GO Enrichment Analysis of Co-expressed Genes with
AT2G26540
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 3 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 4 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 5 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 6 | GO:0015979: photosynthesis | 8.85E-08 |
| 7 | GO:1901259: chloroplast rRNA processing | 1.86E-06 |
| 8 | GO:0009657: plastid organization | 6.65E-06 |
| 9 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.23E-05 |
| 10 | GO:0006021: inositol biosynthetic process | 4.05E-05 |
| 11 | GO:0010190: cytochrome b6f complex assembly | 9.47E-05 |
| 12 | GO:0006353: DNA-templated transcription, termination | 2.19E-04 |
| 13 | GO:0019252: starch biosynthetic process | 2.33E-04 |
| 14 | GO:0034337: RNA folding | 2.41E-04 |
| 15 | GO:0000476: maturation of 4.5S rRNA | 2.41E-04 |
| 16 | GO:0000967: rRNA 5'-end processing | 2.41E-04 |
| 17 | GO:1902478: negative regulation of defense response to bacterium, incompatible interaction | 2.41E-04 |
| 18 | GO:0006659: phosphatidylserine biosynthetic process | 2.41E-04 |
| 19 | GO:0032544: plastid translation | 2.70E-04 |
| 20 | GO:0032502: developmental process | 2.80E-04 |
| 21 | GO:0010027: thylakoid membrane organization | 4.19E-04 |
| 22 | GO:0015995: chlorophyll biosynthetic process | 5.17E-04 |
| 23 | GO:0009773: photosynthetic electron transport in photosystem I | 5.25E-04 |
| 24 | GO:0034470: ncRNA processing | 5.34E-04 |
| 25 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 5.34E-04 |
| 26 | GO:0006898: receptor-mediated endocytosis | 5.34E-04 |
| 27 | GO:0018026: peptidyl-lysine monomethylation | 5.34E-04 |
| 28 | GO:1904143: positive regulation of carotenoid biosynthetic process | 5.34E-04 |
| 29 | GO:0005977: glycogen metabolic process | 8.68E-04 |
| 30 | GO:0009405: pathogenesis | 8.68E-04 |
| 31 | GO:0006954: inflammatory response | 8.68E-04 |
| 32 | GO:0034051: negative regulation of plant-type hypersensitive response | 8.68E-04 |
| 33 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.16E-03 |
| 34 | GO:0006166: purine ribonucleoside salvage | 1.24E-03 |
| 35 | GO:0006020: inositol metabolic process | 1.24E-03 |
| 36 | GO:0009152: purine ribonucleotide biosynthetic process | 1.24E-03 |
| 37 | GO:0046653: tetrahydrofolate metabolic process | 1.24E-03 |
| 38 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.24E-03 |
| 39 | GO:0006168: adenine salvage | 1.24E-03 |
| 40 | GO:0009765: photosynthesis, light harvesting | 1.65E-03 |
| 41 | GO:0015994: chlorophyll metabolic process | 1.65E-03 |
| 42 | GO:0010107: potassium ion import | 1.65E-03 |
| 43 | GO:0071483: cellular response to blue light | 1.65E-03 |
| 44 | GO:0010021: amylopectin biosynthetic process | 1.65E-03 |
| 45 | GO:0009658: chloroplast organization | 1.74E-03 |
| 46 | GO:0044209: AMP salvage | 2.11E-03 |
| 47 | GO:0006465: signal peptide processing | 2.11E-03 |
| 48 | GO:0098719: sodium ion import across plasma membrane | 2.11E-03 |
| 49 | GO:0006564: L-serine biosynthetic process | 2.11E-03 |
| 50 | GO:0009904: chloroplast accumulation movement | 2.11E-03 |
| 51 | GO:0009791: post-embryonic development | 2.37E-03 |
| 52 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 2.60E-03 |
| 53 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.60E-03 |
| 54 | GO:0046855: inositol phosphate dephosphorylation | 2.60E-03 |
| 55 | GO:1902456: regulation of stomatal opening | 2.60E-03 |
| 56 | GO:0055114: oxidation-reduction process | 3.11E-03 |
| 57 | GO:0009955: adaxial/abaxial pattern specification | 3.12E-03 |
| 58 | GO:0071333: cellular response to glucose stimulus | 3.12E-03 |
| 59 | GO:0048280: vesicle fusion with Golgi apparatus | 3.12E-03 |
| 60 | GO:0009903: chloroplast avoidance movement | 3.12E-03 |
| 61 | GO:0009769: photosynthesis, light harvesting in photosystem II | 3.68E-03 |
| 62 | GO:0009645: response to low light intensity stimulus | 3.68E-03 |
| 63 | GO:0048564: photosystem I assembly | 4.27E-03 |
| 64 | GO:0042255: ribosome assembly | 4.27E-03 |
| 65 | GO:0010078: maintenance of root meristem identity | 4.27E-03 |
| 66 | GO:0055075: potassium ion homeostasis | 4.27E-03 |
| 67 | GO:0071482: cellular response to light stimulus | 4.89E-03 |
| 68 | GO:0043562: cellular response to nitrogen levels | 4.89E-03 |
| 69 | GO:0009821: alkaloid biosynthetic process | 5.54E-03 |
| 70 | GO:0090333: regulation of stomatal closure | 5.54E-03 |
| 71 | GO:0051453: regulation of intracellular pH | 6.21E-03 |
| 72 | GO:0005982: starch metabolic process | 6.21E-03 |
| 73 | GO:0009641: shade avoidance | 6.92E-03 |
| 74 | GO:0006896: Golgi to vacuole transport | 6.92E-03 |
| 75 | GO:0009684: indoleacetic acid biosynthetic process | 7.65E-03 |
| 76 | GO:0019684: photosynthesis, light reaction | 7.65E-03 |
| 77 | GO:0006415: translational termination | 7.65E-03 |
| 78 | GO:0010114: response to red light | 7.79E-03 |
| 79 | GO:0006790: sulfur compound metabolic process | 8.41E-03 |
| 80 | GO:0016024: CDP-diacylglycerol biosynthetic process | 8.41E-03 |
| 81 | GO:0009767: photosynthetic electron transport chain | 9.20E-03 |
| 82 | GO:0010588: cotyledon vascular tissue pattern formation | 9.20E-03 |
| 83 | GO:0048467: gynoecium development | 1.00E-02 |
| 84 | GO:0010143: cutin biosynthetic process | 1.00E-02 |
| 85 | GO:0010207: photosystem II assembly | 1.00E-02 |
| 86 | GO:0007015: actin filament organization | 1.00E-02 |
| 87 | GO:0010223: secondary shoot formation | 1.00E-02 |
| 88 | GO:0009416: response to light stimulus | 1.05E-02 |
| 89 | GO:0006364: rRNA processing | 1.05E-02 |
| 90 | GO:0019853: L-ascorbic acid biosynthetic process | 1.09E-02 |
| 91 | GO:0046854: phosphatidylinositol phosphorylation | 1.09E-02 |
| 92 | GO:0048367: shoot system development | 1.29E-02 |
| 93 | GO:0006418: tRNA aminoacylation for protein translation | 1.35E-02 |
| 94 | GO:0019915: lipid storage | 1.45E-02 |
| 95 | GO:0009269: response to desiccation | 1.45E-02 |
| 96 | GO:0016226: iron-sulfur cluster assembly | 1.54E-02 |
| 97 | GO:0006012: galactose metabolic process | 1.64E-02 |
| 98 | GO:0071215: cellular response to abscisic acid stimulus | 1.64E-02 |
| 99 | GO:0009686: gibberellin biosynthetic process | 1.64E-02 |
| 100 | GO:0009306: protein secretion | 1.74E-02 |
| 101 | GO:0006810: transport | 1.81E-02 |
| 102 | GO:0016117: carotenoid biosynthetic process | 1.84E-02 |
| 103 | GO:0042147: retrograde transport, endosome to Golgi | 1.84E-02 |
| 104 | GO:0005975: carbohydrate metabolic process | 1.91E-02 |
| 105 | GO:0080022: primary root development | 1.95E-02 |
| 106 | GO:0010087: phloem or xylem histogenesis | 1.95E-02 |
| 107 | GO:0009058: biosynthetic process | 1.99E-02 |
| 108 | GO:0009741: response to brassinosteroid | 2.05E-02 |
| 109 | GO:0010268: brassinosteroid homeostasis | 2.05E-02 |
| 110 | GO:0009958: positive gravitropism | 2.05E-02 |
| 111 | GO:0006885: regulation of pH | 2.05E-02 |
| 112 | GO:0006662: glycerol ether metabolic process | 2.05E-02 |
| 113 | GO:0006814: sodium ion transport | 2.16E-02 |
| 114 | GO:0009646: response to absence of light | 2.16E-02 |
| 115 | GO:0009851: auxin biosynthetic process | 2.27E-02 |
| 116 | GO:0006623: protein targeting to vacuole | 2.27E-02 |
| 117 | GO:0048825: cotyledon development | 2.27E-02 |
| 118 | GO:0008654: phospholipid biosynthetic process | 2.27E-02 |
| 119 | GO:0016132: brassinosteroid biosynthetic process | 2.38E-02 |
| 120 | GO:0071554: cell wall organization or biogenesis | 2.38E-02 |
| 121 | GO:0006891: intra-Golgi vesicle-mediated transport | 2.38E-02 |
| 122 | GO:0006413: translational initiation | 2.42E-02 |
| 123 | GO:1901657: glycosyl compound metabolic process | 2.62E-02 |
| 124 | GO:0016125: sterol metabolic process | 2.73E-02 |
| 125 | GO:0008380: RNA splicing | 3.10E-02 |
| 126 | GO:0009735: response to cytokinin | 3.40E-02 |
| 127 | GO:0006888: ER to Golgi vesicle-mediated transport | 3.48E-02 |
| 128 | GO:0009817: defense response to fungus, incompatible interaction | 3.75E-02 |
| 129 | GO:0048481: plant ovule development | 3.75E-02 |
| 130 | GO:0018298: protein-chromophore linkage | 3.75E-02 |
| 131 | GO:0009813: flavonoid biosynthetic process | 3.88E-02 |
| 132 | GO:0010218: response to far red light | 4.01E-02 |
| 133 | GO:0048527: lateral root development | 4.15E-02 |
| 134 | GO:0009637: response to blue light | 4.43E-02 |
| 135 | GO:0009853: photorespiration | 4.43E-02 |
| 136 | GO:0034599: cellular response to oxidative stress | 4.57E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 2 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
| 3 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 4 | GO:0090711: FMN hydrolase activity | 0.00E+00 |
| 5 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 6 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 7 | GO:0016851: magnesium chelatase activity | 2.23E-05 |
| 8 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.05E-05 |
| 9 | GO:0009011: starch synthase activity | 4.05E-05 |
| 10 | GO:0019843: rRNA binding | 7.23E-05 |
| 11 | GO:0051777: ent-kaurenoate oxidase activity | 2.41E-04 |
| 12 | GO:0004856: xylulokinase activity | 2.41E-04 |
| 13 | GO:0005080: protein kinase C binding | 2.41E-04 |
| 14 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 2.41E-04 |
| 15 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 5.34E-04 |
| 16 | GO:0004617: phosphoglycerate dehydrogenase activity | 5.34E-04 |
| 17 | GO:0052832: inositol monophosphate 3-phosphatase activity | 5.34E-04 |
| 18 | GO:0033201: alpha-1,4-glucan synthase activity | 5.34E-04 |
| 19 | GO:0008934: inositol monophosphate 1-phosphatase activity | 5.34E-04 |
| 20 | GO:0052833: inositol monophosphate 4-phosphatase activity | 5.34E-04 |
| 21 | GO:0004512: inositol-3-phosphate synthase activity | 5.34E-04 |
| 22 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 5.34E-04 |
| 23 | GO:0016630: protochlorophyllide reductase activity | 5.34E-04 |
| 24 | GO:0019156: isoamylase activity | 5.34E-04 |
| 25 | GO:0047746: chlorophyllase activity | 5.34E-04 |
| 26 | GO:0008864: formyltetrahydrofolate deformylase activity | 8.68E-04 |
| 27 | GO:0004373: glycogen (starch) synthase activity | 8.68E-04 |
| 28 | GO:0002161: aminoacyl-tRNA editing activity | 8.68E-04 |
| 29 | GO:0090729: toxin activity | 8.68E-04 |
| 30 | GO:0004751: ribose-5-phosphate isomerase activity | 8.68E-04 |
| 31 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 8.68E-04 |
| 32 | GO:0031409: pigment binding | 9.50E-04 |
| 33 | GO:0003999: adenine phosphoribosyltransferase activity | 1.24E-03 |
| 34 | GO:0016149: translation release factor activity, codon specific | 1.24E-03 |
| 35 | GO:0003883: CTP synthase activity | 1.24E-03 |
| 36 | GO:0003727: single-stranded RNA binding | 1.63E-03 |
| 37 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.65E-03 |
| 38 | GO:0045430: chalcone isomerase activity | 1.65E-03 |
| 39 | GO:0016279: protein-lysine N-methyltransferase activity | 1.65E-03 |
| 40 | GO:0016846: carbon-sulfur lyase activity | 2.11E-03 |
| 41 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.11E-03 |
| 42 | GO:0003959: NADPH dehydrogenase activity | 2.11E-03 |
| 43 | GO:0048038: quinone binding | 2.54E-03 |
| 44 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.60E-03 |
| 45 | GO:0004556: alpha-amylase activity | 2.60E-03 |
| 46 | GO:0015081: sodium ion transmembrane transporter activity | 2.60E-03 |
| 47 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 2.60E-03 |
| 48 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 3.12E-03 |
| 49 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.12E-03 |
| 50 | GO:0016168: chlorophyll binding | 3.87E-03 |
| 51 | GO:0004033: aldo-keto reductase (NADP) activity | 4.27E-03 |
| 52 | GO:0016491: oxidoreductase activity | 4.74E-03 |
| 53 | GO:0008135: translation factor activity, RNA binding | 4.89E-03 |
| 54 | GO:0003747: translation release factor activity | 5.54E-03 |
| 55 | GO:0016844: strictosidine synthase activity | 6.21E-03 |
| 56 | GO:0047372: acylglycerol lipase activity | 7.65E-03 |
| 57 | GO:0015386: potassium:proton antiporter activity | 7.65E-03 |
| 58 | GO:0008559: xenobiotic-transporting ATPase activity | 7.65E-03 |
| 59 | GO:0008378: galactosyltransferase activity | 8.41E-03 |
| 60 | GO:0000049: tRNA binding | 8.41E-03 |
| 61 | GO:0043621: protein self-association | 8.43E-03 |
| 62 | GO:0031072: heat shock protein binding | 9.20E-03 |
| 63 | GO:0003725: double-stranded RNA binding | 9.20E-03 |
| 64 | GO:0004022: alcohol dehydrogenase (NAD) activity | 9.20E-03 |
| 65 | GO:0008266: poly(U) RNA binding | 1.00E-02 |
| 66 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.00E-02 |
| 67 | GO:0003824: catalytic activity | 1.10E-02 |
| 68 | GO:0003723: RNA binding | 1.21E-02 |
| 69 | GO:0016787: hydrolase activity | 1.22E-02 |
| 70 | GO:0051536: iron-sulfur cluster binding | 1.26E-02 |
| 71 | GO:0005528: FK506 binding | 1.26E-02 |
| 72 | GO:0004812: aminoacyl-tRNA ligase activity | 1.84E-02 |
| 73 | GO:0047134: protein-disulfide reductase activity | 1.84E-02 |
| 74 | GO:0009055: electron carrier activity | 2.03E-02 |
| 75 | GO:0004791: thioredoxin-disulfide reductase activity | 2.16E-02 |
| 76 | GO:0005525: GTP binding | 2.21E-02 |
| 77 | GO:0008565: protein transporter activity | 2.25E-02 |
| 78 | GO:0015385: sodium:proton antiporter activity | 2.62E-02 |
| 79 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.62E-02 |
| 80 | GO:0005509: calcium ion binding | 2.66E-02 |
| 81 | GO:0016791: phosphatase activity | 2.73E-02 |
| 82 | GO:0016413: O-acetyltransferase activity | 2.98E-02 |
| 83 | GO:0016597: amino acid binding | 2.98E-02 |
| 84 | GO:0003735: structural constituent of ribosome | 3.01E-02 |
| 85 | GO:0003743: translation initiation factor activity | 3.04E-02 |
| 86 | GO:0102483: scopolin beta-glucosidase activity | 3.48E-02 |
| 87 | GO:0004721: phosphoprotein phosphatase activity | 3.48E-02 |
| 88 | GO:0008168: methyltransferase activity | 3.87E-02 |
| 89 | GO:0015238: drug transmembrane transporter activity | 3.88E-02 |
| 90 | GO:0004601: peroxidase activity | 4.01E-02 |
| 91 | GO:0016788: hydrolase activity, acting on ester bonds | 4.09E-02 |
| 92 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 4.15E-02 |
| 93 | GO:0003746: translation elongation factor activity | 4.43E-02 |
| 94 | GO:0008422: beta-glucosidase activity | 4.71E-02 |
| 95 | GO:0000149: SNARE binding | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009571: proplastid stroma | 0.00E+00 |
| 2 | GO:0005835: fatty acid synthase complex | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 2.27E-37 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 2.83E-20 |
| 5 | GO:0009570: chloroplast stroma | 6.70E-14 |
| 6 | GO:0009579: thylakoid | 2.75E-11 |
| 7 | GO:0009534: chloroplast thylakoid | 5.45E-09 |
| 8 | GO:0031977: thylakoid lumen | 1.01E-08 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 1.54E-08 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 4.54E-08 |
| 11 | GO:0009941: chloroplast envelope | 1.68E-06 |
| 12 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 9.29E-06 |
| 13 | GO:0010007: magnesium chelatase complex | 9.82E-06 |
| 14 | GO:0019898: extrinsic component of membrane | 1.27E-05 |
| 15 | GO:0009547: plastid ribosome | 2.41E-04 |
| 16 | GO:0005787: signal peptidase complex | 2.41E-04 |
| 17 | GO:0009344: nitrite reductase complex [NAD(P)H] | 2.41E-04 |
| 18 | GO:0009295: nucleoid | 3.60E-04 |
| 19 | GO:0031969: chloroplast membrane | 5.00E-04 |
| 20 | GO:0009508: plastid chromosome | 6.81E-04 |
| 21 | GO:0030095: chloroplast photosystem II | 7.67E-04 |
| 22 | GO:0030076: light-harvesting complex | 8.57E-04 |
| 23 | GO:0033281: TAT protein transport complex | 8.68E-04 |
| 24 | GO:0030658: transport vesicle membrane | 1.24E-03 |
| 25 | GO:0009517: PSII associated light-harvesting complex II | 1.65E-03 |
| 26 | GO:0009522: photosystem I | 2.21E-03 |
| 27 | GO:0010287: plastoglobule | 3.06E-03 |
| 28 | GO:0012507: ER to Golgi transport vesicle membrane | 4.27E-03 |
| 29 | GO:0009501: amyloplast | 4.27E-03 |
| 30 | GO:0031982: vesicle | 4.27E-03 |
| 31 | GO:0009539: photosystem II reaction center | 4.89E-03 |
| 32 | GO:0005763: mitochondrial small ribosomal subunit | 5.54E-03 |
| 33 | GO:0000311: plastid large ribosomal subunit | 8.41E-03 |
| 34 | GO:0032040: small-subunit processome | 8.41E-03 |
| 35 | GO:0005840: ribosome | 1.01E-02 |
| 36 | GO:0042651: thylakoid membrane | 1.35E-02 |
| 37 | GO:0015935: small ribosomal subunit | 1.45E-02 |
| 38 | GO:0009523: photosystem II | 2.27E-02 |
| 39 | GO:0030529: intracellular ribonucleoprotein complex | 3.10E-02 |
| 40 | GO:0009707: chloroplast outer membrane | 3.75E-02 |
| 41 | GO:0009536: plastid | 4.03E-02 |
| 42 | GO:0000325: plant-type vacuole | 4.15E-02 |