554: cytidine to uridine editing	6.65E-04
38	GO:0009734: auxin-activated signaling pathway	7.73E-04
39	GO:0009733: response to auxin	7.77E-04
40	GO:0010027: thylakoid membrane organization	8.00E-04
41	GO:0035987: endodermal cell differentiation	8.48E-04
42	GO:0051247: positive regulation of protein metabolic process	8.48E-04
43	GO:1902458: positive regulation of stomatal opening	8.48E-04
44	GO:0015904: tetracycline transport	8.48E-04
45	GO:2000905: negative regulation of starch metabolic process	8.48E-04
46	GO:0005991: trehalose metabolic process	8.48E-04
47	GO:0010450: inflorescence meristem growth	8.48E-04
48	GO:0000305: response to oxygen radical	8.48E-04
49	GO:0006419: alanyl-tRNA aminoacylation	8.48E-04
50	GO:0009090: homoserine biosynthetic process	8.48E-04
51	GO:0070509: calcium ion import	8.48E-04
52	GO:0031426: polycistronic mRNA processing	8.48E-04
53	GO:0042659: regulation of cell fate specification	8.48E-04
54	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	8.48E-04
55	GO:0043266: regulation of potassium ion transport	8.48E-04
56	GO:0010063: positive regulation of trichoblast fate specification	8.48E-04
57	GO:0010480: microsporocyte differentiation	8.48E-04
58	GO:0010080: regulation of floral meristem growth	8.48E-04
59	GO:0006551: leucine metabolic process	8.48E-04
60	GO:0043087: regulation of GTPase activity	8.48E-04
61	GO:2000021: regulation of ion homeostasis	8.48E-04
62	GO:0090558: plant epidermis development	8.48E-04
63	GO:1901259: chloroplast rRNA processing	8.77E-04
64	GO:0009082: branched-chain amino acid biosynthetic process	8.77E-04
65	GO:0009099: valine biosynthetic process	8.77E-04
66	GO:0048437: floral organ development	1.12E-03
67	GO:0070413: trehalose metabolism in response to stress	1.39E-03
68	GO:0071482: cellular response to light stimulus	1.70E-03
69	GO:0009097: isoleucine biosynthetic process	1.70E-03
70	GO:0001682: tRNA 5'-leader removal	1.84E-03
71	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.84E-03
72	GO:0006568: tryptophan metabolic process	1.84E-03
73	GO:2000123: positive regulation of stomatal complex development	1.84E-03
74	GO:0010024: phytochromobilin biosynthetic process	1.84E-03
75	GO:0006420: arginyl-tRNA aminoacylation	1.84E-03
76	GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole	1.84E-03
77	GO:1901959: positive regulation of cutin biosynthetic process	1.84E-03
78	GO:0006432: phenylalanyl-tRNA aminoacylation	1.84E-03
79	GO:0018026: peptidyl-lysine monomethylation	1.84E-03
80	GO:0060359: response to ammonium ion	1.84E-03
81	GO:0048255: mRNA stabilization	1.84E-03
82	GO:1902326: positive regulation of chlorophyll biosynthetic process	1.84E-03
83	GO:1904143: positive regulation of carotenoid biosynthetic process	1.84E-03
84	GO:0080009: mRNA methylation	1.84E-03
85	GO:0009786: regulation of asymmetric cell division	1.84E-03
86	GO:0008033: tRNA processing	1.94E-03
87	GO:0048507: meristem development	2.05E-03
88	GO:0000373: Group II intron splicing	2.05E-03
89	GO:0010182: sugar mediated signaling pathway	2.14E-03
90	GO:0010305: leaf vascular tissue pattern formation	2.14E-03
91	GO:0031425: chloroplast RNA processing	2.43E-03
92	GO:0009098: leucine biosynthetic process	2.43E-03
93	GO:0009926: auxin polar transport	2.56E-03
94	GO:0048829: root cap development	2.84E-03
95	GO:0006788: heme oxidation	3.05E-03
96	GO:0010022: meristem determinacy	3.05E-03
97	GO:0043157: response to cation stress	3.05E-03
98	GO:0072661: protein targeting to plasma membrane	3.05E-03
99	GO:2001295: malonyl-CoA biosynthetic process	3.05E-03
100	GO:0005977: glycogen metabolic process	3.05E-03
101	GO:0045165: cell fate commitment	3.05E-03
102	GO:1904278: positive regulation of wax biosynthetic process	3.05E-03
103	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	3.05E-03
104	GO:0048586: regulation of long-day photoperiodism, flowering	3.05E-03
105	GO:0033591: response to L-ascorbic acid	3.05E-03
106	GO:0031145: anaphase-promoting complex-dependent catabolic process	3.05E-03
107	GO:0048281: inflorescence morphogenesis	3.05E-03
108	GO:0090708: specification of plant organ axis polarity	3.05E-03
109	GO:0010623: programmed cell death involved in cell development	3.05E-03
110	GO:0006696: ergosterol biosynthetic process	3.05E-03
111	GO:0090153: regulation of sphingolipid biosynthetic process	3.05E-03
112	GO:0010583: response to cyclopentenone	3.06E-03
113	GO:0006352: DNA-templated transcription, initiation	3.29E-03
114	GO:0009790: embryo development	3.31E-03
115	GO:0040008: regulation of growth	4.11E-03
116	GO:0010588: cotyledon vascular tissue pattern formation	4.30E-03
117	GO:2000012: regulation of auxin polar transport	4.30E-03
118	GO:0006164: purine nucleotide biosynthetic process	4.44E-03
119	GO:0010148: transpiration	4.44E-03
120	GO:1990019: protein storage vacuole organization	4.44E-03
121	GO:0009067: aspartate family amino acid biosynthetic process	4.44E-03
122	GO:0010371: regulation of gibberellin biosynthetic process	4.44E-03
123	GO:0010071: root meristem specification	4.44E-03
124	GO:0051513: regulation of monopolar cell growth	4.44E-03
125	GO:0007231: osmosensory signaling pathway	4.44E-03
126	GO:0009102: biotin biosynthetic process	4.44E-03
127	GO:0030071: regulation of mitotic metaphase/anaphase transition	4.44E-03
128	GO:0009226: nucleotide-sugar biosynthetic process	4.44E-03
129	GO:0051639: actin filament network formation	4.44E-03
130	GO:0046739: transport of virus in multicellular host	4.44E-03
131	GO:0007275: multicellular organism development	4.44E-03
132	GO:0043572: plastid fission	4.44E-03
133	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	4.44E-03
134	GO:0090308: regulation of methylation-dependent chromatin silencing	4.44E-03
135	GO:0010207: photosystem II assembly	4.86E-03
136	GO:0070588: calcium ion transmembrane transport	5.46E-03
137	GO:0015995: chlorophyll biosynthetic process	5.60E-03
138	GO:0007166: cell surface receptor signaling pathway	5.65E-03
139	GO:0010508: positive regulation of autophagy	6.01E-03
140	GO:0008295: spermidine biosynthetic process	6.01E-03
141	GO:0006749: glutathione metabolic process	6.01E-03
142	GO:0010109: regulation of photosynthesis	6.01E-03
143	GO:0030104: water homeostasis	6.01E-03
144	GO:0033500: carbohydrate homeostasis	6.01E-03
145	GO:0051764: actin crosslink formation	6.01E-03
146	GO:0042274: ribosomal small subunit biogenesis	6.01E-03
147	GO:2000038: regulation of stomatal complex development	6.01E-03
148	GO:0006661: phosphatidylinositol biosynthetic process	6.01E-03
149	GO:0009765: photosynthesis, light harvesting	6.01E-03
150	GO:2000306: positive regulation of photomorphogenesis	6.01E-03
151	GO:0022622: root system development	6.01E-03
152	GO:0010021: amylopectin biosynthetic process	6.01E-03
153	GO:0045723: positive regulation of fatty acid biosynthetic process	6.01E-03
154	GO:0005992: trehalose biosynthetic process	6.78E-03
155	GO:0009944: polarity specification of adaxial/abaxial axis	6.78E-03
156	GO:0051017: actin filament bundle assembly	6.78E-03
157	GO:0051302: regulation of cell division	7.50E-03
158	GO:0009742: brassinosteroid mediated signaling pathway	7.64E-03
159	GO:0016120: carotene biosynthetic process	7.74E-03
160	GO:1902183: regulation of shoot apical meristem development	7.74E-03
161	GO:0010158: abaxial cell fate specification	7.74E-03
162	GO:0032876: negative regulation of DNA endoreduplication	7.74E-03
163	GO:0010375: stomatal complex patterning	7.74E-03
164	GO:0048497: maintenance of floral organ identity	7.74E-03
165	GO:0010431: seed maturation	8.26E-03
166	GO:0030245: cellulose catabolic process	9.06E-03
167	GO:0032973: amino acid export	9.64E-03
168	GO:0010405: arabinogalactan protein metabolic process	9.64E-03
169	GO:0018258: protein O-linked glycosylation via hydroxyproline	9.64E-03
170	GO:0000741: karyogamy	9.64E-03
171	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	9.64E-03
172	GO:0009913: epidermal cell differentiation	9.64E-03
173	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	9.64E-03
174	GO:0009959: negative gravitropism	9.64E-03
175	GO:1902456: regulation of stomatal opening	9.64E-03
176	GO:0042793: transcription from plastid promoter	9.64E-03
177	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	9.64E-03
178	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	9.90E-03
179	GO:0006397: mRNA processing	1.02E-02
180	GO:0005975: carbohydrate metabolic process	1.08E-02
181	GO:0010584: pollen exine formation	1.08E-02
182	GO:2000033: regulation of seed dormancy process	1.17E-02
183	GO:0080086: stamen filament development	1.17E-02
184	GO:0009648: photoperiodism	1.17E-02
185	GO:2000067: regulation of root morphogenesis	1.17E-02
186	GO:0042372: phylloquinone biosynthetic process	1.17E-02
187	GO:0016117: carotenoid biosynthetic process	1.17E-02
188	GO:0017148: negative regulation of translation	1.17E-02
189	GO:0048280: vesicle fusion with Golgi apparatus	1.17E-02
190	GO:0030488: tRNA methylation	1.17E-02
191	GO:0009088: threonine biosynthetic process	1.17E-02
192	GO:0010087: phloem or xylem histogenesis	1.27E-02
193	GO:0010118: stomatal movement	1.27E-02
194	GO:0048366: leaf development	1.28E-02
195	GO:0009958: positive gravitropism	1.37E-02
196	GO:0010103: stomatal complex morphogenesis	1.39E-02
197	GO:0032880: regulation of protein localization	1.39E-02
198	GO:0006955: immune response	1.39E-02
199	GO:0048528: post-embryonic root development	1.39E-02
200	GO:0070370: cellular heat acclimation	1.39E-02
201	GO:0010098: suspensor development	1.39E-02
202	GO:0043090: amino acid import	1.39E-02
203	GO:0010444: guard mother cell differentiation	1.39E-02
204	GO:0006400: tRNA modification	1.39E-02
205	GO:0030307: positive regulation of cell growth	1.39E-02
206	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.39E-02
207	GO:0007018: microtubule-based movement	1.47E-02
208	GO:0009646: response to absence of light	1.47E-02
209	GO:0009664: plant-type cell wall organization	1.61E-02
210	GO:0055075: potassium ion homeostasis	1.62E-02
211	GO:0000105: histidine biosynthetic process	1.62E-02
212	GO:0042255: ribosome assembly	1.62E-02
213	GO:0006353: DNA-templated transcription, termination	1.62E-02
214	GO:0048564: photosystem I assembly	1.62E-02
215	GO:0006605: protein targeting	1.62E-02
216	GO:0032875: regulation of DNA endoreduplication	1.62E-02
217	GO:2000070: regulation of response to water deprivation	1.62E-02
218	GO:0015979: photosynthesis	1.76E-02
219	GO:0032502: developmental process	1.81E-02
220	GO:0010497: plasmodesmata-mediated intercellular transport	1.86E-02
221	GO:0009657: plastid organization	1.86E-02
222	GO:0010093: specification of floral organ identity	1.86E-02
223	GO:0001558: regulation of cell growth	1.86E-02
224	GO:0015996: chlorophyll catabolic process	1.86E-02
225	GO:0032544: plastid translation	1.86E-02
226	GO:0007186: G-protein coupled receptor signaling pathway	1.86E-02
227	GO:0009828: plant-type cell wall loosening	2.06E-02
228	GO:0000902: cell morphogenesis	2.12E-02
229	GO:0080144: amino acid homeostasis	2.12E-02
230	GO:2000024: regulation of leaf development	2.12E-02
231	GO:0006468: protein phosphorylation	2.30E-02
232	GO:2000280: regulation of root development	2.39E-02
233	GO:0009638: phototropism	2.39E-02
234	GO:0006779: porphyrin-containing compound biosynthetic process	2.39E-02
235	GO:0009086: methionine biosynthetic process	2.39E-02
236	GO:0006949: syncytium formation	2.66E-02
237	GO:0031627: telomeric loop formation	2.66E-02
238	GO:0009299: mRNA transcription	2.66E-02
239	GO:0006535: cysteine biosynthetic process from serine	2.66E-02
240	GO:0010162: seed dormancy process	2.66E-02
241	GO:0006896: Golgi to vacuole transport	2.66E-02
242	GO:0006782: protoporphyrinogen IX biosynthetic process	2.66E-02
243	GO:0006415: translational termination	2.95E-02
244	GO:0010216: maintenance of DNA methylation	2.95E-02
245	GO:0009089: lysine biosynthetic process via diaminopimelate	2.95E-02
246	GO:0009073: aromatic amino acid family biosynthetic process	2.95E-02
247	GO:0006816: calcium ion transport	2.95E-02
248	GO:0009773: photosynthetic electron transport in photosystem I	2.95E-02
249	GO:0048229: gametophyte development	2.95E-02
250	GO:0016311: dephosphorylation	3.06E-02
251	GO:0045037: protein import into chloroplast stroma	3.25E-02
252	GO:0010582: floral meristem determinacy	3.25E-02
253	GO:0009832: plant-type cell wall biogenesis	3.38E-02
254	GO:0050826: response to freezing	3.57E-02
255	GO:0009718: anthocyanin-containing compound biosynthetic process	3.57E-02
256	GO:0010075: regulation of meristem growth	3.57E-02
257	GO:0009691: cytokinin biosynthetic process	3.57E-02
258	GO:0009725: response to hormone	3.57E-02
259	GO:0030048: actin filament-based movement	3.57E-02
260	GO:0010628: positive regulation of gene expression	3.57E-02
261	GO:0009933: meristem structural organization	3.89E-02
262	GO:0009887: animal organ morphogenesis	3.89E-02
263	GO:0009934: regulation of meristem structural organization	3.89E-02
264	GO:0006865: amino acid transport	3.89E-02
265	GO:0010020: chloroplast fission	3.89E-02
266	GO:0045087: innate immune response	4.07E-02
267	GO:0009969: xyloglucan biosynthetic process	4.22E-02
268	GO:0010030: positive regulation of seed germination	4.22E-02
269	GO:0006071: glycerol metabolic process	4.55E-02
270	GO:0006833: water transport	4.55E-02
271	GO:0000162: tryptophan biosynthetic process	4.55E-02
272	GO:0071555: cell wall organization	4.62E-02
273	GO:0006839: mitochondrial transport	4.63E-02
274	GO:0007010: cytoskeleton organization	4.90E-02
275	GO:0019344: cysteine biosynthetic process	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
2	GO:0015267: channel activity	0.00E+00
3	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
4	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
5	GO:0046905: phytoene synthase activity	0.00E+00
6	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
7	GO:0005048: signal sequence binding	0.00E+00
8	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
9	GO:0004076: biotin synthase activity	0.00E+00
10	GO:0071633: dihydroceramidase activity	0.00E+00
11	GO:0003937: IMP cyclohydrolase activity	0.00E+00
12	GO:0050613: delta14-sterol reductase activity	0.00E+00
13	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
14	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
15	GO:0004643: phosphoribosylaminoimidazolecarboxamide formyltransferase activity	0.00E+00
16	GO:0003723: RNA binding	5.32E-06
17	GO:0004519: endonuclease activity	2.18E-05
18	GO:0003913: DNA photolyase activity	9.50E-05
19	GO:0001872: (1->3)-beta-D-glucan binding	1.94E-04
20	GO:0001053: plastid sigma factor activity	3.24E-04
21	GO:0016987: sigma factor activity	3.24E-04
22	GO:0019199: transmembrane receptor protein kinase activity	3.24E-04
23	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.78E-04
24	GO:0016597: amino acid binding	7.31E-04
25	GO:0052381: tRNA dimethylallyltransferase activity	8.48E-04
26	GO:0051996: squalene synthase activity	8.48E-04
27	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	8.48E-04
28	GO:0050139: nicotinate-N-glucosyltransferase activity	8.48E-04
29	GO:0051777: ent-kaurenoate oxidase activity	8.48E-04
30	GO:0005227: calcium activated cation channel activity	8.48E-04
31	GO:0004425: indole-3-glycerol-phosphate synthase activity	8.48E-04
32	GO:0003984: acetolactate synthase activity	8.48E-04
33	GO:0008158: hedgehog receptor activity	8.48E-04
34	GO:0005080: protein kinase C binding	8.48E-04
35	GO:0042834: peptidoglycan binding	8.48E-04
36	GO:0080042: ADP-glucose pyrophosphohydrolase activity	8.48E-04
37	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	8.48E-04
38	GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity	8.48E-04
39	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	8.48E-04
40	GO:0004813: alanine-tRNA ligase activity	8.48E-04
41	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.07E-03
42	GO:0004222: metalloendopeptidase activity	1.39E-03
43	GO:0004826: phenylalanine-tRNA ligase activity	1.84E-03
44	GO:0004412: homoserine dehydrogenase activity	1.84E-03
45	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.84E-03
46	GO:0050736: O-malonyltransferase activity	1.84E-03
47	GO:0003852: 2-isopropylmalate synthase activity	1.84E-03
48	GO:0080041: ADP-ribose pyrophosphohydrolase activity	1.84E-03
49	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.84E-03
50	GO:0043425: bHLH transcription factor binding	1.84E-03
51	GO:0004814: arginine-tRNA ligase activity	1.84E-03
52	GO:0004766: spermidine synthase activity	1.84E-03
53	GO:0019156: isoamylase activity	1.84E-03
54	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	1.84E-03
55	GO:0008805: carbon-monoxide oxygenase activity	1.84E-03
56	GO:0050017: L-3-cyanoalanine synthase activity	1.84E-03
57	GO:0017118: lipoyltransferase activity	1.84E-03
58	GO:0008493: tetracycline transporter activity	1.84E-03
59	GO:0004362: glutathione-disulfide reductase activity	1.84E-03
60	GO:0003993: acid phosphatase activity	1.85E-03
61	GO:0004148: dihydrolipoyl dehydrogenase activity	3.05E-03
62	GO:0070402: NADPH binding	3.05E-03
63	GO:0015462: ATPase-coupled protein transmembrane transporter activity	3.05E-03
64	GO:0004180: carboxypeptidase activity	3.05E-03
65	GO:0016805: dipeptidase activity	3.05E-03
66	GO:0000049: tRNA binding	3.78E-03
67	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.94E-03
68	GO:0005524: ATP binding	3.97E-03
69	GO:0031072: heat shock protein binding	4.30E-03
70	GO:0005262: calcium channel activity	4.30E-03
71	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	4.44E-03
72	GO:0016851: magnesium chelatase activity	4.44E-03
73	GO:0052655: L-valine transaminase activity	4.44E-03
74	GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	4.44E-03
75	GO:0004072: aspartate kinase activity	4.44E-03
76	GO:0016149: translation release factor activity, codon specific	4.44E-03
77	GO:0052656: L-isoleucine transaminase activity	4.44E-03
78	GO:0048027: mRNA 5'-UTR binding	4.44E-03
79	GO:0043023: ribosomal large subunit binding	4.44E-03
80	GO:0052654: L-leucine transaminase activity	4.44E-03
81	GO:0008266: poly(U) RNA binding	4.86E-03
82	GO:0016279: protein-lysine N-methyltransferase activity	6.01E-03
83	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	6.01E-03
84	GO:0042277: peptide binding	6.01E-03
85	GO:0004392: heme oxygenase (decyclizing) activity	6.01E-03
86	GO:0004084: branched-chain-amino-acid transaminase activity	6.01E-03
87	GO:0005528: FK506 binding	6.78E-03
88	GO:0016773: phosphotransferase activity, alcohol group as acceptor	7.74E-03
89	GO:0003989: acetyl-CoA carboxylase activity	7.74E-03
90	GO:0004176: ATP-dependent peptidase activity	8.26E-03
91	GO:1990714: hydroxyproline O-galactosyltransferase activity	9.64E-03
92	GO:0004526: ribonuclease P activity	9.64E-03
93	GO:0004556: alpha-amylase activity	9.64E-03
94	GO:0016208: AMP binding	9.64E-03
95	GO:0004462: lactoylglutathione lyase activity	9.64E-03
96	GO:0030570: pectate lyase activity	9.90E-03
97	GO:0008810: cellulase activity	9.90E-03
98	GO:0003727: single-stranded RNA binding	1.08E-02
99	GO:0004124: cysteine synthase activity	1.17E-02
100	GO:0008195: phosphatidate phosphatase activity	1.17E-02
101	GO:0004656: procollagen-proline 4-dioxygenase activity	1.17E-02
102	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.17E-02
103	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	1.39E-02
104	GO:0009881: photoreceptor activity	1.39E-02
105	GO:0050662: coenzyme binding	1.47E-02
106	GO:0019901: protein kinase binding	1.58E-02
107	GO:0008312: 7S RNA binding	1.62E-02
108	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.76E-02
109	GO:0008173: RNA methyltransferase activity	1.86E-02
110	GO:0051015: actin filament binding	1.93E-02
111	GO:0003777: microtubule motor activity	2.00E-02
112	GO:0015171: amino acid transmembrane transporter activity	2.00E-02
113	GO:0016791: phosphatase activity	2.06E-02
114	GO:0003747: translation release factor activity	2.12E-02
115	GO:0008417: fucosyltransferase activity	2.12E-02
116	GO:0008889: glycerophosphodiester phosphodiesterase activity	2.12E-02
117	GO:0008237: metallopeptidase activity	2.19E-02
118	GO:0005200: structural constituent of cytoskeleton	2.19E-02
119	GO:0004743: pyruvate kinase activity	2.39E-02
120	GO:0030955: potassium ion binding	2.39E-02
121	GO:0004805: trehalose-phosphatase activity	2.66E-02
122	GO:0030247: polysaccharide binding	2.90E-02
123	GO:0005089: Rho guanyl-nucleotide exchange factor activity	2.95E-02
124	GO:0003691: double-stranded telomeric DNA binding	2.95E-02
125	GO:0000976: transcription regulatory region sequence-specific DNA binding	3.25E-02
126	GO:0005096: GTPase activator activity	3.38E-02
127	GO:0009982: pseudouridine synthase activity	3.57E-02
128	GO:0019843: rRNA binding	3.64E-02
129	GO:0016491: oxidoreductase activity	3.74E-02
130	GO:0008083: growth factor activity	3.89E-02
131	GO:0003774: motor activity	3.89E-02
132	GO:0016829: lyase activity	4.01E-02
133	GO:0003746: translation elongation factor activity	4.07E-02
134	GO:0003697: single-stranded DNA binding	4.07E-02
135	GO:0008146: sulfotransferase activity	4.22E-02
136	GO:0050661: NADP binding	4.63E-02
137	GO:0030246: carbohydrate binding	4.85E-02
138	GO:0052689: carboxylic ester hydrolase activity	4.86E-02
139	GO:0031418: L-ascorbic acid binding	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0005948: acetolactate synthase complex	0.00E+00
3	GO:0000408: EKC/KEOPS complex	0.00E+00
4	GO:0009507: chloroplast	2.92E-25
5	GO:0009570: chloroplast stroma	6.66E-11
6	GO:0009508: plastid chromosome	1.45E-06
7	GO:0005886: plasma membrane	1.07E-05
8	GO:0080085: signal recognition particle, chloroplast targeting	3.00E-05
9	GO:0009941: chloroplast envelope	7.88E-05
10	GO:0009295: nucleoid	9.13E-05
11	GO:0046658: anchored component of plasma membrane	1.38E-04
12	GO:0031225: anchored component of membrane	6.38E-04
13	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.70E-03
14	GO:0000427: plastid-encoded plastid RNA polymerase complex	1.84E-03
15	GO:0042644: chloroplast nucleoid	2.05E-03
16	GO:0030139: endocytic vesicle	3.05E-03
17	GO:0009317: acetyl-CoA carboxylase complex	3.05E-03
18	GO:0009528: plastid inner membrane	3.05E-03
19	GO:0019897: extrinsic component of plasma membrane	3.05E-03
20	GO:0010007: magnesium chelatase complex	3.05E-03
21	GO:0043231: intracellular membrane-bounded organelle	3.86E-03
22	GO:0010319: stromule	3.90E-03
23	GO:0031969: chloroplast membrane	4.37E-03
24	GO:0015630: microtubule cytoskeleton	4.44E-03
25	GO:0042646: plastid nucleoid	4.44E-03
26	GO:0032585: multivesicular body membrane	4.44E-03
27	GO:0032432: actin filament bundle	4.44E-03
28	GO:0030529: intracellular ribonucleoprotein complex	4.53E-03
29	GO:0030663: COPI-coated vesicle membrane	6.01E-03
30	GO:0009527: plastid outer membrane	6.01E-03
31	GO:0009534: chloroplast thylakoid	6.20E-03
32	GO:0009535: chloroplast thylakoid membrane	6.57E-03
33	GO:0009706: chloroplast inner membrane	6.99E-03
34	GO:0009654: photosystem II oxygen evolving complex	7.50E-03
35	GO:0009532: plastid stroma	8.26E-03
36	GO:0009543: chloroplast thylakoid lumen	9.86E-03
37	GO:0015629: actin cytoskeleton	9.90E-03
38	GO:0005871: kinesin complex	1.17E-02
39	GO:0005874: microtubule	1.32E-02
40	GO:0009986: cell surface	1.39E-02
41	GO:0019898: extrinsic component of membrane	1.58E-02
42	GO:0048226: Casparian strip	1.62E-02
43	GO:0012507: ER to Golgi transport vesicle membrane	1.62E-02
44	GO:0009501: amyloplast	1.62E-02
45	GO:0000783: nuclear telomere cap complex	1.86E-02
46	GO:0005680: anaphase-promoting complex	2.12E-02
47	GO:0005720: nuclear heterochromatin	2.12E-02
48	GO:0016604: nuclear body	2.39E-02
49	GO:0000418: DNA-directed RNA polymerase IV complex	2.66E-02
50	GO:0016459: myosin complex	2.66E-02
51	GO:0030125: clathrin vesicle coat	2.66E-02
52	GO:0005884: actin filament	2.95E-02
53	GO:0009536: plastid	3.21E-02
54	GO:0009707: chloroplast outer membrane	3.22E-02
55	GO:0005578: proteinaceous extracellular matrix	3.57E-02
56	GO:0009574: preprophase band	3.57E-02
57	GO:0030095: chloroplast photosystem II	3.89E-02
58	GO:0030176: integral component of endoplasmic reticulum membrane	4.22E-02
59	GO:0005759: mitochondrial matrix	4.81E-02