Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G25920

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0060966: regulation of gene silencing by RNA0.00E+00
2GO:0070829: heterochromatin maintenance0.00E+00
3GO:0071360: cellular response to exogenous dsRNA0.00E+00
4GO:1900370: positive regulation of RNA interference0.00E+00
5GO:0035563: positive regulation of chromatin binding0.00E+00
6GO:0009606: tropism0.00E+00
7GO:1900368: regulation of RNA interference2.53E-05
8GO:0009729: detection of brassinosteroid stimulus2.53E-05
9GO:0048657: anther wall tapetum cell differentiation2.53E-05
10GO:0010541: acropetal auxin transport6.44E-05
11GO:1900111: positive regulation of histone H3-K9 dimethylation6.44E-05
12GO:0010424: DNA methylation on cytosine within a CG sequence6.44E-05
13GO:0010069: zygote asymmetric cytokinesis in embryo sac6.44E-05
14GO:1900140: regulation of seedling development1.13E-04
15GO:0032776: DNA methylation on cytosine1.13E-04
16GO:0060968: regulation of gene silencing1.13E-04
17GO:0006168: adenine salvage1.69E-04
18GO:0060964: regulation of gene silencing by miRNA1.69E-04
19GO:1902476: chloride transmembrane transport1.69E-04
20GO:0006166: purine ribonucleoside salvage1.69E-04
21GO:0009855: determination of bilateral symmetry1.69E-04
22GO:0060548: negative regulation of cell death2.30E-04
23GO:0031935: regulation of chromatin silencing2.30E-04
24GO:0044209: AMP salvage2.95E-04
25GO:0009959: negative gravitropism3.65E-04
26GO:0010315: auxin efflux3.65E-04
27GO:0035435: phosphate ion transmembrane transport3.65E-04
28GO:0009955: adaxial/abaxial pattern specification4.36E-04
29GO:0080060: integument development4.36E-04
30GO:0010014: meristem initiation4.36E-04
31GO:0006880: intracellular sequestering of iron ion5.11E-04
32GO:0010196: nonphotochemical quenching5.11E-04
33GO:0080111: DNA demethylation5.11E-04
34GO:0006826: iron ion transport5.11E-04
35GO:0006821: chloride transport5.11E-04
36GO:0048766: root hair initiation5.89E-04
37GO:0030091: protein repair5.89E-04
38GO:0007389: pattern specification process6.69E-04
39GO:0006349: regulation of gene expression by genetic imprinting8.38E-04
40GO:0030422: production of siRNA involved in RNA interference9.24E-04
41GO:0051555: flavonol biosynthetic process9.24E-04
42GO:0006879: cellular iron ion homeostasis1.01E-03
43GO:0030148: sphingolipid biosynthetic process1.01E-03
44GO:0010216: maintenance of DNA methylation1.01E-03
45GO:0010072: primary shoot apical meristem specification1.01E-03
46GO:0010540: basipetal auxin transport1.30E-03
47GO:0010039: response to iron ion1.40E-03
48GO:0080188: RNA-directed DNA methylation1.40E-03
49GO:0009944: polarity specification of adaxial/abaxial axis1.61E-03
50GO:0006306: DNA methylation1.83E-03
51GO:0009294: DNA mediated transformation2.06E-03
52GO:0010082: regulation of root meristem growth2.06E-03
53GO:0010584: pollen exine formation2.18E-03
54GO:0048366: leaf development2.34E-03
55GO:0010268: brassinosteroid homeostasis2.55E-03
56GO:0008360: regulation of cell shape2.55E-03
57GO:0009958: positive gravitropism2.55E-03
58GO:0055072: iron ion homeostasis2.80E-03
59GO:0000302: response to reactive oxygen species2.94E-03
60GO:0009630: gravitropism3.07E-03
61GO:0010252: auxin homeostasis3.34E-03
62GO:0009639: response to red or far red light3.34E-03
63GO:0006464: cellular protein modification process3.34E-03
64GO:0009911: positive regulation of flower development3.77E-03
65GO:0016311: dephosphorylation4.36E-03
66GO:0048767: root hair elongation4.67E-03
67GO:0010043: response to zinc ion4.99E-03
68GO:0007568: aging4.99E-03
69GO:0009910: negative regulation of flower development4.99E-03
70GO:0006897: endocytosis5.98E-03
71GO:0042542: response to hydrogen peroxide6.15E-03
72GO:0009926: auxin polar transport6.32E-03
73GO:0009736: cytokinin-activated signaling pathway7.78E-03
74GO:0010224: response to UV-B7.97E-03
75GO:0016569: covalent chromatin modification9.54E-03
76GO:0018105: peptidyl-serine phosphorylation1.02E-02
77GO:0009742: brassinosteroid mediated signaling pathway1.04E-02
78GO:0009845: seed germination1.23E-02
79GO:0009451: RNA modification1.49E-02
80GO:0009617: response to bacterium1.66E-02
81GO:0009826: unidimensional cell growth1.94E-02
82GO:0007049: cell cycle2.16E-02
83GO:0080167: response to karrikin2.32E-02
84GO:0015979: photosynthesis2.55E-02
85GO:0009737: response to abscisic acid2.76E-02
86GO:0048364: root development3.16E-02
87GO:0009734: auxin-activated signaling pathway3.92E-02
88GO:0009908: flower development4.30E-02
89GO:0009735: response to cytokinin4.33E-02
90GO:0009416: response to light stimulus4.62E-02
RankGO TermAdjusted P value
1GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity0.00E+00
2GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity2.53E-05
3GO:0047560: 3-dehydrosphinganine reductase activity2.53E-05
4GO:0008199: ferric iron binding1.69E-04
5GO:0004322: ferroxidase activity1.69E-04
6GO:0003999: adenine phosphoribosyltransferase activity1.69E-04
7GO:0005253: anion channel activity2.30E-04
8GO:0016279: protein-lysine N-methyltransferase activity2.30E-04
9GO:0005496: steroid binding2.95E-04
10GO:0005247: voltage-gated chloride channel activity3.65E-04
11GO:0003886: DNA (cytosine-5-)-methyltransferase activity4.36E-04
12GO:0004714: transmembrane receptor protein tyrosine kinase activity5.89E-04
13GO:0009672: auxin:proton symporter activity8.38E-04
14GO:0015114: phosphate ion transmembrane transporter activity1.20E-03
15GO:0010329: auxin efflux transmembrane transporter activity1.20E-03
16GO:0018024: histone-lysine N-methyltransferase activity2.30E-03
17GO:0004672: protein kinase activity3.27E-03
18GO:0003993: acid phosphatase activity5.47E-03
19GO:0080043: quercetin 3-O-glucosyltransferase activity9.34E-03
20GO:0080044: quercetin 7-O-glucosyltransferase activity9.34E-03
21GO:0004650: polygalacturonase activity9.34E-03
22GO:0004386: helicase activity1.06E-02
23GO:0016829: lyase activity1.23E-02
24GO:0004674: protein serine/threonine kinase activity1.52E-02
25GO:0008194: UDP-glycosyltransferase activity1.58E-02
26GO:0042802: identical protein binding1.73E-02
27GO:0008168: methyltransferase activity1.94E-02
28GO:0046982: protein heterodimerization activity1.97E-02
29GO:0003682: chromatin binding2.07E-02
30GO:0042803: protein homodimerization activity2.73E-02
31GO:0004722: protein serine/threonine phosphatase activity2.82E-02
32GO:0004519: endonuclease activity3.26E-02
33GO:0008289: lipid binding3.88E-02
RankGO TermAdjusted P value
1GO:0070176: DRM complex0.00E+00
2GO:0090577: RNA polymerase IV transcription factor complex0.00E+00
3GO:0031618: nuclear pericentric heterochromatin0.00E+00
4GO:0012506: vesicle membrane2.53E-05
5GO:0016328: lateral plasma membrane1.13E-04
6GO:0034707: chloride channel complex3.65E-04
7GO:0009986: cell surface5.11E-04
8GO:0000123: histone acetyltransferase complex5.11E-04
9GO:0000419: DNA-directed RNA polymerase V complex1.50E-03
10GO:0043234: protein complex1.50E-03
11GO:0000775: chromosome, centromeric region1.95E-03
12GO:0043231: intracellular membrane-bounded organelle3.97E-03
13GO:0010008: endosome membrane8.93E-03
14GO:0009506: plasmodesma1.50E-02
15GO:0031969: chloroplast membrane2.32E-02
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Gene type



Gene DE type