GO Enrichment Analysis of Co-expressed Genes with
AT2G22230
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 2 | GO:0017038: protein import | 0.00E+00 |
| 3 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 4 | GO:0009069: serine family amino acid metabolic process | 0.00E+00 |
| 5 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 6 | GO:0070178: D-serine metabolic process | 0.00E+00 |
| 7 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 8 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 9 | GO:0042407: cristae formation | 0.00E+00 |
| 10 | GO:0015995: chlorophyll biosynthetic process | 2.80E-07 |
| 11 | GO:0018026: peptidyl-lysine monomethylation | 1.02E-06 |
| 12 | GO:0009658: chloroplast organization | 6.40E-06 |
| 13 | GO:0005983: starch catabolic process | 8.04E-06 |
| 14 | GO:0042793: transcription from plastid promoter | 4.09E-05 |
| 15 | GO:0019252: starch biosynthetic process | 8.23E-05 |
| 16 | GO:0032544: plastid translation | 1.25E-04 |
| 17 | GO:0010480: microsporocyte differentiation | 1.44E-04 |
| 18 | GO:0000025: maltose catabolic process | 1.44E-04 |
| 19 | GO:0005980: glycogen catabolic process | 1.44E-04 |
| 20 | GO:0030198: extracellular matrix organization | 1.44E-04 |
| 21 | GO:0006423: cysteinyl-tRNA aminoacylation | 3.29E-04 |
| 22 | GO:0019388: galactose catabolic process | 3.29E-04 |
| 23 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.29E-04 |
| 24 | GO:0006006: glucose metabolic process | 3.34E-04 |
| 25 | GO:0006696: ergosterol biosynthetic process | 5.40E-04 |
| 26 | GO:2001295: malonyl-CoA biosynthetic process | 5.40E-04 |
| 27 | GO:0006228: UTP biosynthetic process | 7.73E-04 |
| 28 | GO:0010731: protein glutathionylation | 7.73E-04 |
| 29 | GO:0046739: transport of virus in multicellular host | 7.73E-04 |
| 30 | GO:0009590: detection of gravity | 7.73E-04 |
| 31 | GO:0006986: response to unfolded protein | 7.73E-04 |
| 32 | GO:0009102: biotin biosynthetic process | 7.73E-04 |
| 33 | GO:0051085: chaperone mediated protein folding requiring cofactor | 7.73E-04 |
| 34 | GO:0006241: CTP biosynthetic process | 7.73E-04 |
| 35 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 7.73E-04 |
| 36 | GO:0006165: nucleoside diphosphate phosphorylation | 7.73E-04 |
| 37 | GO:0015979: photosynthesis | 9.73E-04 |
| 38 | GO:0010109: regulation of photosynthesis | 1.02E-03 |
| 39 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.02E-03 |
| 40 | GO:0006183: GTP biosynthetic process | 1.02E-03 |
| 41 | GO:0022622: root system development | 1.02E-03 |
| 42 | GO:0016120: carotene biosynthetic process | 1.29E-03 |
| 43 | GO:0000304: response to singlet oxygen | 1.29E-03 |
| 44 | GO:0009107: lipoate biosynthetic process | 1.29E-03 |
| 45 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.59E-03 |
| 46 | GO:0010190: cytochrome b6f complex assembly | 1.59E-03 |
| 47 | GO:0033365: protein localization to organelle | 1.59E-03 |
| 48 | GO:0006014: D-ribose metabolic process | 1.59E-03 |
| 49 | GO:0006563: L-serine metabolic process | 1.59E-03 |
| 50 | GO:0010405: arabinogalactan protein metabolic process | 1.59E-03 |
| 51 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.59E-03 |
| 52 | GO:0009959: negative gravitropism | 1.59E-03 |
| 53 | GO:0006633: fatty acid biosynthetic process | 1.73E-03 |
| 54 | GO:0010027: thylakoid membrane organization | 1.78E-03 |
| 55 | GO:0006458: 'de novo' protein folding | 1.91E-03 |
| 56 | GO:0042026: protein refolding | 1.91E-03 |
| 57 | GO:0032880: regulation of protein localization | 2.24E-03 |
| 58 | GO:0010161: red light signaling pathway | 2.24E-03 |
| 59 | GO:0048437: floral organ development | 2.24E-03 |
| 60 | GO:0009813: flavonoid biosynthetic process | 2.43E-03 |
| 61 | GO:0006605: protein targeting | 2.60E-03 |
| 62 | GO:0009231: riboflavin biosynthetic process | 2.60E-03 |
| 63 | GO:0005978: glycogen biosynthetic process | 2.60E-03 |
| 64 | GO:0010100: negative regulation of photomorphogenesis | 2.96E-03 |
| 65 | GO:0006526: arginine biosynthetic process | 2.96E-03 |
| 66 | GO:0010099: regulation of photomorphogenesis | 2.96E-03 |
| 67 | GO:0010497: plasmodesmata-mediated intercellular transport | 2.96E-03 |
| 68 | GO:0046916: cellular transition metal ion homeostasis | 3.35E-03 |
| 69 | GO:0006783: heme biosynthetic process | 3.35E-03 |
| 70 | GO:0006631: fatty acid metabolic process | 3.46E-03 |
| 71 | GO:0042254: ribosome biogenesis | 3.47E-03 |
| 72 | GO:0043067: regulation of programmed cell death | 3.76E-03 |
| 73 | GO:0006779: porphyrin-containing compound biosynthetic process | 3.76E-03 |
| 74 | GO:0045036: protein targeting to chloroplast | 4.18E-03 |
| 75 | GO:0009641: shade avoidance | 4.18E-03 |
| 76 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.18E-03 |
| 77 | GO:0006415: translational termination | 4.61E-03 |
| 78 | GO:0019684: photosynthesis, light reaction | 4.61E-03 |
| 79 | GO:0009073: aromatic amino acid family biosynthetic process | 4.61E-03 |
| 80 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.61E-03 |
| 81 | GO:0048229: gametophyte development | 4.61E-03 |
| 82 | GO:0006457: protein folding | 5.05E-03 |
| 83 | GO:0010102: lateral root morphogenesis | 5.52E-03 |
| 84 | GO:0010075: regulation of meristem growth | 5.52E-03 |
| 85 | GO:2000012: regulation of auxin polar transport | 5.52E-03 |
| 86 | GO:0010207: photosystem II assembly | 6.00E-03 |
| 87 | GO:0009266: response to temperature stimulus | 6.00E-03 |
| 88 | GO:0009934: regulation of meristem structural organization | 6.00E-03 |
| 89 | GO:0010020: chloroplast fission | 6.00E-03 |
| 90 | GO:0010187: negative regulation of seed germination | 7.52E-03 |
| 91 | GO:0009742: brassinosteroid mediated signaling pathway | 7.61E-03 |
| 92 | GO:0006418: tRNA aminoacylation for protein translation | 8.06E-03 |
| 93 | GO:0031408: oxylipin biosynthetic process | 8.61E-03 |
| 94 | GO:0048511: rhythmic process | 8.61E-03 |
| 95 | GO:0061077: chaperone-mediated protein folding | 8.61E-03 |
| 96 | GO:0030245: cellulose catabolic process | 9.17E-03 |
| 97 | GO:0009411: response to UV | 9.75E-03 |
| 98 | GO:0009686: gibberellin biosynthetic process | 9.75E-03 |
| 99 | GO:0008284: positive regulation of cell proliferation | 1.09E-02 |
| 100 | GO:0000413: protein peptidyl-prolyl isomerization | 1.16E-02 |
| 101 | GO:0048653: anther development | 1.16E-02 |
| 102 | GO:0040008: regulation of growth | 1.19E-02 |
| 103 | GO:0009958: positive gravitropism | 1.22E-02 |
| 104 | GO:0006520: cellular amino acid metabolic process | 1.22E-02 |
| 105 | GO:0010197: polar nucleus fusion | 1.22E-02 |
| 106 | GO:0007623: circadian rhythm | 1.24E-02 |
| 107 | GO:0048544: recognition of pollen | 1.28E-02 |
| 108 | GO:0042752: regulation of circadian rhythm | 1.28E-02 |
| 109 | GO:0009646: response to absence of light | 1.28E-02 |
| 110 | GO:0009735: response to cytokinin | 1.35E-02 |
| 111 | GO:0032502: developmental process | 1.48E-02 |
| 112 | GO:0010090: trichome morphogenesis | 1.55E-02 |
| 113 | GO:0010029: regulation of seed germination | 1.91E-02 |
| 114 | GO:0048481: plant ovule development | 2.22E-02 |
| 115 | GO:0009817: defense response to fungus, incompatible interaction | 2.22E-02 |
| 116 | GO:0000160: phosphorelay signal transduction system | 2.30E-02 |
| 117 | GO:0048527: lateral root development | 2.46E-02 |
| 118 | GO:0045087: innate immune response | 2.63E-02 |
| 119 | GO:0016051: carbohydrate biosynthetic process | 2.63E-02 |
| 120 | GO:0009853: photorespiration | 2.63E-02 |
| 121 | GO:0030001: metal ion transport | 2.88E-02 |
| 122 | GO:0006839: mitochondrial transport | 2.88E-02 |
| 123 | GO:0042542: response to hydrogen peroxide | 3.06E-02 |
| 124 | GO:0000165: MAPK cascade | 3.60E-02 |
| 125 | GO:0009585: red, far-red light phototransduction | 3.89E-02 |
| 126 | GO:0009736: cytokinin-activated signaling pathway | 3.89E-02 |
| 127 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.98E-02 |
| 128 | GO:0030154: cell differentiation | 4.06E-02 |
| 129 | GO:0006412: translation | 4.34E-02 |
| 130 | GO:0048367: shoot system development | 4.48E-02 |
| 131 | GO:0009740: gibberellic acid mediated signaling pathway | 4.78E-02 |
| 132 | GO:0009734: auxin-activated signaling pathway | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030378: serine racemase activity | 0.00E+00 |
| 2 | GO:0003941: L-serine ammonia-lyase activity | 0.00E+00 |
| 3 | GO:0051060: pullulanase activity | 0.00E+00 |
| 4 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 5 | GO:0008721: D-serine ammonia-lyase activity | 0.00E+00 |
| 6 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 7 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 8 | GO:0005201: extracellular matrix structural constituent | 0.00E+00 |
| 9 | GO:0004076: biotin synthase activity | 0.00E+00 |
| 10 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 11 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 12 | GO:0005504: fatty acid binding | 3.82E-06 |
| 13 | GO:0045430: chalcone isomerase activity | 1.67E-05 |
| 14 | GO:0016279: protein-lysine N-methyltransferase activity | 1.67E-05 |
| 15 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.55E-05 |
| 16 | GO:0010313: phytochrome binding | 1.44E-04 |
| 17 | GO:0004134: 4-alpha-glucanotransferase activity | 1.44E-04 |
| 18 | GO:0004645: phosphorylase activity | 1.44E-04 |
| 19 | GO:0019203: carbohydrate phosphatase activity | 1.44E-04 |
| 20 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.44E-04 |
| 21 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 1.44E-04 |
| 22 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 1.44E-04 |
| 23 | GO:0008184: glycogen phosphorylase activity | 1.44E-04 |
| 24 | GO:0050308: sugar-phosphatase activity | 1.44E-04 |
| 25 | GO:0008835: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity | 1.44E-04 |
| 26 | GO:0016630: protochlorophyllide reductase activity | 3.29E-04 |
| 27 | GO:0004614: phosphoglucomutase activity | 3.29E-04 |
| 28 | GO:0004817: cysteine-tRNA ligase activity | 3.29E-04 |
| 29 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 3.29E-04 |
| 30 | GO:0030385: ferredoxin:thioredoxin reductase activity | 3.29E-04 |
| 31 | GO:0008266: poly(U) RNA binding | 3.77E-04 |
| 32 | GO:0005528: FK506 binding | 5.23E-04 |
| 33 | GO:0004075: biotin carboxylase activity | 5.40E-04 |
| 34 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 5.40E-04 |
| 35 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 5.40E-04 |
| 36 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 5.40E-04 |
| 37 | GO:0016992: lipoate synthase activity | 5.40E-04 |
| 38 | GO:0002161: aminoacyl-tRNA editing activity | 5.40E-04 |
| 39 | GO:0004148: dihydrolipoyl dehydrogenase activity | 5.40E-04 |
| 40 | GO:0016851: magnesium chelatase activity | 7.73E-04 |
| 41 | GO:0016149: translation release factor activity, codon specific | 7.73E-04 |
| 42 | GO:0004550: nucleoside diphosphate kinase activity | 7.73E-04 |
| 43 | GO:0043023: ribosomal large subunit binding | 7.73E-04 |
| 44 | GO:0008097: 5S rRNA binding | 7.73E-04 |
| 45 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 7.73E-04 |
| 46 | GO:0051082: unfolded protein binding | 9.85E-04 |
| 47 | GO:0003959: NADPH dehydrogenase activity | 1.29E-03 |
| 48 | GO:0003989: acetyl-CoA carboxylase activity | 1.29E-03 |
| 49 | GO:0019843: rRNA binding | 1.30E-03 |
| 50 | GO:0005507: copper ion binding | 1.38E-03 |
| 51 | GO:0030170: pyridoxal phosphate binding | 1.48E-03 |
| 52 | GO:0004556: alpha-amylase activity | 1.59E-03 |
| 53 | GO:2001070: starch binding | 1.59E-03 |
| 54 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.59E-03 |
| 55 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.91E-03 |
| 56 | GO:0051920: peroxiredoxin activity | 1.91E-03 |
| 57 | GO:0004747: ribokinase activity | 1.91E-03 |
| 58 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.31E-03 |
| 59 | GO:0008865: fructokinase activity | 2.60E-03 |
| 60 | GO:0030674: protein binding, bridging | 2.60E-03 |
| 61 | GO:0016209: antioxidant activity | 2.60E-03 |
| 62 | GO:0042802: identical protein binding | 2.64E-03 |
| 63 | GO:0046914: transition metal ion binding | 2.96E-03 |
| 64 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.32E-03 |
| 65 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 3.35E-03 |
| 66 | GO:0003747: translation release factor activity | 3.35E-03 |
| 67 | GO:0044183: protein binding involved in protein folding | 4.61E-03 |
| 68 | GO:0047372: acylglycerol lipase activity | 4.61E-03 |
| 69 | GO:0000049: tRNA binding | 5.06E-03 |
| 70 | GO:0015266: protein channel activity | 5.52E-03 |
| 71 | GO:0031072: heat shock protein binding | 5.52E-03 |
| 72 | GO:0008083: growth factor activity | 6.00E-03 |
| 73 | GO:0009055: electron carrier activity | 7.98E-03 |
| 74 | GO:0051087: chaperone binding | 8.06E-03 |
| 75 | GO:0043424: protein histidine kinase binding | 8.06E-03 |
| 76 | GO:0033612: receptor serine/threonine kinase binding | 8.61E-03 |
| 77 | GO:0008810: cellulase activity | 9.75E-03 |
| 78 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 1.02E-02 |
| 79 | GO:0004812: aminoacyl-tRNA ligase activity | 1.09E-02 |
| 80 | GO:0001085: RNA polymerase II transcription factor binding | 1.22E-02 |
| 81 | GO:0046983: protein dimerization activity | 1.54E-02 |
| 82 | GO:0000156: phosphorelay response regulator activity | 1.55E-02 |
| 83 | GO:0008237: metallopeptidase activity | 1.69E-02 |
| 84 | GO:0008483: transaminase activity | 1.69E-02 |
| 85 | GO:0000287: magnesium ion binding | 1.89E-02 |
| 86 | GO:0004222: metalloendopeptidase activity | 2.38E-02 |
| 87 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 2.46E-02 |
| 88 | GO:0003735: structural constituent of ribosome | 2.78E-02 |
| 89 | GO:0004364: glutathione transferase activity | 3.06E-02 |
| 90 | GO:0004185: serine-type carboxypeptidase activity | 3.15E-02 |
| 91 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.33E-02 |
| 92 | GO:0005198: structural molecule activity | 3.42E-02 |
| 93 | GO:0003924: GTPase activity | 3.53E-02 |
| 94 | GO:0051287: NAD binding | 3.60E-02 |
| 95 | GO:0003690: double-stranded DNA binding | 3.98E-02 |
| 96 | GO:0004650: polygalacturonase activity | 4.68E-02 |
| 97 | GO:0005524: ATP binding | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009571: proplastid stroma | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.09E-31 |
| 3 | GO:0009570: chloroplast stroma | 4.97E-30 |
| 4 | GO:0009941: chloroplast envelope | 3.87E-18 |
| 5 | GO:0009579: thylakoid | 2.02E-08 |
| 6 | GO:0009534: chloroplast thylakoid | 2.12E-08 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 8.40E-06 |
| 8 | GO:0009508: plastid chromosome | 1.01E-05 |
| 9 | GO:0009536: plastid | 4.18E-05 |
| 10 | GO:0031969: chloroplast membrane | 1.21E-04 |
| 11 | GO:0009295: nucleoid | 1.32E-04 |
| 12 | GO:0009547: plastid ribosome | 1.44E-04 |
| 13 | GO:0009543: chloroplast thylakoid lumen | 1.70E-04 |
| 14 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 3.29E-04 |
| 15 | GO:0046658: anchored component of plasma membrane | 4.53E-04 |
| 16 | GO:0010007: magnesium chelatase complex | 5.40E-04 |
| 17 | GO:0005960: glycine cleavage complex | 7.73E-04 |
| 18 | GO:0010319: stromule | 1.59E-03 |
| 19 | GO:0009533: chloroplast stromal thylakoid | 2.24E-03 |
| 20 | GO:0009707: chloroplast outer membrane | 2.31E-03 |
| 21 | GO:0009501: amyloplast | 2.60E-03 |
| 22 | GO:0031977: thylakoid lumen | 3.46E-03 |
| 23 | GO:0000311: plastid large ribosomal subunit | 5.06E-03 |
| 24 | GO:0043234: protein complex | 7.00E-03 |
| 25 | GO:0042651: thylakoid membrane | 8.06E-03 |
| 26 | GO:0009654: photosystem II oxygen evolving complex | 8.06E-03 |
| 27 | GO:0009532: plastid stroma | 8.61E-03 |
| 28 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.03E-02 |
| 29 | GO:0005840: ribosome | 1.07E-02 |
| 30 | GO:0019898: extrinsic component of membrane | 1.35E-02 |
| 31 | GO:0005615: extracellular space | 1.39E-02 |
| 32 | GO:0030529: intracellular ribonucleoprotein complex | 1.84E-02 |
| 33 | GO:0005667: transcription factor complex | 1.99E-02 |
| 34 | GO:0031225: anchored component of membrane | 2.65E-02 |
| 35 | GO:0005743: mitochondrial inner membrane | 3.28E-02 |