GO Enrichment Analysis of Co-expressed Genes with
AT2G25000
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0097237: cellular response to toxic substance | 0.00E+00 |
| 2 | GO:0002376: immune system process | 0.00E+00 |
| 3 | GO:0009636: response to toxic substance | 1.69E-05 |
| 4 | GO:0010112: regulation of systemic acquired resistance | 9.24E-05 |
| 5 | GO:0009700: indole phytoalexin biosynthetic process | 1.02E-04 |
| 6 | GO:0034214: protein hexamerization | 1.02E-04 |
| 7 | GO:0010311: lateral root formation | 1.28E-04 |
| 8 | GO:0009407: toxin catabolic process | 1.37E-04 |
| 9 | GO:0009617: response to bacterium | 1.81E-04 |
| 10 | GO:0006952: defense response | 2.03E-04 |
| 11 | GO:0009838: abscission | 2.40E-04 |
| 12 | GO:0019632: shikimate metabolic process | 2.40E-04 |
| 13 | GO:0010366: negative regulation of ethylene biosynthetic process | 3.99E-04 |
| 14 | GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process | 3.99E-04 |
| 15 | GO:0002230: positive regulation of defense response to virus by host | 3.99E-04 |
| 16 | GO:0009653: anatomical structure morphogenesis | 3.99E-04 |
| 17 | GO:1902290: positive regulation of defense response to oomycetes | 5.73E-04 |
| 18 | GO:0070301: cellular response to hydrogen peroxide | 5.73E-04 |
| 19 | GO:0006623: protein targeting to vacuole | 7.51E-04 |
| 20 | GO:0010188: response to microbial phytotoxin | 7.62E-04 |
| 21 | GO:0006621: protein retention in ER lumen | 7.62E-04 |
| 22 | GO:0010600: regulation of auxin biosynthetic process | 7.62E-04 |
| 23 | GO:1901002: positive regulation of response to salt stress | 7.62E-04 |
| 24 | GO:0008152: metabolic process | 8.26E-04 |
| 25 | GO:0031365: N-terminal protein amino acid modification | 9.62E-04 |
| 26 | GO:0009164: nucleoside catabolic process | 9.62E-04 |
| 27 | GO:0000304: response to singlet oxygen | 9.62E-04 |
| 28 | GO:0006979: response to oxidative stress | 1.14E-03 |
| 29 | GO:0002238: response to molecule of fungal origin | 1.17E-03 |
| 30 | GO:0009423: chorismate biosynthetic process | 1.40E-03 |
| 31 | GO:0009813: flavonoid biosynthetic process | 1.54E-03 |
| 32 | GO:1900057: positive regulation of leaf senescence | 1.65E-03 |
| 33 | GO:1900056: negative regulation of leaf senescence | 1.65E-03 |
| 34 | GO:0007568: aging | 1.69E-03 |
| 35 | GO:0043068: positive regulation of programmed cell death | 1.90E-03 |
| 36 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.90E-03 |
| 37 | GO:0030091: protein repair | 1.90E-03 |
| 38 | GO:0050832: defense response to fungus | 2.16E-03 |
| 39 | GO:0010120: camalexin biosynthetic process | 2.17E-03 |
| 40 | GO:0010204: defense response signaling pathway, resistance gene-independent | 2.17E-03 |
| 41 | GO:0030968: endoplasmic reticulum unfolded protein response | 2.17E-03 |
| 42 | GO:0009835: fruit ripening | 2.45E-03 |
| 43 | GO:0046685: response to arsenic-containing substance | 2.45E-03 |
| 44 | GO:0051865: protein autoubiquitination | 2.45E-03 |
| 45 | GO:1900426: positive regulation of defense response to bacterium | 2.74E-03 |
| 46 | GO:0055114: oxidation-reduction process | 2.98E-03 |
| 47 | GO:0006812: cation transport | 2.98E-03 |
| 48 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 3.05E-03 |
| 49 | GO:0019538: protein metabolic process | 3.05E-03 |
| 50 | GO:0006813: potassium ion transport | 3.19E-03 |
| 51 | GO:0009073: aromatic amino acid family biosynthetic process | 3.36E-03 |
| 52 | GO:0071365: cellular response to auxin stimulus | 3.69E-03 |
| 53 | GO:0008361: regulation of cell size | 3.69E-03 |
| 54 | GO:0012501: programmed cell death | 3.69E-03 |
| 55 | GO:0009737: response to abscisic acid | 4.24E-03 |
| 56 | GO:0042343: indole glucosinolate metabolic process | 4.72E-03 |
| 57 | GO:0006468: protein phosphorylation | 4.82E-03 |
| 58 | GO:0042742: defense response to bacterium | 4.91E-03 |
| 59 | GO:0000162: tryptophan biosynthetic process | 5.09E-03 |
| 60 | GO:0080147: root hair cell development | 5.46E-03 |
| 61 | GO:0043622: cortical microtubule organization | 5.85E-03 |
| 62 | GO:0098542: defense response to other organism | 6.24E-03 |
| 63 | GO:0071456: cellular response to hypoxia | 6.64E-03 |
| 64 | GO:0009625: response to insect | 7.06E-03 |
| 65 | GO:0006012: galactose metabolic process | 7.06E-03 |
| 66 | GO:0009693: ethylene biosynthetic process | 7.06E-03 |
| 67 | GO:0008284: positive regulation of cell proliferation | 7.91E-03 |
| 68 | GO:0042391: regulation of membrane potential | 8.35E-03 |
| 69 | GO:0009611: response to wounding | 8.61E-03 |
| 70 | GO:0006520: cellular amino acid metabolic process | 8.80E-03 |
| 71 | GO:0006662: glycerol ether metabolic process | 8.80E-03 |
| 72 | GO:0046323: glucose import | 8.80E-03 |
| 73 | GO:0006885: regulation of pH | 8.80E-03 |
| 74 | GO:0007166: cell surface receptor signaling pathway | 8.93E-03 |
| 75 | GO:0006814: sodium ion transport | 9.26E-03 |
| 76 | GO:0009851: auxin biosynthetic process | 9.73E-03 |
| 77 | GO:0000302: response to reactive oxygen species | 1.02E-02 |
| 78 | GO:0006464: cellular protein modification process | 1.17E-02 |
| 79 | GO:0051607: defense response to virus | 1.27E-02 |
| 80 | GO:0009615: response to virus | 1.32E-02 |
| 81 | GO:0009627: systemic acquired resistance | 1.43E-02 |
| 82 | GO:0010200: response to chitin | 1.55E-02 |
| 83 | GO:0006886: intracellular protein transport | 1.86E-02 |
| 84 | GO:0034599: cellular response to oxidative stress | 1.95E-02 |
| 85 | GO:0009414: response to water deprivation | 1.99E-02 |
| 86 | GO:0009751: response to salicylic acid | 2.19E-02 |
| 87 | GO:0042542: response to hydrogen peroxide | 2.20E-02 |
| 88 | GO:0006629: lipid metabolic process | 2.22E-02 |
| 89 | GO:0051707: response to other organism | 2.26E-02 |
| 90 | GO:0006508: proteolysis | 2.65E-02 |
| 91 | GO:0015031: protein transport | 2.77E-02 |
| 92 | GO:0009909: regulation of flower development | 3.01E-02 |
| 93 | GO:0009626: plant-type hypersensitive response | 3.30E-02 |
| 94 | GO:0046686: response to cadmium ion | 3.56E-02 |
| 95 | GO:0009058: biosynthetic process | 4.38E-02 |
| 96 | GO:0009845: seed germination | 4.46E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015591: D-ribose transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0015148: D-xylose transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0003855: 3-dehydroquinate dehydratase activity | 0.00E+00 |
| 4 | GO:0005365: myo-inositol transmembrane transporter activity | 0.00E+00 |
| 5 | GO:0015576: sorbitol transmembrane transporter activity | 0.00E+00 |
| 6 | GO:0051670: inulinase activity | 0.00E+00 |
| 7 | GO:0004764: shikimate 3-dehydrogenase (NADP+) activity | 0.00E+00 |
| 8 | GO:0010298: dihydrocamalexic acid decarboxylase activity | 0.00E+00 |
| 9 | GO:0015575: mannitol transmembrane transporter activity | 0.00E+00 |
| 10 | GO:0000386: second spliceosomal transesterification activity | 1.02E-04 |
| 11 | GO:0031219: levanase activity | 1.02E-04 |
| 12 | GO:0015168: glycerol transmembrane transporter activity | 1.02E-04 |
| 13 | GO:0016229: steroid dehydrogenase activity | 1.02E-04 |
| 14 | GO:0010179: IAA-Ala conjugate hydrolase activity | 1.02E-04 |
| 15 | GO:0070401: NADP+ binding | 1.02E-04 |
| 16 | GO:0051669: fructan beta-fructosidase activity | 1.02E-04 |
| 17 | GO:0016301: kinase activity | 1.63E-04 |
| 18 | GO:0004364: glutathione transferase activity | 2.25E-04 |
| 19 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 3.99E-04 |
| 20 | GO:0004049: anthranilate synthase activity | 3.99E-04 |
| 21 | GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity | 3.99E-04 |
| 22 | GO:0010178: IAA-amino acid conjugate hydrolase activity | 5.73E-04 |
| 23 | GO:0005354: galactose transmembrane transporter activity | 5.73E-04 |
| 24 | GO:0005432: calcium:sodium antiporter activity | 5.73E-04 |
| 25 | GO:0008106: alcohol dehydrogenase (NADP+) activity | 5.73E-04 |
| 26 | GO:0009916: alternative oxidase activity | 7.62E-04 |
| 27 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 7.62E-04 |
| 28 | GO:0046923: ER retention sequence binding | 7.62E-04 |
| 29 | GO:0015145: monosaccharide transmembrane transporter activity | 9.62E-04 |
| 30 | GO:0008237: metallopeptidase activity | 1.02E-03 |
| 31 | GO:0051213: dioxygenase activity | 1.14E-03 |
| 32 | GO:0008200: ion channel inhibitor activity | 1.17E-03 |
| 33 | GO:0004806: triglyceride lipase activity | 1.33E-03 |
| 34 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.40E-03 |
| 35 | GO:0008113: peptide-methionine (S)-S-oxide reductase activity | 1.40E-03 |
| 36 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.40E-03 |
| 37 | GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 1.40E-03 |
| 38 | GO:0008320: protein transmembrane transporter activity | 1.65E-03 |
| 39 | GO:0043295: glutathione binding | 1.65E-03 |
| 40 | GO:0008235: metalloexopeptidase activity | 1.65E-03 |
| 41 | GO:0004674: protein serine/threonine kinase activity | 1.80E-03 |
| 42 | GO:0015491: cation:cation antiporter activity | 1.90E-03 |
| 43 | GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity | 1.90E-03 |
| 44 | GO:0004034: aldose 1-epimerase activity | 1.90E-03 |
| 45 | GO:0004033: aldo-keto reductase (NADP) activity | 1.90E-03 |
| 46 | GO:0050661: NADP binding | 2.11E-03 |
| 47 | GO:0004177: aminopeptidase activity | 3.36E-03 |
| 48 | GO:0031072: heat shock protein binding | 4.02E-03 |
| 49 | GO:0030552: cAMP binding | 4.72E-03 |
| 50 | GO:0004867: serine-type endopeptidase inhibitor activity | 4.72E-03 |
| 51 | GO:0030553: cGMP binding | 4.72E-03 |
| 52 | GO:0005216: ion channel activity | 5.85E-03 |
| 53 | GO:0030170: pyridoxal phosphate binding | 6.28E-03 |
| 54 | GO:0016887: ATPase activity | 7.05E-03 |
| 55 | GO:0003727: single-stranded RNA binding | 7.48E-03 |
| 56 | GO:0004499: N,N-dimethylaniline monooxygenase activity | 7.48E-03 |
| 57 | GO:0047134: protein-disulfide reductase activity | 7.91E-03 |
| 58 | GO:0005451: monovalent cation:proton antiporter activity | 8.35E-03 |
| 59 | GO:0005249: voltage-gated potassium channel activity | 8.35E-03 |
| 60 | GO:0030551: cyclic nucleotide binding | 8.35E-03 |
| 61 | GO:0008194: UDP-glycosyltransferase activity | 8.73E-03 |
| 62 | GO:0004791: thioredoxin-disulfide reductase activity | 9.26E-03 |
| 63 | GO:0016853: isomerase activity | 9.26E-03 |
| 64 | GO:0015299: solute:proton antiporter activity | 9.26E-03 |
| 65 | GO:0010181: FMN binding | 9.26E-03 |
| 66 | GO:0005355: glucose transmembrane transporter activity | 9.26E-03 |
| 67 | GO:0004872: receptor activity | 9.73E-03 |
| 68 | GO:0015385: sodium:proton antiporter activity | 1.12E-02 |
| 69 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.12E-02 |
| 70 | GO:0046872: metal ion binding | 1.16E-02 |
| 71 | GO:0016791: phosphatase activity | 1.17E-02 |
| 72 | GO:0008483: transaminase activity | 1.22E-02 |
| 73 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 1.22E-02 |
| 74 | GO:0004721: phosphoprotein phosphatase activity | 1.48E-02 |
| 75 | GO:0004683: calmodulin-dependent protein kinase activity | 1.48E-02 |
| 76 | GO:0030247: polysaccharide binding | 1.48E-02 |
| 77 | GO:0004497: monooxygenase activity | 1.50E-02 |
| 78 | GO:0016787: hydrolase activity | 1.55E-02 |
| 79 | GO:0030145: manganese ion binding | 1.77E-02 |
| 80 | GO:0005509: calcium ion binding | 1.85E-02 |
| 81 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.89E-02 |
| 82 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 1.95E-02 |
| 83 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 1.95E-02 |
| 84 | GO:0005524: ATP binding | 2.43E-02 |
| 85 | GO:0005198: structural molecule activity | 2.46E-02 |
| 86 | GO:0016298: lipase activity | 2.86E-02 |
| 87 | GO:0004672: protein kinase activity | 3.31E-02 |
| 88 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.37E-02 |
| 89 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.37E-02 |
| 90 | GO:0051082: unfolded protein binding | 3.59E-02 |
| 91 | GO:0015035: protein disulfide oxidoreductase activity | 3.67E-02 |
| 92 | GO:0016746: transferase activity, transferring acyl groups | 3.67E-02 |
| 93 | GO:0016758: transferase activity, transferring hexosyl groups | 4.14E-02 |
| 94 | GO:0015144: carbohydrate transmembrane transporter activity | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005950: anthranilate synthase complex | 2.40E-04 |
| 2 | GO:0005886: plasma membrane | 1.12E-03 |
| 3 | GO:0005788: endoplasmic reticulum lumen | 1.20E-03 |
| 4 | GO:0017119: Golgi transport complex | 3.05E-03 |
| 5 | GO:0070469: respiratory chain | 5.85E-03 |
| 6 | GO:0005770: late endosome | 8.80E-03 |
| 7 | GO:0005737: cytoplasm | 1.28E-02 |
| 8 | GO:0005802: trans-Golgi network | 1.52E-02 |
| 9 | GO:0005768: endosome | 1.79E-02 |
| 10 | GO:0005794: Golgi apparatus | 2.83E-02 |
| 11 | GO:0005887: integral component of plasma membrane | 3.02E-02 |
| 12 | GO:0005681: spliceosomal complex | 3.15E-02 |
| 13 | GO:0005783: endoplasmic reticulum | 3.25E-02 |
| 14 | GO:0048046: apoplast | 3.40E-02 |
| 15 | GO:0005789: endoplasmic reticulum membrane | 3.48E-02 |
| 16 | GO:0016021: integral component of membrane | 4.12E-02 |
| 17 | GO:0005623: cell | 4.30E-02 |