GO Enrichment Analysis of Co-expressed Genes with
AT2G21530
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 2 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 3 | GO:0032544: plastid translation | 4.85E-05 |
| 4 | GO:0042371: vitamin K biosynthetic process | 7.75E-05 |
| 5 | GO:0034337: RNA folding | 7.75E-05 |
| 6 | GO:0015969: guanosine tetraphosphate metabolic process | 7.75E-05 |
| 7 | GO:0051775: response to redox state | 7.75E-05 |
| 8 | GO:0000481: maturation of 5S rRNA | 7.75E-05 |
| 9 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.85E-04 |
| 10 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 3.11E-04 |
| 11 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 4.49E-04 |
| 12 | GO:2001141: regulation of RNA biosynthetic process | 4.49E-04 |
| 13 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.49E-04 |
| 14 | GO:0006107: oxaloacetate metabolic process | 4.49E-04 |
| 15 | GO:0009226: nucleotide-sugar biosynthetic process | 4.49E-04 |
| 16 | GO:0015976: carbon utilization | 5.98E-04 |
| 17 | GO:0031122: cytoplasmic microtubule organization | 5.98E-04 |
| 18 | GO:0006734: NADH metabolic process | 5.98E-04 |
| 19 | GO:0009107: lipoate biosynthetic process | 7.57E-04 |
| 20 | GO:0016123: xanthophyll biosynthetic process | 7.57E-04 |
| 21 | GO:0045038: protein import into chloroplast thylakoid membrane | 7.57E-04 |
| 22 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 9.24E-04 |
| 23 | GO:0015995: chlorophyll biosynthetic process | 9.33E-04 |
| 24 | GO:0010019: chloroplast-nucleus signaling pathway | 1.10E-03 |
| 25 | GO:0009658: chloroplast organization | 1.18E-03 |
| 26 | GO:0009395: phospholipid catabolic process | 1.29E-03 |
| 27 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.29E-03 |
| 28 | GO:0009645: response to low light intensity stimulus | 1.29E-03 |
| 29 | GO:0006400: tRNA modification | 1.29E-03 |
| 30 | GO:0010492: maintenance of shoot apical meristem identity | 1.48E-03 |
| 31 | GO:0042255: ribosome assembly | 1.48E-03 |
| 32 | GO:0006353: DNA-templated transcription, termination | 1.48E-03 |
| 33 | GO:0006605: protein targeting | 1.48E-03 |
| 34 | GO:0032508: DNA duplex unwinding | 1.48E-03 |
| 35 | GO:0017004: cytochrome complex assembly | 1.69E-03 |
| 36 | GO:0071482: cellular response to light stimulus | 1.69E-03 |
| 37 | GO:0000373: Group II intron splicing | 1.91E-03 |
| 38 | GO:0048507: meristem development | 1.91E-03 |
| 39 | GO:0010206: photosystem II repair | 1.91E-03 |
| 40 | GO:0019538: protein metabolic process | 2.37E-03 |
| 41 | GO:0006096: glycolytic process | 2.60E-03 |
| 42 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.61E-03 |
| 43 | GO:0043085: positive regulation of catalytic activity | 2.61E-03 |
| 44 | GO:0006352: DNA-templated transcription, initiation | 2.61E-03 |
| 45 | GO:0045037: protein import into chloroplast stroma | 2.86E-03 |
| 46 | GO:0009767: photosynthetic electron transport chain | 3.12E-03 |
| 47 | GO:0006108: malate metabolic process | 3.12E-03 |
| 48 | GO:0006006: glucose metabolic process | 3.12E-03 |
| 49 | GO:0019253: reductive pentose-phosphate cycle | 3.38E-03 |
| 50 | GO:0006833: water transport | 3.94E-03 |
| 51 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.52E-03 |
| 52 | GO:0019722: calcium-mediated signaling | 5.77E-03 |
| 53 | GO:0009306: protein secretion | 5.77E-03 |
| 54 | GO:0016117: carotenoid biosynthetic process | 6.10E-03 |
| 55 | GO:0008033: tRNA processing | 6.44E-03 |
| 56 | GO:0034220: ion transmembrane transport | 6.44E-03 |
| 57 | GO:0048868: pollen tube development | 6.78E-03 |
| 58 | GO:0045489: pectin biosynthetic process | 6.78E-03 |
| 59 | GO:0032502: developmental process | 8.22E-03 |
| 60 | GO:0007267: cell-cell signaling | 9.36E-03 |
| 61 | GO:0009793: embryo development ending in seed dormancy | 9.86E-03 |
| 62 | GO:0016126: sterol biosynthetic process | 1.02E-02 |
| 63 | GO:0010027: thylakoid membrane organization | 1.02E-02 |
| 64 | GO:0015979: photosynthesis | 1.18E-02 |
| 65 | GO:0016311: dephosphorylation | 1.18E-02 |
| 66 | GO:0018298: protein-chromophore linkage | 1.22E-02 |
| 67 | GO:0009637: response to blue light | 1.45E-02 |
| 68 | GO:0006099: tricarboxylic acid cycle | 1.49E-02 |
| 69 | GO:0006629: lipid metabolic process | 1.52E-02 |
| 70 | GO:0010114: response to red light | 1.73E-02 |
| 71 | GO:0009744: response to sucrose | 1.73E-02 |
| 72 | GO:0042546: cell wall biogenesis | 1.78E-02 |
| 73 | GO:0009644: response to high light intensity | 1.83E-02 |
| 74 | GO:0009409: response to cold | 1.87E-02 |
| 75 | GO:0042538: hyperosmotic salinity response | 2.04E-02 |
| 76 | GO:0006810: transport | 2.07E-02 |
| 77 | GO:0009416: response to light stimulus | 2.71E-02 |
| 78 | GO:0009737: response to abscisic acid | 3.29E-02 |
| 79 | GO:0009790: embryo development | 3.61E-02 |
| 80 | GO:0008380: RNA splicing | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 2 | GO:0005048: signal sequence binding | 0.00E+00 |
| 3 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 4 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 5 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 6 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 7 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 8 | GO:0046906: tetrapyrrole binding | 7.75E-05 |
| 9 | GO:0009496: plastoquinol--plastocyanin reductase activity | 7.75E-05 |
| 10 | GO:0008568: microtubule-severing ATPase activity | 7.75E-05 |
| 11 | GO:0008746: NAD(P)+ transhydrogenase activity | 7.75E-05 |
| 12 | GO:0010291: carotene beta-ring hydroxylase activity | 1.85E-04 |
| 13 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 1.85E-04 |
| 14 | GO:0048531: beta-1,3-galactosyltransferase activity | 1.85E-04 |
| 15 | GO:0004802: transketolase activity | 1.85E-04 |
| 16 | GO:0008728: GTP diphosphokinase activity | 1.85E-04 |
| 17 | GO:0016992: lipoate synthase activity | 3.11E-04 |
| 18 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 4.49E-04 |
| 19 | GO:0048038: quinone binding | 5.60E-04 |
| 20 | GO:0001053: plastid sigma factor activity | 5.98E-04 |
| 21 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.98E-04 |
| 22 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 5.98E-04 |
| 23 | GO:0016987: sigma factor activity | 5.98E-04 |
| 24 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 5.98E-04 |
| 25 | GO:0008374: O-acyltransferase activity | 7.57E-04 |
| 26 | GO:0016615: malate dehydrogenase activity | 9.24E-04 |
| 27 | GO:0030060: L-malate dehydrogenase activity | 1.10E-03 |
| 28 | GO:0019899: enzyme binding | 1.29E-03 |
| 29 | GO:0008312: 7S RNA binding | 1.48E-03 |
| 30 | GO:0016874: ligase activity | 2.94E-03 |
| 31 | GO:0004089: carbonate dehydratase activity | 3.12E-03 |
| 32 | GO:0031072: heat shock protein binding | 3.12E-03 |
| 33 | GO:0008081: phosphoric diester hydrolase activity | 3.12E-03 |
| 34 | GO:0031409: pigment binding | 3.94E-03 |
| 35 | GO:0003727: single-stranded RNA binding | 5.77E-03 |
| 36 | GO:0008080: N-acetyltransferase activity | 6.78E-03 |
| 37 | GO:0015250: water channel activity | 1.02E-02 |
| 38 | GO:0016168: chlorophyll binding | 1.06E-02 |
| 39 | GO:0008236: serine-type peptidase activity | 1.18E-02 |
| 40 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.22E-02 |
| 41 | GO:0004871: signal transducer activity | 1.29E-02 |
| 42 | GO:0003993: acid phosphatase activity | 1.49E-02 |
| 43 | GO:0003729: mRNA binding | 2.10E-02 |
| 44 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.14E-02 |
| 45 | GO:0003690: double-stranded DNA binding | 2.19E-02 |
| 46 | GO:0004650: polygalacturonase activity | 2.58E-02 |
| 47 | GO:0051082: unfolded protein binding | 2.75E-02 |
| 48 | GO:0019843: rRNA binding | 3.23E-02 |
| 49 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.29E-02 |
| 50 | GO:0004252: serine-type endopeptidase activity | 3.48E-02 |
| 51 | GO:0008565: protein transporter activity | 3.67E-02 |
| 52 | GO:0005525: GTP binding | 4.44E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.27E-14 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 6.34E-11 |
| 3 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.95E-07 |
| 4 | GO:0009941: chloroplast envelope | 3.35E-05 |
| 5 | GO:0009782: photosystem I antenna complex | 7.75E-05 |
| 6 | GO:0080085: signal recognition particle, chloroplast targeting | 1.85E-04 |
| 7 | GO:0031969: chloroplast membrane | 2.13E-04 |
| 8 | GO:0009579: thylakoid | 2.20E-04 |
| 9 | GO:0009512: cytochrome b6f complex | 7.57E-04 |
| 10 | GO:0009570: chloroplast stroma | 1.45E-03 |
| 11 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.69E-03 |
| 12 | GO:0032040: small-subunit processome | 2.86E-03 |
| 13 | GO:0030076: light-harvesting complex | 3.66E-03 |
| 14 | GO:0030176: integral component of endoplasmic reticulum membrane | 3.66E-03 |
| 15 | GO:0009543: chloroplast thylakoid lumen | 3.90E-03 |
| 16 | GO:0009654: photosystem II oxygen evolving complex | 4.52E-03 |
| 17 | GO:0042651: thylakoid membrane | 4.52E-03 |
| 18 | GO:0019898: extrinsic component of membrane | 7.49E-03 |
| 19 | GO:0010319: stromule | 9.36E-03 |
| 20 | GO:0030529: intracellular ribonucleoprotein complex | 1.02E-02 |
| 21 | GO:0005840: ribosome | 1.35E-02 |
| 22 | GO:0031977: thylakoid lumen | 1.64E-02 |
| 23 | GO:0048046: apoplast | 1.95E-02 |
| 24 | GO:0009706: chloroplast inner membrane | 2.75E-02 |
| 25 | GO:0010287: plastoglobule | 3.11E-02 |
| 26 | GO:0009534: chloroplast thylakoid | 3.27E-02 |
| 27 | GO:0005623: cell | 3.29E-02 |
| 28 | GO:0046658: anchored component of plasma membrane | 4.95E-02 |