GO Enrichment Analysis of Co-expressed Genes with
AT2G25060
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 2 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 3 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 4 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 5 | GO:0015995: chlorophyll biosynthetic process | 3.05E-05 |
| 6 | GO:0010442: guard cell morphogenesis | 5.64E-05 |
| 7 | GO:0042759: long-chain fatty acid biosynthetic process | 5.64E-05 |
| 8 | GO:0006631: fatty acid metabolic process | 6.78E-05 |
| 9 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.37E-04 |
| 10 | GO:0052541: plant-type cell wall cellulose metabolic process | 1.37E-04 |
| 11 | GO:0019388: galactose catabolic process | 1.37E-04 |
| 12 | GO:1900033: negative regulation of trichome patterning | 1.37E-04 |
| 13 | GO:2000123: positive regulation of stomatal complex development | 1.37E-04 |
| 14 | GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process | 2.34E-04 |
| 15 | GO:0006696: ergosterol biosynthetic process | 2.34E-04 |
| 16 | GO:0006241: CTP biosynthetic process | 3.41E-04 |
| 17 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 3.41E-04 |
| 18 | GO:0006165: nucleoside diphosphate phosphorylation | 3.41E-04 |
| 19 | GO:0006228: UTP biosynthetic process | 3.41E-04 |
| 20 | GO:0010088: phloem development | 3.41E-04 |
| 21 | GO:0046739: transport of virus in multicellular host | 3.41E-04 |
| 22 | GO:0009590: detection of gravity | 3.41E-04 |
| 23 | GO:0007231: osmosensory signaling pathway | 3.41E-04 |
| 24 | GO:0009765: photosynthesis, light harvesting | 4.56E-04 |
| 25 | GO:0006183: GTP biosynthetic process | 4.56E-04 |
| 26 | GO:0033500: carbohydrate homeostasis | 4.56E-04 |
| 27 | GO:2000038: regulation of stomatal complex development | 4.56E-04 |
| 28 | GO:0048629: trichome patterning | 4.56E-04 |
| 29 | GO:0010375: stomatal complex patterning | 5.78E-04 |
| 30 | GO:0016120: carotene biosynthetic process | 5.78E-04 |
| 31 | GO:0000304: response to singlet oxygen | 5.78E-04 |
| 32 | GO:0048497: maintenance of floral organ identity | 5.78E-04 |
| 33 | GO:0016123: xanthophyll biosynthetic process | 5.78E-04 |
| 34 | GO:0009817: defense response to fungus, incompatible interaction | 6.92E-04 |
| 35 | GO:0009658: chloroplast organization | 7.02E-04 |
| 36 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 7.07E-04 |
| 37 | GO:0009913: epidermal cell differentiation | 7.07E-04 |
| 38 | GO:0033365: protein localization to organelle | 7.07E-04 |
| 39 | GO:0010405: arabinogalactan protein metabolic process | 7.07E-04 |
| 40 | GO:0009813: flavonoid biosynthetic process | 7.26E-04 |
| 41 | GO:0005978: glycogen biosynthetic process | 1.13E-03 |
| 42 | GO:0010497: plasmodesmata-mediated intercellular transport | 1.29E-03 |
| 43 | GO:0006526: arginine biosynthetic process | 1.29E-03 |
| 44 | GO:0032544: plastid translation | 1.29E-03 |
| 45 | GO:0009835: fruit ripening | 1.45E-03 |
| 46 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.62E-03 |
| 47 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.79E-03 |
| 48 | GO:0009641: shade avoidance | 1.79E-03 |
| 49 | GO:0006816: calcium ion transport | 1.97E-03 |
| 50 | GO:0009073: aromatic amino acid family biosynthetic process | 1.97E-03 |
| 51 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.97E-03 |
| 52 | GO:0005983: starch catabolic process | 2.16E-03 |
| 53 | GO:0009742: brassinosteroid mediated signaling pathway | 2.19E-03 |
| 54 | GO:0006006: glucose metabolic process | 2.36E-03 |
| 55 | GO:0010020: chloroplast fission | 2.56E-03 |
| 56 | GO:0070588: calcium ion transmembrane transport | 2.76E-03 |
| 57 | GO:0010025: wax biosynthetic process | 2.97E-03 |
| 58 | GO:0006071: glycerol metabolic process | 2.97E-03 |
| 59 | GO:0006633: fatty acid biosynthetic process | 3.23E-03 |
| 60 | GO:0010026: trichome differentiation | 3.40E-03 |
| 61 | GO:0031408: oxylipin biosynthetic process | 3.63E-03 |
| 62 | GO:0048511: rhythmic process | 3.63E-03 |
| 63 | GO:0009693: ethylene biosynthetic process | 4.10E-03 |
| 64 | GO:0009411: response to UV | 4.10E-03 |
| 65 | GO:0016117: carotenoid biosynthetic process | 4.58E-03 |
| 66 | GO:0000413: protein peptidyl-prolyl isomerization | 4.83E-03 |
| 67 | GO:0006520: cellular amino acid metabolic process | 5.09E-03 |
| 68 | GO:0048544: recognition of pollen | 5.35E-03 |
| 69 | GO:0042752: regulation of circadian rhythm | 5.35E-03 |
| 70 | GO:0048825: cotyledon development | 5.61E-03 |
| 71 | GO:0019252: starch biosynthetic process | 5.61E-03 |
| 72 | GO:0032502: developmental process | 6.15E-03 |
| 73 | GO:0071281: cellular response to iron ion | 6.43E-03 |
| 74 | GO:0007267: cell-cell signaling | 7.00E-03 |
| 75 | GO:0006629: lipid metabolic process | 1.00E-02 |
| 76 | GO:0006839: mitochondrial transport | 1.18E-02 |
| 77 | GO:0042542: response to hydrogen peroxide | 1.25E-02 |
| 78 | GO:0000165: MAPK cascade | 1.48E-02 |
| 79 | GO:0009585: red, far-red light phototransduction | 1.59E-02 |
| 80 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.63E-02 |
| 81 | GO:0009845: seed germination | 2.54E-02 |
| 82 | GO:0009790: embryo development | 2.68E-02 |
| 83 | GO:0040008: regulation of growth | 2.92E-02 |
| 84 | GO:0007623: circadian rhythm | 3.02E-02 |
| 85 | GO:0006470: protein dephosphorylation | 3.32E-02 |
| 86 | GO:0042742: defense response to bacterium | 3.61E-02 |
| 87 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 3.90E-02 |
| 88 | GO:0048366: leaf development | 4.62E-02 |
| 89 | GO:0009409: response to cold | 4.86E-02 |
| 90 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 2 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 3 | GO:0005504: fatty acid binding | 7.23E-07 |
| 4 | GO:0045430: chalcone isomerase activity | 3.37E-06 |
| 5 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 5.64E-05 |
| 6 | GO:0050308: sugar-phosphatase activity | 5.64E-05 |
| 7 | GO:0009374: biotin binding | 5.64E-05 |
| 8 | GO:0019203: carbohydrate phosphatase activity | 5.64E-05 |
| 9 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 5.64E-05 |
| 10 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 5.64E-05 |
| 11 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 1.37E-04 |
| 12 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 1.37E-04 |
| 13 | GO:0004614: phosphoglucomutase activity | 1.37E-04 |
| 14 | GO:0070330: aromatase activity | 2.34E-04 |
| 15 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.34E-04 |
| 16 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 2.34E-04 |
| 17 | GO:0016851: magnesium chelatase activity | 3.41E-04 |
| 18 | GO:0004550: nucleoside diphosphate kinase activity | 3.41E-04 |
| 19 | GO:0043023: ribosomal large subunit binding | 3.41E-04 |
| 20 | GO:0018685: alkane 1-monooxygenase activity | 5.78E-04 |
| 21 | GO:0003989: acetyl-CoA carboxylase activity | 5.78E-04 |
| 22 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 7.07E-04 |
| 23 | GO:2001070: starch binding | 7.07E-04 |
| 24 | GO:0051920: peroxiredoxin activity | 8.44E-04 |
| 25 | GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity | 1.13E-03 |
| 26 | GO:0030674: protein binding, bridging | 1.13E-03 |
| 27 | GO:0016209: antioxidant activity | 1.13E-03 |
| 28 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 1.45E-03 |
| 29 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 1.45E-03 |
| 30 | GO:0047372: acylglycerol lipase activity | 1.97E-03 |
| 31 | GO:0015266: protein channel activity | 2.36E-03 |
| 32 | GO:0005262: calcium channel activity | 2.36E-03 |
| 33 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.65E-03 |
| 34 | GO:0030170: pyridoxal phosphate binding | 2.86E-03 |
| 35 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 2.93E-03 |
| 36 | GO:0043424: protein histidine kinase binding | 3.40E-03 |
| 37 | GO:0042802: identical protein binding | 4.50E-03 |
| 38 | GO:0005507: copper ion binding | 4.77E-03 |
| 39 | GO:0001085: RNA polymerase II transcription factor binding | 5.09E-03 |
| 40 | GO:0000287: magnesium ion binding | 5.37E-03 |
| 41 | GO:0019901: protein kinase binding | 5.61E-03 |
| 42 | GO:0008483: transaminase activity | 7.00E-03 |
| 43 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 9.13E-03 |
| 44 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.01E-02 |
| 45 | GO:0003746: translation elongation factor activity | 1.08E-02 |
| 46 | GO:0046983: protein dimerization activity | 1.08E-02 |
| 47 | GO:0004185: serine-type carboxypeptidase activity | 1.29E-02 |
| 48 | GO:0043621: protein self-association | 1.36E-02 |
| 49 | GO:0005198: structural molecule activity | 1.40E-02 |
| 50 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.44E-02 |
| 51 | GO:0051287: NAD binding | 1.48E-02 |
| 52 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.83E-02 |
| 53 | GO:0004650: polygalacturonase activity | 1.92E-02 |
| 54 | GO:0016758: transferase activity, transferring hexosyl groups | 2.35E-02 |
| 55 | GO:0030246: carbohydrate binding | 2.40E-02 |
| 56 | GO:0019825: oxygen binding | 2.54E-02 |
| 57 | GO:0005506: iron ion binding | 3.55E-02 |
| 58 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.58E-02 |
| 59 | GO:0044212: transcription regulatory region DNA binding | 3.61E-02 |
| 60 | GO:0003824: catalytic activity | 3.95E-02 |
| 61 | GO:0004601: peroxidase activity | 4.12E-02 |
| 62 | GO:0003682: chromatin binding | 4.29E-02 |
| 63 | GO:0004497: monooxygenase activity | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009570: chloroplast stroma | 9.28E-13 |
| 2 | GO:0009507: chloroplast | 7.46E-12 |
| 3 | GO:0009941: chloroplast envelope | 3.67E-10 |
| 4 | GO:0009534: chloroplast thylakoid | 5.07E-07 |
| 5 | GO:0009579: thylakoid | 9.27E-05 |
| 6 | GO:0010007: magnesium chelatase complex | 2.34E-04 |
| 7 | GO:0009317: acetyl-CoA carboxylase complex | 2.34E-04 |
| 8 | GO:0031969: chloroplast membrane | 9.16E-04 |
| 9 | GO:0009533: chloroplast stromal thylakoid | 9.85E-04 |
| 10 | GO:0009536: plastid | 1.98E-03 |
| 11 | GO:0043234: protein complex | 2.97E-03 |
| 12 | GO:0042651: thylakoid membrane | 3.40E-03 |
| 13 | GO:0009532: plastid stroma | 3.63E-03 |
| 14 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 4.34E-03 |
| 15 | GO:0046658: anchored component of plasma membrane | 4.68E-03 |
| 16 | GO:0010319: stromule | 7.00E-03 |
| 17 | GO:0016021: integral component of membrane | 8.18E-03 |
| 18 | GO:0005667: transcription factor complex | 8.19E-03 |
| 19 | GO:0005743: mitochondrial inner membrane | 9.30E-03 |
| 20 | GO:0031977: thylakoid lumen | 1.22E-02 |
| 21 | GO:0009535: chloroplast thylakoid membrane | 2.07E-02 |
| 22 | GO:0010287: plastoglobule | 2.31E-02 |
| 23 | GO:0009543: chloroplast thylakoid lumen | 2.40E-02 |
| 24 | GO:0031225: anchored component of membrane | 2.78E-02 |
| 25 | GO:0005615: extracellular space | 3.27E-02 |
| 26 | GO:0005874: microtubule | 4.68E-02 |