co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G22740

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090355: positive regulation of auxin metabolic process	0.00E+00
2	GO:0090358: positive regulation of tryptophan metabolic process	0.00E+00
3	GO:0090615: mitochondrial mRNA processing	0.00E+00
4	GO:0048255: mRNA stabilization	1.52E-04
5	GO:0080175: phragmoplast microtubule organization	1.52E-04
6	GO:1902290: positive regulation of defense response to oomycetes	3.73E-04
7	GO:1902476: chloride transmembrane transport	3.73E-04
8	GO:0016558: protein import into peroxisome matrix	6.32E-04
9	GO:0051225: spindle assembly	6.32E-04
10	GO:0009616: virus induced gene silencing	6.32E-04
11	GO:0009959: negative gravitropism	7.73E-04
12	GO:0035194: posttranscriptional gene silencing by RNA	7.73E-04
13	GO:0010315: auxin efflux	7.73E-04
14	GO:0006821: chloride transport	1.07E-03
15	GO:0015937: coenzyme A biosynthetic process	1.07E-03
16	GO:0010044: response to aluminum ion	1.07E-03
17	GO:0006401: RNA catabolic process	1.07E-03
18	GO:0006754: ATP biosynthetic process	1.58E-03
19	GO:1900426: positive regulation of defense response to bacterium	1.77E-03
20	GO:0000162: tryptophan biosynthetic process	3.26E-03
21	GO:0007010: cytoskeleton organization	3.49E-03
22	GO:0009451: RNA modification	4.16E-03
23	GO:0019748: secondary metabolic process	4.24E-03
24	GO:0009693: ethylene biosynthetic process	4.50E-03
25	GO:0010051: xylem and phloem pattern formation	5.31E-03
26	GO:0008360: regulation of cell shape	5.59E-03
27	GO:0009851: auxin biosynthetic process	6.17E-03
28	GO:0009658: chloroplast organization	6.27E-03
29	GO:0006635: fatty acid beta-oxidation	6.46E-03
30	GO:0080156: mitochondrial mRNA modification	6.46E-03
31	GO:0002229: defense response to oomycetes	6.46E-03
32	GO:0009639: response to red or far red light	7.38E-03
33	GO:0008219: cell death	1.01E-02
34	GO:0009832: plant-type cell wall biogenesis	1.04E-02
35	GO:0009834: plant-type secondary cell wall biogenesis	1.08E-02
36	GO:0009853: photorespiration	1.19E-02
37	GO:0008152: metabolic process	1.27E-02
38	GO:0006897: endocytosis	1.34E-02
39	GO:0009926: auxin polar transport	1.42E-02
40	GO:0051707: response to other organism	1.42E-02
41	GO:0031347: regulation of defense response	1.63E-02
42	GO:0006364: rRNA processing	1.75E-02
43	GO:0010224: response to UV-B	1.80E-02
44	GO:0048316: seed development	2.02E-02
45	GO:0018105: peptidyl-serine phosphorylation	2.30E-02
46	GO:0009793: embryo development ending in seed dormancy	2.57E-02
47	GO:0055085: transmembrane transport	2.60E-02
48	GO:0040008: regulation of growth	3.22E-02
49	GO:0010150: leaf senescence	3.33E-02
50	GO:0010228: vegetative to reproductive phase transition of meristem	3.44E-02
51	GO:0009617: response to bacterium	3.77E-02
52	GO:0071555: cell wall organization	4.13E-02
53	GO:0009826: unidimensional cell growth	4.42E-02

Rank	GO Term	Adjusted P value
1	GO:0008859: exoribonuclease II activity	0.00E+00
2	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	6.26E-05
3	GO:0015075: ion transmembrane transporter activity	6.26E-05
4	GO:0017091: AU-rich element binding	6.26E-05
5	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	6.26E-05
6	GO:0004632: phosphopantothenate--cysteine ligase activity	6.26E-05
7	GO:0015929: hexosaminidase activity	1.52E-04
8	GO:0004563: beta-N-acetylhexosaminidase activity	1.52E-04
9	GO:0005253: anion channel activity	4.99E-04
10	GO:0005247: voltage-gated chloride channel activity	7.73E-04
11	GO:0019899: enzyme binding	1.07E-03
12	GO:0003724: RNA helicase activity	1.41E-03
13	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	1.58E-03
14	GO:0004519: endonuclease activity	1.96E-03
15	GO:0015020: glucuronosyltransferase activity	1.96E-03
16	GO:0004713: protein tyrosine kinase activity	1.96E-03
17	GO:0008327: methyl-CpG binding	2.17E-03
18	GO:0008559: xenobiotic-transporting ATPase activity	2.17E-03
19	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.17E-03
20	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.17E-03
21	GO:0022857: transmembrane transporter activity	2.24E-03
22	GO:0000175: 3'-5'-exoribonuclease activity	2.58E-03
23	GO:0003723: RNA binding	3.86E-03
24	GO:0035251: UDP-glucosyltransferase activity	3.98E-03
25	GO:0004540: ribonuclease activity	3.98E-03
26	GO:0008194: UDP-glycosyltransferase activity	4.54E-03
27	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.11E-02
28	GO:0004185: serine-type carboxypeptidase activity	1.42E-02
29	GO:0043621: protein self-association	1.50E-02
30	GO:0016887: ATPase activity	1.79E-02
31	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.02E-02
32	GO:0016758: transferase activity, transferring hexosyl groups	2.60E-02
33	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.70E-02
34	GO:0030246: carbohydrate binding	2.75E-02
35	GO:0008017: microtubule binding	3.44E-02
36	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.95E-02
37	GO:0008168: methyltransferase activity	4.42E-02
38	GO:0016788: hydrolase activity, acting on ester bonds	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0010370: perinucleolar chromocenter	6.26E-05
2	GO:0070652: HAUS complex	2.57E-04
3	GO:0000178: exosome (RNase complex)	6.32E-04
4	GO:0034707: chloride channel complex	7.73E-04
5	GO:0010005: cortical microtubule, transverse to long axis	9.20E-04
6	GO:0005819: spindle	1.07E-03
7	GO:0005720: nuclear heterochromatin	1.58E-03
8	GO:0043231: intracellular membrane-bounded organelle	1.99E-03
9	GO:0009524: phragmoplast	3.11E-03
10	GO:0045271: respiratory chain complex I	3.74E-03
11	GO:0000932: P-body	8.35E-03
12	GO:0000325: plant-type vacuole	1.11E-02
13	GO:0009505: plant-type cell wall	1.18E-02
14	GO:0031966: mitochondrial membrane	1.67E-02
15	GO:0005747: mitochondrial respiratory chain complex I	2.02E-02
16	GO:0016021: integral component of membrane	2.74E-02
17	GO:0009705: plant-type vacuole membrane	3.33E-02
18	GO:0005774: vacuolar membrane	4.23E-02