Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G26340

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1905421: regulation of plant organ morphogenesis0.00E+00
2GO:0030155: regulation of cell adhesion0.00E+00
3GO:0018131: oxazole or thiazole biosynthetic process0.00E+00
4GO:1902326: positive regulation of chlorophyll biosynthetic process0.00E+00
5GO:0042821: pyridoxal biosynthetic process0.00E+00
6GO:0017038: protein import0.00E+00
7GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
8GO:0042820: vitamin B6 catabolic process0.00E+00
9GO:1904966: positive regulation of vitamin E biosynthetic process0.00E+00
10GO:1905177: tracheary element differentiation0.00E+00
11GO:0008298: intracellular mRNA localization0.00E+00
12GO:1904964: positive regulation of phytol biosynthetic process0.00E+00
13GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
14GO:0015979: photosynthesis1.07E-05
15GO:0071482: cellular response to light stimulus1.78E-05
16GO:2001141: regulation of RNA biosynthetic process4.51E-05
17GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly4.51E-05
18GO:0009767: photosynthetic electron transport chain8.21E-05
19GO:0045038: protein import into chloroplast thylakoid membrane1.25E-04
20GO:0010189: vitamin E biosynthetic process2.44E-04
21GO:0034337: RNA folding3.60E-04
22GO:2000905: negative regulation of starch metabolic process3.60E-04
23GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process3.60E-04
24GO:0009443: pyridoxal 5'-phosphate salvage3.60E-04
25GO:0051775: response to redox state3.60E-04
26GO:0019544: arginine catabolic process to glutamate3.60E-04
27GO:0000481: maturation of 5S rRNA3.60E-04
28GO:0006659: phosphatidylserine biosynthetic process3.60E-04
29GO:0042371: vitamin K biosynthetic process3.60E-04
30GO:0071461: cellular response to redox state3.60E-04
31GO:0051247: positive regulation of protein metabolic process3.60E-04
32GO:0006605: protein targeting3.97E-04
33GO:0080005: photosystem stoichiometry adjustment7.83E-04
34GO:1904143: positive regulation of carotenoid biosynthetic process7.83E-04
35GO:0010027: thylakoid membrane organization8.76E-04
36GO:0019684: photosynthesis, light reaction9.22E-04
37GO:0043085: positive regulation of catalytic activity9.22E-04
38GO:0006352: DNA-templated transcription, initiation9.22E-04
39GO:0016024: CDP-diacylglycerol biosynthetic process1.05E-03
40GO:0015995: chlorophyll biosynthetic process1.07E-03
41GO:0055114: oxidation-reduction process1.11E-03
42GO:0048281: inflorescence morphogenesis1.27E-03
43GO:0048586: regulation of long-day photoperiodism, flowering1.27E-03
44GO:0006954: inflammatory response1.27E-03
45GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.27E-03
46GO:0010623: programmed cell death involved in cell development1.27E-03
47GO:0005977: glycogen metabolic process1.27E-03
48GO:0006166: purine ribonucleoside salvage1.83E-03
49GO:0006107: oxaloacetate metabolic process1.83E-03
50GO:0009052: pentose-phosphate shunt, non-oxidative branch1.83E-03
51GO:0009226: nucleotide-sugar biosynthetic process1.83E-03
52GO:0010148: transpiration1.83E-03
53GO:0016556: mRNA modification1.83E-03
54GO:0006168: adenine salvage1.83E-03
55GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis1.83E-03
56GO:0007017: microtubule-based process2.05E-03
57GO:0006810: transport2.33E-03
58GO:0010109: regulation of photosynthesis2.45E-03
59GO:0009765: photosynthesis, light harvesting2.45E-03
60GO:2000306: positive regulation of photomorphogenesis2.45E-03
61GO:0006109: regulation of carbohydrate metabolic process2.45E-03
62GO:0010107: potassium ion import2.45E-03
63GO:0031122: cytoplasmic microtubule organization2.45E-03
64GO:0010508: positive regulation of autophagy2.45E-03
65GO:0006546: glycine catabolic process2.45E-03
66GO:0006021: inositol biosynthetic process2.45E-03
67GO:0006734: NADH metabolic process2.45E-03
68GO:0010021: amylopectin biosynthetic process2.45E-03
69GO:0009107: lipoate biosynthetic process3.14E-03
70GO:0044209: AMP salvage3.14E-03
71GO:0006465: signal peptide processing3.14E-03
72GO:0000304: response to singlet oxygen3.14E-03
73GO:0080110: sporopollenin biosynthetic process3.14E-03
74GO:0098719: sodium ion import across plasma membrane3.14E-03
75GO:0006564: L-serine biosynthetic process3.14E-03
76GO:0010236: plastoquinone biosynthetic process3.14E-03
77GO:0006751: glutathione catabolic process3.88E-03
78GO:0010264: myo-inositol hexakisphosphate biosynthetic process3.88E-03
79GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3.88E-03
80GO:0006655: phosphatidylglycerol biosynthetic process3.88E-03
81GO:0032973: amino acid export3.88E-03
82GO:0010190: cytochrome b6f complex assembly3.88E-03
83GO:0000741: karyogamy3.88E-03
84GO:0009228: thiamine biosynthetic process3.88E-03
85GO:0050665: hydrogen peroxide biosynthetic process3.88E-03
86GO:0009646: response to absence of light3.96E-03
87GO:0009791: post-embryonic development4.25E-03
88GO:0019252: starch biosynthetic process4.25E-03
89GO:0008654: phospholipid biosynthetic process4.25E-03
90GO:0009658: chloroplast organization4.29E-03
91GO:0080086: stamen filament development4.67E-03
92GO:1901259: chloroplast rRNA processing4.67E-03
93GO:0009854: oxidative photosynthetic carbon pathway4.67E-03
94GO:0010019: chloroplast-nucleus signaling pathway4.67E-03
95GO:0032502: developmental process4.86E-03
96GO:0043090: amino acid import5.52E-03
97GO:0006614: SRP-dependent cotranslational protein targeting to membrane5.52E-03
98GO:0070370: cellular heat acclimation5.52E-03
99GO:0010103: stomatal complex morphogenesis5.52E-03
100GO:0007155: cell adhesion6.41E-03
101GO:0048564: photosystem I assembly6.41E-03
102GO:0046620: regulation of organ growth6.41E-03
103GO:0009690: cytokinin metabolic process6.41E-03
104GO:0032508: DNA duplex unwinding6.41E-03
105GO:0055075: potassium ion homeostasis6.41E-03
106GO:0009627: systemic acquired resistance7.35E-03
107GO:0001558: regulation of cell growth7.36E-03
108GO:0010204: defense response signaling pathway, resistance gene-independent7.36E-03
109GO:0032544: plastid translation7.36E-03
110GO:0017004: cytochrome complex assembly7.36E-03
111GO:0080144: amino acid homeostasis8.35E-03
112GO:0090333: regulation of stomatal closure8.35E-03
113GO:0006754: ATP biosynthetic process8.35E-03
114GO:0018298: protein-chromophore linkage8.60E-03
115GO:0051453: regulation of intracellular pH9.38E-03
116GO:0006949: syncytium formation1.05E-02
117GO:0019538: protein metabolic process1.05E-02
118GO:0043069: negative regulation of programmed cell death1.05E-02
119GO:0009089: lysine biosynthetic process via diaminopimelate1.16E-02
120GO:0006108: malate metabolic process1.40E-02
121GO:0010143: cutin biosynthetic process1.52E-02
122GO:0010207: photosystem II assembly1.52E-02
123GO:0019853: L-ascorbic acid biosynthetic process1.65E-02
124GO:0010030: positive regulation of seed germination1.65E-02
125GO:0006855: drug transmembrane transport1.65E-02
126GO:0009664: plant-type cell wall organization1.78E-02
127GO:0009944: polarity specification of adaxial/abaxial axis1.92E-02
128GO:0051302: regulation of cell division2.06E-02
129GO:0008299: isoprenoid biosynthetic process2.06E-02
130GO:0010431: seed maturation2.20E-02
131GO:0019915: lipid storage2.20E-02
132GO:0061077: chaperone-mediated protein folding2.20E-02
133GO:0031408: oxylipin biosynthetic process2.20E-02
134GO:0009735: response to cytokinin2.22E-02
135GO:0030245: cellulose catabolic process2.35E-02
136GO:0006730: one-carbon metabolic process2.35E-02
137GO:0006012: galactose metabolic process2.50E-02
138GO:0009686: gibberellin biosynthetic process2.50E-02
139GO:0001944: vasculature development2.50E-02
140GO:0010089: xylem development2.65E-02
141GO:0010584: pollen exine formation2.65E-02
142GO:0019722: calcium-mediated signaling2.65E-02
143GO:0009561: megagametogenesis2.65E-02
144GO:0009306: protein secretion2.65E-02
145GO:0016117: carotenoid biosynthetic process2.81E-02
146GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.81E-02
147GO:0042631: cellular response to water deprivation2.97E-02
148GO:0009741: response to brassinosteroid3.13E-02
149GO:0010268: brassinosteroid homeostasis3.13E-02
150GO:0045489: pectin biosynthetic process3.13E-02
151GO:0006885: regulation of pH3.13E-02
152GO:0006662: glycerol ether metabolic process3.13E-02
153GO:0010197: polar nucleus fusion3.13E-02
154GO:0006814: sodium ion transport3.30E-02
155GO:0016132: brassinosteroid biosynthetic process3.64E-02
156GO:0016042: lipid catabolic process3.75E-02
157GO:0010090: trichome morphogenesis3.99E-02
158GO:0016125: sterol metabolic process4.17E-02
159GO:0009828: plant-type cell wall loosening4.17E-02
160GO:0009409: response to cold4.25E-02
161GO:0007267: cell-cell signaling4.35E-02
162GO:0006413: translational initiation4.36E-02
163GO:0045490: pectin catabolic process4.68E-02
164GO:0010029: regulation of seed germination4.91E-02
RankGO TermAdjusted P value
1GO:0005048: signal sequence binding0.00E+00
2GO:0010349: L-galactose dehydrogenase activity0.00E+00
3GO:0046554: malate dehydrogenase (NADP+) activity0.00E+00
4GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
5GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity0.00E+00
6GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
7GO:0010276: phytol kinase activity0.00E+00
8GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
9GO:0019899: enzyme binding8.28E-06
10GO:0004033: aldo-keto reductase (NADP) activity1.24E-05
11GO:0070402: NADPH binding2.05E-05
12GO:0001053: plastid sigma factor activity8.00E-05
13GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor8.00E-05
14GO:0016987: sigma factor activity8.00E-05
15GO:0043495: protein anchor8.00E-05
16GO:0005528: FK506 binding1.62E-04
17GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity2.44E-04
18GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity3.60E-04
19GO:0046906: tetrapyrrole binding3.60E-04
20GO:0080132: fatty acid alpha-hydroxylase activity3.60E-04
21GO:0051777: ent-kaurenoate oxidase activity3.60E-04
22GO:0008568: microtubule-severing ATPase activity3.60E-04
23GO:0005080: protein kinase C binding3.60E-04
24GO:0008746: NAD(P)+ transhydrogenase activity3.60E-04
25GO:0004328: formamidase activity3.60E-04
26GO:0048038: quinone binding5.49E-04
27GO:0016491: oxidoreductase activity5.94E-04
28GO:0003839: gamma-glutamylcyclotransferase activity7.83E-04
29GO:0004326: tetrahydrofolylpolyglutamate synthase activity7.83E-04
30GO:0004617: phosphoglycerate dehydrogenase activity7.83E-04
31GO:0004047: aminomethyltransferase activity7.83E-04
32GO:0019156: isoamylase activity7.83E-04
33GO:0004512: inositol-3-phosphate synthase activity7.83E-04
34GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase7.83E-04
35GO:0048531: beta-1,3-galactosyltransferase activity7.83E-04
36GO:0031072: heat shock protein binding1.19E-03
37GO:0015462: ATPase-coupled protein transmembrane transporter activity1.27E-03
38GO:0016992: lipoate synthase activity1.27E-03
39GO:0004751: ribose-5-phosphate isomerase activity1.27E-03
40GO:0019843: rRNA binding1.34E-03
41GO:0008266: poly(U) RNA binding1.34E-03
42GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity1.83E-03
43GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity1.83E-03
44GO:0003999: adenine phosphoribosyltransferase activity1.83E-03
45GO:0016851: magnesium chelatase activity1.83E-03
46GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.83E-03
47GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity1.83E-03
48GO:0008453: alanine-glyoxylate transaminase activity2.45E-03
49GO:0004045: aminoacyl-tRNA hydrolase activity2.45E-03
50GO:0019199: transmembrane receptor protein kinase activity2.45E-03
51GO:0009011: starch synthase activity2.45E-03
52GO:0042277: peptide binding2.45E-03
53GO:0008891: glycolate oxidase activity2.45E-03
54GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity2.45E-03
55GO:0022891: substrate-specific transmembrane transporter activity2.69E-03
56GO:0030570: pectate lyase activity2.69E-03
57GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.77E-03
58GO:0003924: GTPase activity2.80E-03
59GO:0016846: carbon-sulfur lyase activity3.14E-03
60GO:0042802: identical protein binding3.17E-03
61GO:0003824: catalytic activity3.57E-03
62GO:0004605: phosphatidate cytidylyltransferase activity3.88E-03
63GO:0004366: glycerol-3-phosphate O-acyltransferase activity3.88E-03
64GO:0004556: alpha-amylase activity3.88E-03
65GO:0004462: lactoylglutathione lyase activity3.88E-03
66GO:0015081: sodium ion transmembrane transporter activity3.88E-03
67GO:0016615: malate dehydrogenase activity3.88E-03
68GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity3.88E-03
69GO:0008200: ion channel inhibitor activity3.88E-03
70GO:0030060: L-malate dehydrogenase activity4.67E-03
71GO:0005200: structural constituent of cytoskeleton5.86E-03
72GO:0005525: GTP binding5.90E-03
73GO:0008312: 7S RNA binding6.41E-03
74GO:0016168: chlorophyll binding6.96E-03
75GO:0008135: translation factor activity, RNA binding7.36E-03
76GO:0005509: calcium ion binding7.56E-03
77GO:0016829: lyase activity7.68E-03
78GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism8.35E-03
79GO:0015238: drug transmembrane transporter activity9.04E-03
80GO:0004743: pyruvate kinase activity9.38E-03
81GO:0030955: potassium ion binding9.38E-03
82GO:0008047: enzyme activator activity1.05E-02
83GO:0015020: glucuronosyltransferase activity1.05E-02
84GO:0003993: acid phosphatase activity1.14E-02
85GO:0015386: potassium:proton antiporter activity1.16E-02
86GO:0008378: galactosyltransferase activity1.28E-02
87GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.52E-02
88GO:0035091: phosphatidylinositol binding1.53E-02
89GO:0016788: hydrolase activity, acting on ester bonds1.87E-02
90GO:0003729: mRNA binding1.90E-02
91GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.91E-02
92GO:0004857: enzyme inhibitor activity1.92E-02
93GO:0008810: cellulase activity2.50E-02
94GO:0052689: carboxylic ester hydrolase activity2.71E-02
95GO:0051082: unfolded protein binding2.72E-02
96GO:0016746: transferase activity, transferring acyl groups2.80E-02
97GO:0047134: protein-disulfide reductase activity2.81E-02
98GO:0008080: N-acetyltransferase activity3.13E-02
99GO:0003735: structural constituent of ribosome3.27E-02
100GO:0004791: thioredoxin-disulfide reductase activity3.30E-02
101GO:0016853: isomerase activity3.30E-02
102GO:0010181: FMN binding3.30E-02
103GO:0050662: coenzyme binding3.30E-02
104GO:0015385: sodium:proton antiporter activity3.99E-02
105GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.99E-02
106GO:0016791: phosphatase activity4.17E-02
107GO:0009055: electron carrier activity4.24E-02
108GO:0008483: transaminase activity4.35E-02
109GO:0016722: oxidoreductase activity, oxidizing metal ions4.35E-02
110GO:0015297: antiporter activity4.47E-02
111GO:0016597: amino acid binding4.54E-02
RankGO TermAdjusted P value
1GO:0010368: chloroplast isoamylase complex0.00E+00
2GO:0009344: nitrite reductase complex [NAD(P)H]0.00E+00
3GO:0009507: chloroplast5.22E-37
4GO:0009570: chloroplast stroma4.88E-22
5GO:0009535: chloroplast thylakoid membrane3.55E-18
6GO:0009579: thylakoid2.11E-16
7GO:0009543: chloroplast thylakoid lumen1.71E-11
8GO:0009654: photosystem II oxygen evolving complex6.06E-11
9GO:0009941: chloroplast envelope7.48E-11
10GO:0019898: extrinsic component of membrane5.17E-08
11GO:0031977: thylakoid lumen8.39E-08
12GO:0009534: chloroplast thylakoid1.24E-06
13GO:0030095: chloroplast photosystem II3.34E-06
14GO:0080085: signal recognition particle, chloroplast targeting5.84E-06
15GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)2.46E-05
16GO:0031969: chloroplast membrane5.47E-05
17GO:0005787: signal peptidase complex3.60E-04
18GO:0009547: plastid ribosome3.60E-04
19GO:0005786: signal recognition particle, endoplasmic reticulum targeting4.86E-04
20GO:0010319: stromule7.57E-04
21GO:0005840: ribosome1.04E-03
22GO:0010007: magnesium chelatase complex1.27E-03
23GO:0048046: apoplast1.27E-03
24GO:0015630: microtubule cytoskeleton1.83E-03
25GO:0042651: thylakoid membrane2.05E-03
26GO:0016020: membrane2.08E-03
27GO:0009523: photosystem II4.25E-03
28GO:0009505: plant-type cell wall4.75E-03
29GO:0030529: intracellular ribonucleoprotein complex6.58E-03
30GO:0009539: photosystem II reaction center7.36E-03
31GO:0045298: tubulin complex8.35E-03
32GO:0005618: cell wall9.96E-03
33GO:0000311: plastid large ribosomal subunit1.28E-02
34GO:0032040: small-subunit processome1.28E-02
35GO:0009508: plastid chromosome1.40E-02
36GO:0046658: anchored component of plasma membrane1.50E-02
37GO:0043234: protein complex1.78E-02
38GO:0005874: microtubule2.29E-02
39GO:0009522: photosystem I3.30E-02
40GO:0009295: nucleoid4.35E-02
41GO:0031225: anchored component of membrane4.84E-02
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Gene type



Gene DE type