co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G24230

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0007638: mechanosensory behavior	0.00E+00
2	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
3	GO:0080127: fruit septum development	0.00E+00
4	GO:0006907: pinocytosis	0.00E+00
5	GO:0070125: mitochondrial translational elongation	0.00E+00
6	GO:0046620: regulation of organ growth	1.95E-05
7	GO:0048497: maintenance of floral organ identity	1.68E-04
8	GO:0016123: xanthophyll biosynthetic process	1.68E-04
9	GO:0016554: cytidine to uridine editing	2.39E-04
10	GO:0009793: embryo development ending in seed dormancy	2.70E-04
11	GO:0006438: valyl-tRNA aminoacylation	4.32E-04
12	GO:0043489: RNA stabilization	4.32E-04
13	GO:0006426: glycyl-tRNA aminoacylation	4.32E-04
14	GO:0043087: regulation of GTPase activity	4.32E-04
15	GO:0015904: tetracycline transport	4.32E-04
16	GO:0009926: auxin polar transport	5.36E-04
17	GO:0009958: positive gravitropism	5.90E-04
18	GO:0048507: meristem development	7.56E-04
19	GO:0009733: response to auxin	8.04E-04
20	GO:0010583: response to cyclopentenone	8.38E-04
21	GO:1900865: chloroplast RNA modification	8.92E-04
22	GO:0001736: establishment of planar polarity	9.33E-04
23	GO:0080009: mRNA methylation	9.33E-04
24	GO:0009786: regulation of asymmetric cell division	9.33E-04
25	GO:2000123: positive regulation of stomatal complex development	9.33E-04
26	GO:0043039: tRNA aminoacylation	9.33E-04
27	GO:0048255: mRNA stabilization	9.33E-04
28	GO:0048829: root cap development	1.04E-03
29	GO:0045910: negative regulation of DNA recombination	1.52E-03
30	GO:0009658: chloroplast organization	1.56E-03
31	GO:0010311: lateral root formation	1.83E-03
32	GO:0006351: transcription, DNA-templated	1.84E-03
33	GO:0031048: chromatin silencing by small RNA	2.19E-03
34	GO:0006424: glutamyl-tRNA aminoacylation	2.19E-03
35	GO:2000904: regulation of starch metabolic process	2.19E-03
36	GO:0010371: regulation of gibberellin biosynthetic process	2.19E-03
37	GO:0007231: osmosensory signaling pathway	2.19E-03
38	GO:0051639: actin filament network formation	2.19E-03
39	GO:0010239: chloroplast mRNA processing	2.19E-03
40	GO:0044211: CTP salvage	2.19E-03
41	GO:0007276: gamete generation	2.19E-03
42	GO:0019048: modulation by virus of host morphology or physiology	2.19E-03
43	GO:0009734: auxin-activated signaling pathway	2.40E-03
44	GO:0051017: actin filament bundle assembly	2.42E-03
45	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.42E-03
46	GO:0051567: histone H3-K9 methylation	2.95E-03
47	GO:0033500: carbohydrate homeostasis	2.95E-03
48	GO:0044206: UMP salvage	2.95E-03
49	GO:2000038: regulation of stomatal complex development	2.95E-03
50	GO:0042991: transcription factor import into nucleus	2.95E-03
51	GO:0051764: actin crosslink formation	2.95E-03
52	GO:0009765: photosynthesis, light harvesting	2.95E-03
53	GO:0009451: RNA modification	3.45E-03
54	GO:0080110: sporopollenin biosynthetic process	3.78E-03
55	GO:0016120: carotene biosynthetic process	3.78E-03
56	GO:0045487: gibberellin catabolic process	3.78E-03
57	GO:0010375: stomatal complex patterning	3.78E-03
58	GO:0042127: regulation of cell proliferation	3.82E-03
59	GO:0016117: carotenoid biosynthetic process	4.14E-03
60	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	4.68E-03
61	GO:0009913: epidermal cell differentiation	4.68E-03
62	GO:0006206: pyrimidine nucleobase metabolic process	4.68E-03
63	GO:1902456: regulation of stomatal opening	4.68E-03
64	GO:0018258: protein O-linked glycosylation via hydroxyproline	4.68E-03
65	GO:0033365: protein localization to organelle	4.68E-03
66	GO:0003006: developmental process involved in reproduction	4.68E-03
67	GO:0016458: gene silencing	4.68E-03
68	GO:0010405: arabinogalactan protein metabolic process	4.68E-03
69	GO:0009736: cytokinin-activated signaling pathway	4.70E-03
70	GO:0010305: leaf vascular tissue pattern formation	4.83E-03
71	GO:0007018: microtubule-based movement	5.19E-03
72	GO:0048825: cotyledon development	5.57E-03
73	GO:0009082: branched-chain amino acid biosynthetic process	5.64E-03
74	GO:0009099: valine biosynthetic process	5.64E-03
75	GO:0030488: tRNA methylation	5.64E-03
76	GO:0071554: cell wall organization or biogenesis	5.97E-03
77	GO:0048316: seed development	6.06E-03
78	GO:0010098: suspensor development	6.67E-03
79	GO:0000082: G1/S transition of mitotic cell cycle	6.67E-03
80	GO:0010444: guard mother cell differentiation	6.67E-03
81	GO:0045995: regulation of embryonic development	6.67E-03
82	GO:1900056: negative regulation of leaf senescence	6.67E-03
83	GO:0009828: plant-type cell wall loosening	7.24E-03
84	GO:0001522: pseudouridine synthesis	7.76E-03
85	GO:0010492: maintenance of shoot apical meristem identity	7.76E-03
86	GO:0000105: histidine biosynthetic process	7.76E-03
87	GO:0051607: defense response to virus	8.17E-03
88	GO:0009097: isoleucine biosynthetic process	8.91E-03
89	GO:0071482: cellular response to light stimulus	8.91E-03
90	GO:0046916: cellular transition metal ion homeostasis	1.01E-02
91	GO:0000373: Group II intron splicing	1.01E-02
92	GO:0006779: porphyrin-containing compound biosynthetic process	1.14E-02
93	GO:0009098: leucine biosynthetic process	1.14E-02
94	GO:0006468: protein phosphorylation	1.16E-02
95	GO:0000160: phosphorelay signal transduction system	1.19E-02
96	GO:0009790: embryo development	1.20E-02
97	GO:0045892: negative regulation of transcription, DNA-templated	1.21E-02
98	GO:0006782: protoporphyrinogen IX biosynthetic process	1.27E-02
99	GO:0006535: cysteine biosynthetic process from serine	1.27E-02
100	GO:0030422: production of siRNA involved in RNA interference	1.27E-02
101	GO:0009641: shade avoidance	1.27E-02
102	GO:0006298: mismatch repair	1.27E-02
103	GO:0006949: syncytium formation	1.27E-02
104	GO:0010192: mucilage biosynthetic process	1.27E-02
105	GO:0006865: amino acid transport	1.37E-02
106	GO:0040008: regulation of growth	1.40E-02
107	GO:0048765: root hair cell differentiation	1.41E-02
108	GO:0006816: calcium ion transport	1.41E-02
109	GO:0071555: cell wall organization	1.50E-02
110	GO:0005983: starch catabolic process	1.55E-02
111	GO:0045037: protein import into chloroplast stroma	1.55E-02
112	GO:0010582: floral meristem determinacy	1.55E-02
113	GO:0030001: metal ion transport	1.64E-02
114	GO:0010102: lateral root morphogenesis	1.70E-02
115	GO:0030048: actin filament-based movement	1.70E-02
116	GO:0009691: cytokinin biosynthetic process	1.70E-02
117	GO:0010588: cotyledon vascular tissue pattern formation	1.70E-02
118	GO:0048364: root development	1.73E-02
119	GO:0007166: cell surface receptor signaling pathway	1.76E-02
120	GO:0010020: chloroplast fission	1.85E-02
121	GO:0009887: animal organ morphogenesis	1.85E-02
122	GO:0048467: gynoecium development	1.85E-02
123	GO:0042546: cell wall biogenesis	1.94E-02
124	GO:0070588: calcium ion transmembrane transport	2.01E-02
125	GO:0006863: purine nucleobase transport	2.17E-02
126	GO:0009833: plant-type primary cell wall biogenesis	2.17E-02
127	GO:0000162: tryptophan biosynthetic process	2.17E-02
128	GO:0007010: cytoskeleton organization	2.33E-02
129	GO:0019344: cysteine biosynthetic process	2.33E-02
130	GO:0009664: plant-type cell wall organization	2.34E-02
131	GO:0019953: sexual reproduction	2.50E-02
132	GO:0006418: tRNA aminoacylation for protein translation	2.50E-02
133	GO:0003333: amino acid transmembrane transport	2.68E-02
134	GO:0010431: seed maturation	2.68E-02
135	GO:0006306: DNA methylation	2.68E-02
136	GO:0007005: mitochondrion organization	2.85E-02
137	GO:0009686: gibberellin biosynthetic process	3.04E-02
138	GO:0010082: regulation of root meristem growth	3.04E-02
139	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	3.04E-02
140	GO:0006284: base-excision repair	3.22E-02
141	GO:0010091: trichome branching	3.22E-02
142	GO:0010584: pollen exine formation	3.22E-02
143	GO:0006355: regulation of transcription, DNA-templated	3.52E-02
144	GO:0080022: primary root development	3.61E-02
145	GO:0008033: tRNA processing	3.61E-02
146	GO:0010087: phloem or xylem histogenesis	3.61E-02
147	GO:0010118: stomatal movement	3.61E-02
148	GO:0010182: sugar mediated signaling pathway	3.81E-02
149	GO:0006342: chromatin silencing	3.81E-02
150	GO:0009741: response to brassinosteroid	3.81E-02
151	GO:0016032: viral process	4.63E-02
152	GO:0032502: developmental process	4.63E-02
153	GO:0009058: biosynthetic process	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
2	GO:0071633: dihydroceramidase activity	0.00E+00
3	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
4	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
5	GO:0015267: channel activity	0.00E+00
6	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
7	GO:0001872: (1->3)-beta-D-glucan binding	6.19E-05
8	GO:0004176: ATP-dependent peptidase activity	3.07E-04
9	GO:0004519: endonuclease activity	3.78E-04
10	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	4.32E-04
11	GO:0004818: glutamate-tRNA ligase activity	4.32E-04
12	GO:0052381: tRNA dimethylallyltransferase activity	4.32E-04
13	GO:0004160: dihydroxy-acid dehydratase activity	4.32E-04
14	GO:0004832: valine-tRNA ligase activity	4.32E-04
15	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	4.32E-04
16	GO:0004820: glycine-tRNA ligase activity	4.32E-04
17	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	4.32E-04
18	GO:0005227: calcium activated cation channel activity	4.32E-04
19	GO:0003723: RNA binding	5.23E-04
20	GO:0051015: actin filament binding	9.08E-04
21	GO:0008493: tetracycline transporter activity	9.33E-04
22	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	9.33E-04
23	GO:0050736: O-malonyltransferase activity	9.33E-04
24	GO:0019156: isoamylase activity	9.33E-04
25	GO:0050017: L-3-cyanoalanine synthase activity	9.33E-04
26	GO:0003852: 2-isopropylmalate synthase activity	9.33E-04
27	GO:0045543: gibberellin 2-beta-dioxygenase activity	9.33E-04
28	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	9.33E-04
29	GO:0008805: carbon-monoxide oxygenase activity	9.33E-04
30	GO:0008237: metallopeptidase activity	1.06E-03
31	GO:0016805: dipeptidase activity	1.52E-03
32	GO:0004180: carboxypeptidase activity	1.52E-03
33	GO:0035197: siRNA binding	2.19E-03
34	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	2.19E-03
35	GO:0016301: kinase activity	2.28E-03
36	GO:0016887: ATPase activity	2.90E-03
37	GO:0019199: transmembrane receptor protein kinase activity	2.95E-03
38	GO:0004845: uracil phosphoribosyltransferase activity	2.95E-03
39	GO:0010011: auxin binding	2.95E-03
40	GO:0016836: hydro-lyase activity	2.95E-03
41	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	2.95E-03
42	GO:0010328: auxin influx transmembrane transporter activity	2.95E-03
43	GO:0008725: DNA-3-methyladenine glycosylase activity	3.78E-03
44	GO:0004556: alpha-amylase activity	4.68E-03
45	GO:0030983: mismatched DNA binding	4.68E-03
46	GO:1990714: hydroxyproline O-galactosyltransferase activity	4.68E-03
47	GO:0004709: MAP kinase kinase kinase activity	4.68E-03
48	GO:0005524: ATP binding	4.86E-03
49	GO:0003777: microtubule motor activity	5.35E-03
50	GO:0016832: aldehyde-lyase activity	5.64E-03
51	GO:0004849: uridine kinase activity	5.64E-03
52	GO:0004124: cysteine synthase activity	5.64E-03
53	GO:0004650: polygalacturonase activity	6.57E-03
54	GO:0000156: phosphorelay response regulator activity	6.80E-03
55	GO:0003779: actin binding	7.10E-03
56	GO:0016413: O-acetyltransferase activity	8.17E-03
57	GO:0046914: transition metal ion binding	8.91E-03
58	GO:0030247: polysaccharide binding	1.02E-02
59	GO:0005096: GTPase activator activity	1.19E-02
60	GO:0004222: metalloendopeptidase activity	1.25E-02
61	GO:0042803: protein homodimerization activity	1.27E-02
62	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.36E-02
63	GO:0003697: single-stranded DNA binding	1.44E-02
64	GO:0004674: protein serine/threonine kinase activity	1.53E-02
65	GO:0000049: tRNA binding	1.55E-02
66	GO:0004521: endoribonuclease activity	1.55E-02
67	GO:0008017: microtubule binding	1.57E-02
68	GO:0015266: protein channel activity	1.70E-02
69	GO:0005262: calcium channel activity	1.70E-02
70	GO:0009982: pseudouridine synthase activity	1.70E-02
71	GO:0009055: electron carrier activity	1.80E-02
72	GO:0008266: poly(U) RNA binding	1.85E-02
73	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.85E-02
74	GO:0003774: motor activity	1.85E-02
75	GO:0035091: phosphatidylinositol binding	2.01E-02
76	GO:0003712: transcription cofactor activity	2.01E-02
77	GO:0043621: protein self-association	2.01E-02
78	GO:0051536: iron-sulfur cluster binding	2.33E-02
79	GO:0005345: purine nucleobase transmembrane transporter activity	2.50E-02
80	GO:0008289: lipid binding	2.65E-02
81	GO:0004707: MAP kinase activity	2.68E-02
82	GO:0015171: amino acid transmembrane transporter activity	2.78E-02
83	GO:0016760: cellulose synthase (UDP-forming) activity	3.04E-02
84	GO:0004672: protein kinase activity	3.10E-02
85	GO:0003727: single-stranded RNA binding	3.22E-02
86	GO:0004812: aminoacyl-tRNA ligase activity	3.41E-02
87	GO:0043565: sequence-specific DNA binding	3.57E-02
88	GO:0015035: protein disulfide oxidoreductase activity	3.68E-02
89	GO:0052689: carboxylic ester hydrolase activity	3.81E-02
90	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	3.81E-02
91	GO:0010181: FMN binding	4.01E-02
92	GO:0050662: coenzyme binding	4.01E-02
93	GO:0019901: protein kinase binding	4.21E-02
94	GO:0016762: xyloglucan:xyloglucosyl transferase activity	4.42E-02
95	GO:0004871: signal transducer activity	4.45E-02
96	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.58E-02
97	GO:0004518: nuclease activity	4.63E-02
98	GO:0005515: protein binding	4.79E-02
99	GO:0016829: lyase activity	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0000408: EKC/KEOPS complex	0.00E+00
2	GO:0009537: proplastid	0.00E+00
3	GO:0009507: chloroplast	1.53E-04
4	GO:0009986: cell surface	4.14E-04
5	GO:0005886: plasma membrane	9.26E-04
6	GO:0009569: chloroplast starch grain	9.33E-04
7	GO:0009513: etioplast	9.33E-04
8	GO:0031357: integral component of chloroplast inner membrane	9.33E-04
9	GO:0005884: actin filament	1.19E-03
10	GO:0009509: chromoplast	1.52E-03
11	GO:0030139: endocytic vesicle	1.52E-03
12	GO:0005719: nuclear euchromatin	2.19E-03
13	GO:0032585: multivesicular body membrane	2.19E-03
14	GO:0032432: actin filament bundle	2.19E-03
15	GO:0009941: chloroplast envelope	2.59E-03
16	GO:0015629: actin cytoskeleton	3.51E-03
17	GO:0005871: kinesin complex	4.14E-03
18	GO:0046658: anchored component of plasma membrane	5.11E-03
19	GO:0009501: amyloplast	7.76E-03
20	GO:0005874: microtubule	8.55E-03
21	GO:0030529: intracellular ribonucleoprotein complex	8.65E-03
22	GO:0009707: chloroplast outer membrane	1.13E-02
23	GO:0015030: Cajal body	1.14E-02
24	GO:0000418: DNA-directed RNA polymerase IV complex	1.27E-02
25	GO:0016459: myosin complex	1.27E-02
26	GO:0009574: preprophase band	1.70E-02
27	GO:0030095: chloroplast photosystem II	1.85E-02
28	GO:0005856: cytoskeleton	2.09E-02
29	GO:0005875: microtubule associated complex	2.17E-02
30	GO:0009536: plastid	2.22E-02
31	GO:0009654: photosystem II oxygen evolving complex	2.50E-02
32	GO:0031225: anchored component of membrane	2.63E-02
33	GO:0009570: chloroplast stroma	3.16E-02
34	GO:0005744: mitochondrial inner membrane presequence translocase complex	3.22E-02
35	GO:0009706: chloroplast inner membrane	3.57E-02
36	GO:0009504: cell plate	4.21E-02
37	GO:0031965: nuclear membrane	4.21E-02
38	GO:0019898: extrinsic component of membrane	4.21E-02
39	GO:0005743: mitochondrial inner membrane	4.96E-02