co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G26900

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015717: triose phosphate transport	0.00E+00
2	GO:0015742: alpha-ketoglutarate transport	0.00E+00
3	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
4	GO:0006642: triglyceride mobilization	0.00E+00
5	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
6	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
7	GO:0002184: cytoplasmic translational termination	0.00E+00
8	GO:0015995: chlorophyll biosynthetic process	3.90E-08
9	GO:0006783: heme biosynthetic process	6.88E-05
10	GO:0010206: photosystem II repair	6.88E-05
11	GO:0005980: glycogen catabolic process	8.43E-05
12	GO:0007093: mitotic cell cycle checkpoint	8.43E-05
13	GO:0043007: maintenance of rDNA	8.43E-05
14	GO:0010028: xanthophyll cycle	8.43E-05
15	GO:0034337: RNA folding	8.43E-05
16	GO:0046166: glyceraldehyde-3-phosphate biosynthetic process	8.43E-05
17	GO:0005991: trehalose metabolic process	8.43E-05
18	GO:0000023: maltose metabolic process	8.43E-05
19	GO:0006782: protoporphyrinogen IX biosynthetic process	1.00E-04
20	GO:0005983: starch catabolic process	1.37E-04
21	GO:0009658: chloroplast organization	1.80E-04
22	GO:0007154: cell communication	2.00E-04
23	GO:0090342: regulation of cell aging	2.00E-04
24	GO:0051304: chromosome separation	2.00E-04
25	GO:0016122: xanthophyll metabolic process	2.00E-04
26	GO:0009629: response to gravity	2.00E-04
27	GO:0006418: tRNA aminoacylation for protein translation	2.83E-04
28	GO:0015979: photosynthesis	3.19E-04
29	GO:0035436: triose phosphate transmembrane transport	3.35E-04
30	GO:0009405: pathogenesis	3.35E-04
31	GO:0032504: multicellular organism reproduction	3.35E-04
32	GO:0019563: glycerol catabolic process	3.35E-04
33	GO:0010731: protein glutathionylation	4.84E-04
34	GO:0015729: oxaloacetate transport	4.84E-04
35	GO:0010601: positive regulation of auxin biosynthetic process	4.84E-04
36	GO:0046739: transport of virus in multicellular host	4.84E-04
37	GO:0019252: starch biosynthetic process	5.85E-04
38	GO:0015994: chlorophyll metabolic process	6.44E-04
39	GO:0015713: phosphoglycerate transport	6.44E-04
40	GO:0019676: ammonia assimilation cycle	6.44E-04
41	GO:0009790: embryo development	6.44E-04
42	GO:0015743: malate transport	6.44E-04
43	GO:0071423: malate transmembrane transport	8.14E-04
44	GO:0009735: response to cytokinin	9.92E-04
45	GO:0009643: photosynthetic acclimation	9.94E-04
46	GO:0010304: PSII associated light-harvesting complex II catabolic process	9.94E-04
47	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	9.94E-04
48	GO:0000470: maturation of LSU-rRNA	9.94E-04
49	GO:1901259: chloroplast rRNA processing	1.18E-03
50	GO:0010310: regulation of hydrogen peroxide metabolic process	1.18E-03
51	GO:0048437: floral organ development	1.39E-03
52	GO:0005978: glycogen biosynthetic process	1.60E-03
53	GO:0006353: DNA-templated transcription, termination	1.60E-03
54	GO:0070413: trehalose metabolism in response to stress	1.60E-03
55	GO:0048564: photosystem I assembly	1.60E-03
56	GO:0032544: plastid translation	1.83E-03
57	GO:0010497: plasmodesmata-mediated intercellular transport	1.83E-03
58	GO:0071577: zinc II ion transmembrane transport	2.30E-03
59	GO:0010205: photoinhibition	2.30E-03
60	GO:0045036: protein targeting to chloroplast	2.56E-03
61	GO:0010629: negative regulation of gene expression	2.56E-03
62	GO:0009773: photosynthetic electron transport in photosystem I	2.82E-03
63	GO:0006820: anion transport	3.09E-03
64	GO:0006094: gluconeogenesis	3.37E-03
65	GO:0009624: response to nematode	3.50E-03
66	GO:0009266: response to temperature stimulus	3.66E-03
67	GO:0019253: reductive pentose-phosphate cycle	3.66E-03
68	GO:0051017: actin filament bundle assembly	4.57E-03
69	GO:0005992: trehalose biosynthetic process	4.57E-03
70	GO:0009768: photosynthesis, light harvesting in photosystem I	4.89E-03
71	GO:0006508: proteolysis	5.05E-03
72	GO:0016114: terpenoid biosynthetic process	5.22E-03
73	GO:0061077: chaperone-mediated protein folding	5.22E-03
74	GO:0016226: iron-sulfur cluster assembly	5.55E-03
75	GO:0005975: carbohydrate metabolic process	6.20E-03
76	GO:0080022: primary root development	6.97E-03
77	GO:0010182: sugar mediated signaling pathway	7.34E-03
78	GO:0006814: sodium ion transport	7.72E-03
79	GO:0009556: microsporogenesis	8.10E-03
80	GO:0030163: protein catabolic process	9.30E-03
81	GO:1901657: glycosyl compound metabolic process	9.30E-03
82	GO:0010027: thylakoid membrane organization	1.10E-02
83	GO:0009607: response to biotic stimulus	1.14E-02
84	GO:0006906: vesicle fusion	1.19E-02
85	GO:0009817: defense response to fungus, incompatible interaction	1.33E-02
86	GO:0048481: plant ovule development	1.33E-02
87	GO:0009832: plant-type cell wall biogenesis	1.37E-02
88	GO:0006499: N-terminal protein myristoylation	1.42E-02
89	GO:0006631: fatty acid metabolic process	1.77E-02
90	GO:0006887: exocytosis	1.77E-02
91	GO:0006897: endocytosis	1.77E-02
92	GO:0015031: protein transport	1.99E-02
93	GO:0006812: cation transport	2.21E-02
94	GO:0006364: rRNA processing	2.32E-02
95	GO:0006096: glycolytic process	2.62E-02
96	GO:0009553: embryo sac development	2.92E-02
97	GO:0009416: response to light stimulus	3.04E-02
98	GO:0006412: translation	3.90E-02
99	GO:0006633: fatty acid biosynthetic process	4.12E-02

Rank	GO Term	Adjusted P value
1	GO:0005363: maltose transmembrane transporter activity	0.00E+00
2	GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity	0.00E+00
3	GO:0010303: limit dextrinase activity	0.00E+00
4	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
5	GO:0046408: chlorophyll synthetase activity	0.00E+00
6	GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity	0.00E+00
7	GO:0051060: pullulanase activity	0.00E+00
8	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
9	GO:0004853: uroporphyrinogen decarboxylase activity	0.00E+00
10	GO:0015139: alpha-ketoglutarate transmembrane transporter activity	0.00E+00
11	GO:0004807: triose-phosphate isomerase activity	8.43E-05
12	GO:0008184: glycogen phosphorylase activity	8.43E-05
13	GO:0004645: phosphorylase activity	8.43E-05
14	GO:0015367: oxoglutarate:malate antiporter activity	2.00E-04
15	GO:0008967: phosphoglycolate phosphatase activity	2.00E-04
16	GO:0016630: protochlorophyllide reductase activity	2.00E-04
17	GO:0045174: glutathione dehydrogenase (ascorbate) activity	3.35E-04
18	GO:0002161: aminoacyl-tRNA editing activity	3.35E-04
19	GO:0071917: triose-phosphate transmembrane transporter activity	3.35E-04
20	GO:0090729: toxin activity	3.35E-04
21	GO:0004812: aminoacyl-tRNA ligase activity	4.38E-04
22	GO:0043023: ribosomal large subunit binding	4.84E-04
23	GO:0016851: magnesium chelatase activity	4.84E-04
24	GO:0015131: oxaloacetate transmembrane transporter activity	4.84E-04
25	GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	4.84E-04
26	GO:0019843: rRNA binding	5.30E-04
27	GO:0015120: phosphoglycerate transmembrane transporter activity	6.44E-04
28	GO:0008878: glucose-1-phosphate adenylyltransferase activity	6.44E-04
29	GO:0008237: metallopeptidase activity	7.98E-04
30	GO:0003959: NADPH dehydrogenase activity	8.14E-04
31	GO:0004629: phospholipase C activity	9.94E-04
32	GO:0004556: alpha-amylase activity	9.94E-04
33	GO:0004435: phosphatidylinositol phospholipase C activity	1.18E-03
34	GO:0004222: metalloendopeptidase activity	1.26E-03
35	GO:0015140: malate transmembrane transporter activity	1.39E-03
36	GO:0005525: GTP binding	2.40E-03
37	GO:0047372: acylglycerol lipase activity	2.82E-03
38	GO:0000049: tRNA binding	3.09E-03
39	GO:0031409: pigment binding	4.26E-03
40	GO:0005528: FK506 binding	4.57E-03
41	GO:0051536: iron-sulfur cluster binding	4.57E-03
42	GO:0005385: zinc ion transmembrane transporter activity	4.57E-03
43	GO:0004252: serine-type endopeptidase activity	4.84E-03
44	GO:0008324: cation transmembrane transporter activity	4.89E-03
45	GO:0004176: ATP-dependent peptidase activity	5.22E-03
46	GO:0051015: actin filament binding	9.30E-03
47	GO:0016791: phosphatase activity	9.72E-03
48	GO:0016168: chlorophyll binding	1.14E-02
49	GO:0102483: scopolin beta-glucosidase activity	1.23E-02
50	GO:0008236: serine-type peptidase activity	1.28E-02
51	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.33E-02
52	GO:0003993: acid phosphatase activity	1.62E-02
53	GO:0000149: SNARE binding	1.67E-02
54	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.67E-02
55	GO:0008422: beta-glucosidase activity	1.67E-02
56	GO:0003924: GTPase activity	1.71E-02
57	GO:0004364: glutathione transferase activity	1.83E-02
58	GO:0005484: SNAP receptor activity	1.88E-02
59	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.10E-02
60	GO:0016887: ATPase activity	2.65E-02
61	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.68E-02
62	GO:0003735: structural constituent of ribosome	3.48E-02
63	GO:0030170: pyridoxal phosphate binding	3.77E-02
64	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.00E-02
65	GO:0015297: antiporter activity	4.26E-02
66	GO:0005524: ATP binding	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0010170: glucose-1-phosphate adenylyltransferase complex	0.00E+00
2	GO:0009507: chloroplast	8.37E-27
3	GO:0009570: chloroplast stroma	7.03E-18
4	GO:0009534: chloroplast thylakoid	2.51E-11
5	GO:0009941: chloroplast envelope	8.05E-11
6	GO:0009535: chloroplast thylakoid membrane	2.61E-08
7	GO:0009579: thylakoid	3.13E-06
8	GO:0009706: chloroplast inner membrane	2.95E-05
9	GO:0031969: chloroplast membrane	2.57E-04
10	GO:0010007: magnesium chelatase complex	3.35E-04
11	GO:0009543: chloroplast thylakoid lumen	5.30E-04
12	GO:0009840: chloroplastic endopeptidase Clp complex	1.18E-03
13	GO:0031977: thylakoid lumen	1.70E-03
14	GO:0031901: early endosome membrane	2.06E-03
15	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.06E-03
16	GO:0032040: small-subunit processome	3.09E-03
17	GO:0030095: chloroplast photosystem II	3.66E-03
18	GO:0030076: light-harvesting complex	3.95E-03
19	GO:0015935: small ribosomal subunit	5.22E-03
20	GO:0009532: plastid stroma	5.22E-03
21	GO:0015629: actin cytoskeleton	5.89E-03
22	GO:0009707: chloroplast outer membrane	1.33E-02
23	GO:0005840: ribosome	1.56E-02
24	GO:0031201: SNARE complex	1.77E-02
25	GO:0043231: intracellular membrane-bounded organelle	1.89E-02
26	GO:0009536: plastid	1.91E-02
27	GO:0005856: cytoskeleton	2.04E-02
28	GO:0016020: membrane	3.33E-02
29	GO:0010287: plastoglobule	3.37E-02
30	GO:0005623: cell	3.57E-02