co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G26710

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
2	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
3	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
4	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
5	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
6	GO:0006573: valine metabolic process	0.00E+00
7	GO:0090697: post-embryonic plant organ morphogenesis	0.00E+00
8	GO:0045184: establishment of protein localization	0.00E+00
9	GO:1903224: regulation of endodermal cell differentiation	0.00E+00
10	GO:0080127: fruit septum development	0.00E+00
11	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
12	GO:0070979: protein K11-linked ubiquitination	0.00E+00
13	GO:0061157: mRNA destabilization	0.00E+00
14	GO:2000469: negative regulation of peroxidase activity	0.00E+00
15	GO:0046620: regulation of organ growth	2.47E-05
16	GO:0009098: leucine biosynthetic process	6.26E-05
17	GO:1900865: chloroplast RNA modification	6.26E-05
18	GO:0016554: cytidine to uridine editing	2.78E-04
19	GO:0009082: branched-chain amino acid biosynthetic process	3.72E-04
20	GO:0009099: valine biosynthetic process	3.72E-04
21	GO:0030488: tRNA methylation	3.72E-04
22	GO:0009733: response to auxin	3.98E-04
23	GO:0000025: maltose catabolic process	4.76E-04
24	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	4.76E-04
25	GO:0090558: plant epidermis development	4.76E-04
26	GO:0009090: homoserine biosynthetic process	4.76E-04
27	GO:0046900: tetrahydrofolylpolyglutamate metabolic process	4.76E-04
28	GO:0043266: regulation of potassium ion transport	4.76E-04
29	GO:0010063: positive regulation of trichoblast fate specification	4.76E-04
30	GO:0006551: leucine metabolic process	4.76E-04
31	GO:2000021: regulation of ion homeostasis	4.76E-04
32	GO:0035987: endodermal cell differentiation	4.76E-04
33	GO:0015904: tetracycline transport	4.76E-04
34	GO:0034757: negative regulation of iron ion transport	4.76E-04
35	GO:0042659: regulation of cell fate specification	4.76E-04
36	GO:0010087: phloem or xylem histogenesis	6.44E-04
37	GO:0009097: isoleucine biosynthetic process	7.27E-04
38	GO:0000373: Group II intron splicing	8.70E-04
39	GO:0009734: auxin-activated signaling pathway	9.39E-04
40	GO:0009451: RNA modification	9.75E-04
41	GO:1900871: chloroplast mRNA modification	1.02E-03
42	GO:0010271: regulation of chlorophyll catabolic process	1.02E-03
43	GO:0030187: melatonin biosynthetic process	1.02E-03
44	GO:0006432: phenylalanyl-tRNA aminoacylation	1.02E-03
45	GO:1900033: negative regulation of trichome patterning	1.02E-03
46	GO:0080009: mRNA methylation	1.02E-03
47	GO:0009786: regulation of asymmetric cell division	1.02E-03
48	GO:0031648: protein destabilization	1.02E-03
49	GO:0001682: tRNA 5'-leader removal	1.02E-03
50	GO:0006568: tryptophan metabolic process	1.02E-03
51	GO:0010582: floral meristem determinacy	1.57E-03
52	GO:0080117: secondary growth	1.67E-03
53	GO:0009405: pathogenesis	1.67E-03
54	GO:0031145: anaphase-promoting complex-dependent catabolic process	1.67E-03
55	GO:0071398: cellular response to fatty acid	1.67E-03
56	GO:0030029: actin filament-based process	1.67E-03
57	GO:0033591: response to L-ascorbic acid	1.67E-03
58	GO:0090708: specification of plant organ axis polarity	1.67E-03
59	GO:0006006: glucose metabolic process	1.79E-03
60	GO:0010306: rhamnogalacturonan II biosynthetic process	2.42E-03
61	GO:1990019: protein storage vacuole organization	2.42E-03
62	GO:0046739: transport of virus in multicellular host	2.42E-03
63	GO:0009067: aspartate family amino acid biosynthetic process	2.42E-03
64	GO:0010371: regulation of gibberellin biosynthetic process	2.42E-03
65	GO:0010071: root meristem specification	2.42E-03
66	GO:0051513: regulation of monopolar cell growth	2.42E-03
67	GO:0009102: biotin biosynthetic process	2.42E-03
68	GO:0030071: regulation of mitotic metaphase/anaphase transition	2.42E-03
69	GO:0010239: chloroplast mRNA processing	2.42E-03
70	GO:0005992: trehalose biosynthetic process	2.80E-03
71	GO:0006221: pyrimidine nucleotide biosynthetic process	3.26E-03
72	GO:0030104: water homeostasis	3.26E-03
73	GO:0008295: spermidine biosynthetic process	3.26E-03
74	GO:0009755: hormone-mediated signaling pathway	3.26E-03
75	GO:0048629: trichome patterning	3.26E-03
76	GO:0042274: ribosomal small subunit biogenesis	3.26E-03
77	GO:0010431: seed maturation	3.40E-03
78	GO:0009926: auxin polar transport	3.87E-03
79	GO:0040008: regulation of growth	3.88E-03
80	GO:0071215: cellular response to abscisic acid stimulus	4.06E-03
81	GO:0080110: sporopollenin biosynthetic process	4.18E-03
82	GO:0009107: lipoate biosynthetic process	4.18E-03
83	GO:0016123: xanthophyll biosynthetic process	4.18E-03
84	GO:0010438: cellular response to sulfur starvation	4.18E-03
85	GO:0010158: abaxial cell fate specification	4.18E-03
86	GO:0032876: negative regulation of DNA endoreduplication	4.18E-03
87	GO:1902456: regulation of stomatal opening	5.18E-03
88	GO:0048831: regulation of shoot system development	5.18E-03
89	GO:0010190: cytochrome b6f complex assembly	5.18E-03
90	GO:0003006: developmental process involved in reproduction	5.18E-03
91	GO:0018258: protein O-linked glycosylation via hydroxyproline	5.18E-03
92	GO:0008033: tRNA processing	5.18E-03
93	GO:0010405: arabinogalactan protein metabolic process	5.18E-03
94	GO:0009959: negative gravitropism	5.18E-03
95	GO:0010305: leaf vascular tissue pattern formation	5.59E-03
96	GO:0031930: mitochondria-nucleus signaling pathway	6.24E-03
97	GO:0048509: regulation of meristem development	6.24E-03
98	GO:0009088: threonine biosynthetic process	6.24E-03
99	GO:0009648: photoperiodism	6.24E-03
100	GO:2000067: regulation of root morphogenesis	6.24E-03
101	GO:0009909: regulation of flower development	6.45E-03
102	GO:0000302: response to reactive oxygen species	6.91E-03
103	GO:0010050: vegetative phase change	7.39E-03
104	GO:0048437: floral organ development	7.39E-03
105	GO:0010583: response to cyclopentenone	7.39E-03
106	GO:0010098: suspensor development	7.39E-03
107	GO:0016032: viral process	7.39E-03
108	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	7.39E-03
109	GO:0030307: positive regulation of cell growth	7.39E-03
110	GO:0010161: red light signaling pathway	7.39E-03
111	GO:0006955: immune response	7.39E-03
112	GO:0009658: chloroplast organization	8.11E-03
113	GO:0006464: cellular protein modification process	8.39E-03
114	GO:0009819: drought recovery	8.60E-03
115	GO:0006402: mRNA catabolic process	8.60E-03
116	GO:0010439: regulation of glucosinolate biosynthetic process	8.60E-03
117	GO:0009850: auxin metabolic process	8.60E-03
118	GO:0070413: trehalose metabolism in response to stress	8.60E-03
119	GO:0032875: regulation of DNA endoreduplication	8.60E-03
120	GO:2000070: regulation of response to water deprivation	8.60E-03
121	GO:0055075: potassium ion homeostasis	8.60E-03
122	GO:0000105: histidine biosynthetic process	8.60E-03
123	GO:0010100: negative regulation of photomorphogenesis	9.88E-03
124	GO:0032544: plastid translation	9.88E-03
125	GO:0010099: regulation of photomorphogenesis	9.88E-03
126	GO:0071482: cellular response to light stimulus	9.88E-03
127	GO:0010029: regulation of seed germination	1.06E-02
128	GO:0051865: protein autoubiquitination	1.12E-02
129	GO:0048507: meristem development	1.12E-02
130	GO:0006783: heme biosynthetic process	1.12E-02
131	GO:0000902: cell morphogenesis	1.12E-02
132	GO:0009051: pentose-phosphate shunt, oxidative branch	1.12E-02
133	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.18E-02
134	GO:0010018: far-red light signaling pathway	1.26E-02
135	GO:0009086: methionine biosynthetic process	1.26E-02
136	GO:2000280: regulation of root development	1.26E-02
137	GO:0016571: histone methylation	1.26E-02
138	GO:0031425: chloroplast RNA processing	1.26E-02
139	GO:0016573: histone acetylation	1.26E-02
140	GO:0000160: phosphorelay signal transduction system	1.38E-02
141	GO:0009299: mRNA transcription	1.41E-02
142	GO:0048829: root cap development	1.41E-02
143	GO:0009790: embryo development	1.44E-02
144	GO:0045892: negative regulation of transcription, DNA-templated	1.51E-02
145	GO:0048527: lateral root development	1.52E-02
146	GO:0009682: induced systemic resistance	1.56E-02
147	GO:0009089: lysine biosynthetic process via diaminopimelate	1.56E-02
148	GO:0043085: positive regulation of catalytic activity	1.56E-02
149	GO:0009416: response to light stimulus	1.59E-02
150	GO:0005983: starch catabolic process	1.72E-02
151	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.72E-02
152	GO:0034599: cellular response to oxidative stress	1.75E-02
153	GO:0010588: cotyledon vascular tissue pattern formation	1.88E-02
154	GO:0010102: lateral root morphogenesis	1.88E-02
155	GO:0009691: cytokinin biosynthetic process	1.88E-02
156	GO:2000028: regulation of photoperiodism, flowering	1.88E-02
157	GO:0009725: response to hormone	1.88E-02
158	GO:0006541: glutamine metabolic process	2.05E-02
159	GO:0009266: response to temperature stimulus	2.05E-02
160	GO:0048467: gynoecium development	2.05E-02
161	GO:0007166: cell surface receptor signaling pathway	2.12E-02
162	GO:0008283: cell proliferation	2.16E-02
163	GO:0090351: seedling development	2.23E-02
164	GO:0042753: positive regulation of circadian rhythm	2.41E-02
165	GO:0006833: water transport	2.41E-02
166	GO:0019762: glucosinolate catabolic process	2.41E-02
167	GO:0000162: tryptophan biosynthetic process	2.41E-02
168	GO:0009636: response to toxic substance	2.42E-02
169	GO:0030150: protein import into mitochondrial matrix	2.59E-02
170	GO:0080147: root hair cell development	2.59E-02
171	GO:0006338: chromatin remodeling	2.59E-02
172	GO:0010187: negative regulation of seed germination	2.59E-02
173	GO:0051302: regulation of cell division	2.78E-02
174	GO:0009736: cytokinin-activated signaling pathway	2.91E-02
175	GO:0016998: cell wall macromolecule catabolic process	2.97E-02
176	GO:2000022: regulation of jasmonic acid mediated signaling pathway	3.17E-02
177	GO:0009693: ethylene biosynthetic process	3.37E-02
178	GO:0009686: gibberellin biosynthetic process	3.37E-02
179	GO:0010082: regulation of root meristem growth	3.37E-02
180	GO:0009625: response to insect	3.37E-02
181	GO:0048316: seed development	3.55E-02
182	GO:0048367: shoot system development	3.55E-02
183	GO:0042127: regulation of cell proliferation	3.58E-02
184	GO:0010584: pollen exine formation	3.58E-02
185	GO:0048366: leaf development	3.79E-02
186	GO:0070417: cellular response to cold	3.79E-02
187	GO:0016117: carotenoid biosynthetic process	3.79E-02
188	GO:0009740: gibberellic acid mediated signaling pathway	3.89E-02
189	GO:0080022: primary root development	4.01E-02
190	GO:0010118: stomatal movement	4.01E-02
191	GO:0009958: positive gravitropism	4.23E-02
192	GO:0006662: glycerol ether metabolic process	4.23E-02
193	GO:0010182: sugar mediated signaling pathway	4.23E-02
194	GO:0048868: pollen tube development	4.23E-02
195	GO:0048544: recognition of pollen	4.45E-02
196	GO:0009646: response to absence of light	4.45E-02
197	GO:0071554: cell wall organization or biogenesis	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
2	GO:0071633: dihydroceramidase activity	0.00E+00
3	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
4	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
5	GO:0004076: biotin synthase activity	0.00E+00
6	GO:0004059: aralkylamine N-acetyltransferase activity	0.00E+00
7	GO:0017118: lipoyltransferase activity	9.99E-06
8	GO:0001872: (1->3)-beta-D-glucan binding	7.31E-05
9	GO:0003723: RNA binding	1.69E-04
10	GO:0042834: peptidoglycan binding	4.76E-04
11	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	4.76E-04
12	GO:0080042: ADP-glucose pyrophosphohydrolase activity	4.76E-04
13	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	4.76E-04
14	GO:0004134: 4-alpha-glucanotransferase activity	4.76E-04
15	GO:0052381: tRNA dimethylallyltransferase activity	4.76E-04
16	GO:0003984: acetolactate synthase activity	4.76E-04
17	GO:0010313: phytochrome binding	4.76E-04
18	GO:0008242: omega peptidase activity	4.76E-04
19	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	4.76E-04
20	GO:0050139: nicotinate-N-glucosyltransferase activity	4.76E-04
21	GO:0005227: calcium activated cation channel activity	4.76E-04
22	GO:0004425: indole-3-glycerol-phosphate synthase activity	4.76E-04
23	GO:0008805: carbon-monoxide oxygenase activity	1.02E-03
24	GO:0008493: tetracycline transporter activity	1.02E-03
25	GO:0004826: phenylalanine-tRNA ligase activity	1.02E-03
26	GO:0004412: homoserine dehydrogenase activity	1.02E-03
27	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.02E-03
28	GO:0050736: O-malonyltransferase activity	1.02E-03
29	GO:0009884: cytokinin receptor activity	1.02E-03
30	GO:0034722: gamma-glutamyl-peptidase activity	1.02E-03
31	GO:0003862: 3-isopropylmalate dehydrogenase activity	1.02E-03
32	GO:0003852: 2-isopropylmalate synthase activity	1.02E-03
33	GO:0080041: ADP-ribose pyrophosphohydrolase activity	1.02E-03
34	GO:0043425: bHLH transcription factor binding	1.02E-03
35	GO:0016415: octanoyltransferase activity	1.02E-03
36	GO:0004766: spermidine synthase activity	1.02E-03
37	GO:0004805: trehalose-phosphatase activity	1.19E-03
38	GO:0004148: dihydrolipoyl dehydrogenase activity	1.67E-03
39	GO:0005034: osmosensor activity	1.67E-03
40	GO:0009982: pseudouridine synthase activity	1.79E-03
41	GO:0004519: endonuclease activity	1.92E-03
42	GO:0009041: uridylate kinase activity	2.42E-03
43	GO:0052656: L-isoleucine transaminase activity	2.42E-03
44	GO:0052654: L-leucine transaminase activity	2.42E-03
45	GO:0052655: L-valine transaminase activity	2.42E-03
46	GO:0004072: aspartate kinase activity	2.42E-03
47	GO:0005528: FK506 binding	2.80E-03
48	GO:0004084: branched-chain-amino-acid transaminase activity	3.26E-03
49	GO:0019199: transmembrane receptor protein kinase activity	3.26E-03
50	GO:0004345: glucose-6-phosphate dehydrogenase activity	3.26E-03
51	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	4.18E-03
52	GO:0004130: cytochrome-c peroxidase activity	5.18E-03
53	GO:0016688: L-ascorbate peroxidase activity	5.18E-03
54	GO:0080030: methyl indole-3-acetate esterase activity	5.18E-03
55	GO:1990714: hydroxyproline O-galactosyltransferase activity	5.18E-03
56	GO:0004526: ribonuclease P activity	5.18E-03
57	GO:0004709: MAP kinase kinase kinase activity	5.18E-03
58	GO:0016832: aldehyde-lyase activity	6.24E-03
59	GO:0019900: kinase binding	6.24E-03
60	GO:0043022: ribosome binding	8.60E-03
61	GO:0016597: amino acid binding	9.47E-03
62	GO:0008173: RNA methyltransferase activity	9.88E-03
63	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	1.12E-02
64	GO:0030247: polysaccharide binding	1.18E-02
65	GO:0004673: protein histidine kinase activity	1.41E-02
66	GO:0030234: enzyme regulator activity	1.41E-02
67	GO:0008047: enzyme activator activity	1.41E-02
68	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.52E-02
69	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.56E-02
70	GO:0004871: signal transducer activity	1.59E-02
71	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.63E-02
72	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.67E-02
73	GO:0000976: transcription regulatory region sequence-specific DNA binding	1.72E-02
74	GO:0000049: tRNA binding	1.72E-02
75	GO:0015266: protein channel activity	1.88E-02
76	GO:0000155: phosphorelay sensor kinase activity	1.88E-02
77	GO:0050661: NADP binding	1.90E-02
78	GO:0008266: poly(U) RNA binding	2.05E-02
79	GO:0008146: sulfotransferase activity	2.23E-02
80	GO:0043621: protein self-association	2.33E-02
81	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.52E-02
82	GO:0051536: iron-sulfur cluster binding	2.59E-02
83	GO:0031418: L-ascorbic acid binding	2.59E-02
84	GO:0005345: purine nucleobase transmembrane transporter activity	2.78E-02
85	GO:0043424: protein histidine kinase binding	2.78E-02
86	GO:0004176: ATP-dependent peptidase activity	2.97E-02
87	GO:0003964: RNA-directed DNA polymerase activity	2.97E-02
88	GO:0003727: single-stranded RNA binding	3.58E-02
89	GO:0008514: organic anion transmembrane transporter activity	3.58E-02
90	GO:0050660: flavin adenine dinucleotide binding	3.71E-02
91	GO:0047134: protein-disulfide reductase activity	3.79E-02
92	GO:0001085: RNA polymerase II transcription factor binding	4.23E-02
93	GO:0008080: N-acetyltransferase activity	4.23E-02
94	GO:0050662: coenzyme binding	4.45E-02
95	GO:0004791: thioredoxin-disulfide reductase activity	4.45E-02

Rank	GO Term	Adjusted P value
1	GO:0000408: EKC/KEOPS complex	0.00E+00
2	GO:0009537: proplastid	0.00E+00
3	GO:0005948: acetolactate synthase complex	0.00E+00
4	GO:0009507: chloroplast	2.46E-05
5	GO:0009501: amyloplast	2.47E-05
6	GO:0009513: etioplast	1.02E-03
7	GO:0009509: chromoplast	1.67E-03
8	GO:0030139: endocytic vesicle	1.67E-03
9	GO:0032585: multivesicular body membrane	2.42E-03
10	GO:0009986: cell surface	7.39E-03
11	GO:0031305: integral component of mitochondrial inner membrane	8.60E-03
12	GO:0048226: Casparian strip	8.60E-03
13	GO:0030529: intracellular ribonucleoprotein complex	1.00E-02
14	GO:0005680: anaphase-promoting complex	1.12E-02
15	GO:0010494: cytoplasmic stress granule	1.12E-02
16	GO:0009543: chloroplast thylakoid lumen	1.19E-02
17	GO:0016604: nuclear body	1.26E-02
18	GO:0009508: plastid chromosome	1.88E-02
19	GO:0030095: chloroplast photosystem II	2.05E-02
20	GO:0009570: chloroplast stroma	2.29E-02
21	GO:0046658: anchored component of plasma membrane	2.55E-02
22	GO:0042651: thylakoid membrane	2.78E-02
23	GO:0009654: photosystem II oxygen evolving complex	2.78E-02
24	GO:0005744: mitochondrial inner membrane presequence translocase complex	3.58E-02
25	GO:0005886: plasma membrane	4.43E-02
26	GO:0031965: nuclear membrane	4.68E-02
27	GO:0019898: extrinsic component of membrane	4.68E-02