Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G22240

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071277: cellular response to calcium ion6.42E-05
2GO:0009773: photosynthetic electron transport in photosystem I7.90E-05
3GO:0080029: cellular response to boron-containing substance levels1.55E-04
4GO:0006081: cellular aldehyde metabolic process2.63E-04
5GO:0046713: borate transport3.82E-04
6GO:0071484: cellular response to light intensity3.82E-04
7GO:0042823: pyridoxal phosphate biosynthetic process3.82E-04
8GO:0010117: photoprotection6.45E-04
9GO:0009972: cytidine deamination7.90E-04
10GO:0010189: vitamin E biosynthetic process9.40E-04
11GO:0008272: sulfate transport1.10E-03
12GO:1900057: positive regulation of leaf senescence1.10E-03
13GO:0019827: stem cell population maintenance1.26E-03
14GO:0070413: trehalose metabolism in response to stress1.26E-03
15GO:0009704: de-etiolation1.26E-03
16GO:0015979: photosynthesis1.33E-03
17GO:0071482: cellular response to light stimulus1.44E-03
18GO:0009051: pentose-phosphate shunt, oxidative branch1.62E-03
19GO:0090333: regulation of stomatal closure1.62E-03
20GO:0010205: photoinhibition1.81E-03
21GO:0006857: oligopeptide transport1.85E-03
22GO:0006535: cysteine biosynthetic process from serine2.01E-03
23GO:0006096: glycolytic process2.04E-03
24GO:0000038: very long-chain fatty acid metabolic process2.21E-03
25GO:0009698: phenylpropanoid metabolic process2.21E-03
26GO:0018107: peptidyl-threonine phosphorylation2.64E-03
27GO:0006094: gluconeogenesis2.64E-03
28GO:0006006: glucose metabolic process2.64E-03
29GO:0010143: cutin biosynthetic process2.87E-03
30GO:0019253: reductive pentose-phosphate cycle2.87E-03
31GO:0010025: wax biosynthetic process3.33E-03
32GO:0006636: unsaturated fatty acid biosynthetic process3.33E-03
33GO:0005992: trehalose biosynthetic process3.57E-03
34GO:0019344: cysteine biosynthetic process3.57E-03
35GO:0006633: fatty acid biosynthetic process3.82E-03
36GO:0007017: microtubule-based process3.82E-03
37GO:0016998: cell wall macromolecule catabolic process4.08E-03
38GO:0031408: oxylipin biosynthetic process4.08E-03
39GO:0019748: secondary metabolic process4.34E-03
40GO:0035428: hexose transmembrane transport4.34E-03
41GO:0016117: carotenoid biosynthetic process5.15E-03
42GO:0010118: stomatal movement5.43E-03
43GO:0042335: cuticle development5.43E-03
44GO:0048868: pollen tube development5.72E-03
45GO:0046323: glucose import5.72E-03
46GO:0019252: starch biosynthetic process6.31E-03
47GO:0080167: response to karrikin8.04E-03
48GO:0009788: negative regulation of abscisic acid-activated signaling pathway8.88E-03
49GO:0055114: oxidation-reduction process8.95E-03
50GO:0042128: nitrate assimilation9.22E-03
51GO:0015995: chlorophyll biosynthetic process9.57E-03
52GO:0010411: xyloglucan metabolic process9.57E-03
53GO:0045454: cell redox homeostasis9.62E-03
54GO:0006869: lipid transport1.06E-02
55GO:0000160: phosphorelay signal transduction system1.07E-02
56GO:0010311: lateral root formation1.07E-02
57GO:0032259: methylation1.14E-02
58GO:0006631: fatty acid metabolic process1.37E-02
59GO:0051707: response to other organism1.45E-02
60GO:0042546: cell wall biogenesis1.50E-02
61GO:0009644: response to high light intensity1.54E-02
62GO:0006813: potassium ion transport1.80E-02
63GO:0009736: cytokinin-activated signaling pathway1.80E-02
64GO:0043086: negative regulation of catalytic activity2.02E-02
65GO:0042545: cell wall modification2.26E-02
66GO:0018105: peptidyl-serine phosphorylation2.36E-02
67GO:0055085: transmembrane transport2.68E-02
68GO:0045490: pectin catabolic process3.41E-02
69GO:0006970: response to osmotic stress4.90E-02
RankGO TermAdjusted P value
1GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
2GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
3GO:0030794: (S)-coclaurine-N-methyltransferase activity0.00E+00
4GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
5GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors0.00E+00
6GO:0033840: NDP-glucose-starch glucosyltransferase activity0.00E+00
7GO:0045550: geranylgeranyl reductase activity0.00E+00
8GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
9GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity5.55E-05
10GO:0035671: enone reductase activity6.42E-05
11GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity6.42E-05
12GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity6.42E-05
13GO:0031957: very long-chain fatty acid-CoA ligase activity6.42E-05
14GO:0015168: glycerol transmembrane transporter activity6.42E-05
15GO:0050017: L-3-cyanoalanine synthase activity1.55E-04
16GO:0008509: anion transmembrane transporter activity1.55E-04
17GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity1.55E-04
18GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity1.55E-04
19GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity2.63E-04
20GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor2.63E-04
21GO:0004373: glycogen (starch) synthase activity2.63E-04
22GO:0046715: borate transmembrane transporter activity3.82E-04
23GO:0017057: 6-phosphogluconolactonase activity3.82E-04
24GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor3.82E-04
25GO:0015204: urea transmembrane transporter activity5.10E-04
26GO:0009011: starch synthase activity5.10E-04
27GO:0009922: fatty acid elongase activity6.45E-04
28GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen6.45E-04
29GO:0004332: fructose-bisphosphate aldolase activity7.90E-04
30GO:0004029: aldehyde dehydrogenase (NAD) activity7.90E-04
31GO:0004124: cysteine synthase activity9.40E-04
32GO:0004126: cytidine deaminase activity9.40E-04
33GO:0102391: decanoate--CoA ligase activity9.40E-04
34GO:0004467: long-chain fatty acid-CoA ligase activity1.10E-03
35GO:0015140: malate transmembrane transporter activity1.10E-03
36GO:0005337: nucleoside transmembrane transporter activity1.26E-03
37GO:0004185: serine-type carboxypeptidase activity1.30E-03
38GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water1.44E-03
39GO:0004565: beta-galactosidase activity2.64E-03
40GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity3.33E-03
41GO:0102336: 3-oxo-arachidoyl-CoA synthase activity3.33E-03
42GO:0102337: 3-oxo-cerotoyl-CoA synthase activity3.33E-03
43GO:0003954: NADH dehydrogenase activity3.57E-03
44GO:0015144: carbohydrate transmembrane transporter activity3.65E-03
45GO:0008324: cation transmembrane transporter activity3.82E-03
46GO:0005351: sugar:proton symporter activity4.10E-03
47GO:0022891: substrate-specific transmembrane transporter activity4.60E-03
48GO:0042802: identical protein binding5.33E-03
49GO:0005355: glucose transmembrane transporter activity6.01E-03
50GO:0008168: methyltransferase activity6.24E-03
51GO:0016762: xyloglucan:xyloglucosyl transferase activity6.61E-03
52GO:0000156: phosphorelay response regulator activity7.24E-03
53GO:0016791: phosphatase activity7.55E-03
54GO:0005200: structural constituent of cytoskeleton7.88E-03
55GO:0015250: water channel activity8.54E-03
56GO:0016798: hydrolase activity, acting on glycosyl bonds9.57E-03
57GO:0009055: electron carrier activity1.27E-02
58GO:0050661: NADP binding1.33E-02
59GO:0015293: symporter activity1.58E-02
60GO:0051287: NAD binding1.66E-02
61GO:0008289: lipid binding1.66E-02
62GO:0045330: aspartyl esterase activity1.93E-02
63GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups2.07E-02
64GO:0030599: pectinesterase activity2.21E-02
65GO:0015035: protein disulfide oxidoreductase activity2.36E-02
66GO:0030170: pyridoxal phosphate binding2.92E-02
67GO:0046910: pectinesterase inhibitor activity3.24E-02
68GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.04E-02
69GO:0005215: transporter activity4.71E-02
70GO:0016788: hydrolase activity, acting on ester bonds4.71E-02
RankGO TermAdjusted P value
1GO:0009579: thylakoid1.33E-05
2GO:0009534: chloroplast thylakoid1.36E-05
3GO:0031304: intrinsic component of mitochondrial inner membrane1.55E-04
4GO:0009569: chloroplast starch grain1.55E-04
5GO:0009507: chloroplast1.90E-04
6GO:0009535: chloroplast thylakoid membrane3.46E-04
7GO:0045298: tubulin complex1.62E-03
8GO:0008180: COP9 signalosome1.62E-03
9GO:0048046: apoplast3.57E-03
10GO:0009654: photosystem II oxygen evolving complex3.82E-03
11GO:0005618: cell wall4.15E-03
12GO:0016020: membrane5.56E-03
13GO:0009941: chloroplast envelope5.59E-03
14GO:0019898: extrinsic component of membrane6.31E-03
15GO:0010319: stromule7.88E-03
16GO:0031969: chloroplast membrane8.04E-03
17GO:0019005: SCF ubiquitin ligase complex1.03E-02
18GO:0031977: thylakoid lumen1.37E-02
19GO:0000502: proteasome complex1.80E-02
20GO:0012505: endomembrane system2.26E-02
21GO:0005773: vacuole2.35E-02
22GO:0010287: plastoglobule2.61E-02
23GO:0009543: chloroplast thylakoid lumen2.71E-02
24GO:0005886: plasma membrane3.23E-02
25GO:0031225: anchored component of membrane3.30E-02
26GO:0009705: plant-type vacuole membrane3.41E-02
27GO:0005774: vacuolar membrane4.40E-02
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Gene type



Gene DE type