co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G21300

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045014: negative regulation of transcription by glucose	0.00E+00
2	GO:0061062: regulation of nematode larval development	4.47E-07
3	GO:0032958: inositol phosphate biosynthetic process	9.14E-05
4	GO:0006426: glycyl-tRNA aminoacylation	9.14E-05
5	GO:0045786: negative regulation of cell cycle	9.14E-05
6	GO:0010726: positive regulation of hydrogen peroxide metabolic process	9.14E-05
7	GO:0080005: photosystem stoichiometry adjustment	2.16E-04
8	GO:0006863: purine nucleobase transport	2.56E-04
9	GO:0048575: short-day photoperiodism, flowering	3.61E-04
10	GO:0009686: gibberellin biosynthetic process	4.15E-04
11	GO:0010321: regulation of vegetative phase change	5.20E-04
12	GO:0006020: inositol metabolic process	5.20E-04
13	GO:0007276: gamete generation	5.20E-04
14	GO:0016556: mRNA modification	5.20E-04
15	GO:0048364: root development	6.03E-04
16	GO:0042991: transcription factor import into nucleus	6.90E-04
17	GO:0019760: glucosinolate metabolic process	8.34E-04
18	GO:0006351: transcription, DNA-templated	8.38E-04
19	GO:0010942: positive regulation of cell death	1.07E-03
20	GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity	1.07E-03
21	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.27E-03
22	GO:0045995: regulation of embryonic development	1.49E-03
23	GO:0007050: cell cycle arrest	1.49E-03
24	GO:0010492: maintenance of shoot apical meristem identity	1.72E-03
25	GO:0042255: ribosome assembly	1.72E-03
26	GO:0006353: DNA-templated transcription, termination	1.72E-03
27	GO:0048366: leaf development	1.91E-03
28	GO:0048589: developmental growth	2.21E-03
29	GO:1900865: chloroplast RNA modification	2.48E-03
30	GO:0031425: chloroplast RNA processing	2.48E-03
31	GO:0009664: plant-type cell wall organization	2.56E-03
32	GO:0009641: shade avoidance	2.75E-03
33	GO:0006949: syncytium formation	2.75E-03
34	GO:0008285: negative regulation of cell proliferation	3.03E-03
35	GO:0010152: pollen maturation	3.32E-03
36	GO:0012501: programmed cell death	3.32E-03
37	GO:0005983: starch catabolic process	3.32E-03
38	GO:0006355: regulation of transcription, DNA-templated	3.41E-03
39	GO:0009767: photosynthetic electron transport chain	3.63E-03
40	GO:0009740: gibberellic acid mediated signaling pathway	3.67E-03
41	GO:0009624: response to nematode	3.89E-03
42	GO:0007034: vacuolar transport	3.93E-03
43	GO:0009887: animal organ morphogenesis	3.93E-03
44	GO:0006302: double-strand break repair	3.93E-03
45	GO:0048768: root hair cell tip growth	3.93E-03
46	GO:0009969: xyloglucan biosynthetic process	4.26E-03
47	GO:0019953: sexual reproduction	5.27E-03
48	GO:0051321: meiotic cell cycle	5.62E-03
49	GO:0009908: flower development	6.06E-03
50	GO:0042127: regulation of cell proliferation	6.73E-03
51	GO:0048443: stamen development	6.73E-03
52	GO:0009739: response to gibberellin	7.49E-03
53	GO:0000271: polysaccharide biosynthetic process	7.51E-03
54	GO:0006470: protein dephosphorylation	7.66E-03
55	GO:0045489: pectin biosynthetic process	7.91E-03
56	GO:0048825: cotyledon development	8.74E-03
57	GO:0071554: cell wall organization or biogenesis	9.16E-03
58	GO:0002229: defense response to oomycetes	9.16E-03
59	GO:0010583: response to cyclopentenone	9.60E-03
60	GO:0032502: developmental process	9.60E-03
61	GO:0009826: unidimensional cell growth	9.99E-03
62	GO:0030163: protein catabolic process	1.00E-02
63	GO:0009828: plant-type cell wall loosening	1.05E-02
64	GO:0048573: photoperiodism, flowering	1.33E-02
65	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.33E-02
66	GO:0016311: dephosphorylation	1.38E-02
67	GO:0009817: defense response to fungus, incompatible interaction	1.43E-02
68	GO:0045892: negative regulation of transcription, DNA-templated	1.57E-02
69	GO:0016051: carbohydrate biosynthetic process	1.69E-02
70	GO:0006839: mitochondrial transport	1.86E-02
71	GO:0030154: cell differentiation	1.88E-02
72	GO:0009733: response to auxin	1.95E-02
73	GO:0009736: cytokinin-activated signaling pathway	2.51E-02
74	GO:0006417: regulation of translation	2.70E-02
75	GO:0048367: shoot system development	2.89E-02
76	GO:0009742: brassinosteroid mediated signaling pathway	3.36E-02
77	GO:0009416: response to light stimulus	3.38E-02
78	GO:0051301: cell division	3.68E-02
79	GO:0040008: regulation of growth	4.60E-02
80	GO:0007623: circadian rhythm	4.75E-02
81	GO:0009793: embryo development ending in seed dormancy	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0009899: ent-kaurene synthase activity	0.00E+00
2	GO:0004820: glycine-tRNA ligase activity	9.14E-05
3	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	9.14E-05
4	GO:0000829: inositol heptakisphosphate kinase activity	9.14E-05
5	GO:0000828: inositol hexakisphosphate kinase activity	9.14E-05
6	GO:0019156: isoamylase activity	2.16E-04
7	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	2.16E-04
8	GO:0005345: purine nucleobase transmembrane transporter activity	3.15E-04
9	GO:0043565: sequence-specific DNA binding	4.02E-04
10	GO:0045544: gibberellin 20-oxidase activity	5.20E-04
11	GO:0010011: auxin binding	6.90E-04
12	GO:0030332: cyclin binding	1.07E-03
13	GO:0004556: alpha-amylase activity	1.07E-03
14	GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity	1.07E-03
15	GO:0004722: protein serine/threonine phosphatase activity	2.87E-03
16	GO:0004860: protein kinase inhibitor activity	3.03E-03
17	GO:0008378: galactosyltransferase activity	3.32E-03
18	GO:0009055: electron carrier activity	3.64E-03
19	GO:0004519: endonuclease activity	3.71E-03
20	GO:0003712: transcription cofactor activity	4.26E-03
21	GO:0004190: aspartic-type endopeptidase activity	4.26E-03
22	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.32E-03
23	GO:0008408: 3'-5' exonuclease activity	5.62E-03
24	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	5.98E-03
25	GO:0003727: single-stranded RNA binding	6.73E-03
26	GO:0001085: RNA polymerase II transcription factor binding	7.91E-03
27	GO:0016853: isomerase activity	8.32E-03
28	GO:0016791: phosphatase activity	1.05E-02
29	GO:0016413: O-acetyltransferase activity	1.14E-02
30	GO:0005096: GTPase activator activity	1.48E-02
31	GO:0030145: manganese ion binding	1.59E-02
32	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.59E-02
33	GO:0042803: protein homodimerization activity	1.62E-02
34	GO:0044212: transcription regulatory region DNA binding	1.69E-02
35	GO:0046983: protein dimerization activity	2.43E-02
36	GO:0003690: double-stranded DNA binding	2.57E-02
37	GO:0004672: protein kinase activity	2.74E-02
38	GO:0016887: ATPase activity	2.95E-02
39	GO:0003677: DNA binding	3.20E-02
40	GO:0015035: protein disulfide oxidoreductase activity	3.29E-02
41	GO:0016758: transferase activity, transferring hexosyl groups	3.71E-02
42	GO:0019843: rRNA binding	3.78E-02
43	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.15E-02
44	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.52E-02
45	GO:0005507: copper ion binding	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0000791: euchromatin	9.14E-05
3	GO:0030870: Mre11 complex	2.16E-04
4	GO:0009569: chloroplast starch grain	2.16E-04
5	GO:0008287: protein serine/threonine phosphatase complex	3.61E-04
6	GO:0009531: secondary cell wall	5.20E-04
7	GO:0000795: synaptonemal complex	8.73E-04
8	GO:0000815: ESCRT III complex	1.27E-03
9	GO:0009508: plastid chromosome	3.63E-03
10	GO:0009570: chloroplast stroma	7.52E-03
11	GO:0046658: anchored component of plasma membrane	8.87E-03
12	GO:0000785: chromatin	9.60E-03
13	GO:0009295: nucleoid	1.09E-02
14	GO:0005667: transcription factor complex	1.28E-02
15	GO:0005654: nucleoplasm	3.71E-02
16	GO:0005886: plasma membrane	4.75E-02