Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G20230

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010203: response to very low fluence red light stimulus0.00E+00
2GO:0042547: cell wall modification involved in multidimensional cell growth1.67E-05
3GO:0015798: myo-inositol transport1.67E-05
4GO:0010201: response to continuous far red light stimulus by the high-irradiance response system1.67E-05
5GO:0043087: regulation of GTPase activity1.67E-05
6GO:0048508: embryonic meristem development1.67E-05
7GO:0090351: seedling development1.94E-05
8GO:0009945: radial axis specification4.35E-05
9GO:0043255: regulation of carbohydrate biosynthetic process4.35E-05
10GO:0017006: protein-tetrapyrrole linkage7.77E-05
11GO:2000082: regulation of L-ascorbic acid biosynthetic process7.77E-05
12GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.17E-04
13GO:0009584: detection of visible light1.17E-04
14GO:0009226: nucleotide-sugar biosynthetic process1.17E-04
15GO:0071555: cell wall organization1.23E-04
16GO:0071483: cellular response to blue light1.61E-04
17GO:0006552: leucine catabolic process1.61E-04
18GO:0050665: hydrogen peroxide biosynthetic process2.59E-04
19GO:0009920: cell plate formation involved in plant-type cell wall biogenesis2.59E-04
20GO:0009942: longitudinal axis specification3.11E-04
21GO:0009854: oxidative photosynthetic carbon pathway3.11E-04
22GO:0009612: response to mechanical stimulus3.11E-04
23GO:0017148: negative regulation of translation3.11E-04
24GO:0022904: respiratory electron transport chain3.66E-04
25GO:0010161: red light signaling pathway3.66E-04
26GO:0009645: response to low light intensity stimulus3.66E-04
27GO:0009808: lignin metabolic process4.82E-04
28GO:0009932: cell tip growth4.82E-04
29GO:0071482: cellular response to light stimulus4.82E-04
30GO:0046685: response to arsenic-containing substance5.42E-04
31GO:0009638: phototropism6.04E-04
32GO:0010215: cellulose microfibril organization6.68E-04
33GO:0006352: DNA-templated transcription, initiation7.34E-04
34GO:0000272: polysaccharide catabolic process7.34E-04
35GO:0010152: pollen maturation8.01E-04
36GO:0009767: photosynthetic electron transport chain8.70E-04
37GO:0005986: sucrose biosynthetic process8.70E-04
38GO:0009833: plant-type primary cell wall biogenesis1.08E-03
39GO:0006833: water transport1.08E-03
40GO:0010073: meristem maintenance1.23E-03
41GO:0006825: copper ion transport1.23E-03
42GO:0051260: protein homooligomerization1.31E-03
43GO:0006730: one-carbon metabolic process1.39E-03
44GO:0009814: defense response, incompatible interaction1.39E-03
45GO:0034220: ion transmembrane transport1.73E-03
46GO:0048653: anther development1.73E-03
47GO:0009646: response to absence of light1.91E-03
48GO:0071554: cell wall organization or biogenesis2.09E-03
49GO:0009630: gravitropism2.18E-03
50GO:0016126: sterol biosynthetic process2.68E-03
51GO:0010411: xyloglucan metabolic process2.99E-03
52GO:0016049: cell growth3.09E-03
53GO:0018298: protein-chromophore linkage3.20E-03
54GO:0030244: cellulose biosynthetic process3.20E-03
55GO:0010218: response to far red light3.42E-03
56GO:0009834: plant-type secondary cell wall biogenesis3.42E-03
57GO:0009853: photorespiration3.76E-03
58GO:0009640: photomorphogenesis4.47E-03
59GO:0042546: cell wall biogenesis4.59E-03
60GO:0055085: transmembrane transport4.85E-03
61GO:0009846: pollen germination5.22E-03
62GO:0009809: lignin biosynthetic process5.48E-03
63GO:0009585: red, far-red light phototransduction5.48E-03
64GO:0055114: oxidation-reduction process6.79E-03
65GO:0009414: response to water deprivation7.55E-03
66GO:0009058: biosynthetic process8.47E-03
67GO:0045490: pectin catabolic process1.02E-02
68GO:0006810: transport1.14E-02
69GO:0046686: response to cadmium ion1.21E-02
70GO:0009826: unidimensional cell growth1.36E-02
71GO:0042254: ribosome biogenesis1.41E-02
72GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.66E-02
73GO:0044550: secondary metabolite biosynthetic process1.72E-02
74GO:0006508: proteolysis2.39E-02
75GO:0009735: response to cytokinin3.02E-02
76GO:0045893: positive regulation of transcription, DNA-templated3.55E-02
RankGO TermAdjusted P value
1GO:0048039: ubiquinone binding0.00E+00
2GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor0.00E+00
3GO:0004174: electron-transferring-flavoprotein dehydrogenase activity0.00E+00
4GO:0031516: far-red light photoreceptor activity1.67E-05
5GO:0004008: copper-exporting ATPase activity1.67E-05
6GO:0005366: myo-inositol:proton symporter activity4.35E-05
7GO:0009883: red or far-red light photoreceptor activity4.35E-05
8GO:0004326: tetrahydrofolylpolyglutamate synthase activity4.35E-05
9GO:0008020: G-protein coupled photoreceptor activity7.77E-05
10GO:0050307: sucrose-phosphate phosphatase activity7.77E-05
11GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity1.17E-04
12GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity1.17E-04
13GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity1.17E-04
14GO:0008891: glycolate oxidase activity1.61E-04
15GO:0001053: plastid sigma factor activity1.61E-04
16GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.61E-04
17GO:0016987: sigma factor activity1.61E-04
18GO:0004506: squalene monooxygenase activity1.61E-04
19GO:0048040: UDP-glucuronate decarboxylase activity2.59E-04
20GO:0016161: beta-amylase activity3.11E-04
21GO:0005375: copper ion transmembrane transporter activity4.82E-04
22GO:0004673: protein histidine kinase activity6.68E-04
23GO:0000155: phosphorelay sensor kinase activity8.70E-04
24GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism8.70E-04
25GO:0004190: aspartic-type endopeptidase activity1.01E-03
26GO:0016779: nucleotidyltransferase activity1.39E-03
27GO:0016760: cellulose synthase (UDP-forming) activity1.47E-03
28GO:0030570: pectate lyase activity1.47E-03
29GO:0010181: FMN binding1.91E-03
30GO:0050662: coenzyme binding1.91E-03
31GO:0016762: xyloglucan:xyloglucosyl transferase activity2.09E-03
32GO:0048038: quinone binding2.09E-03
33GO:0016759: cellulose synthase activity2.38E-03
34GO:0016722: oxidoreductase activity, oxidizing metal ions2.48E-03
35GO:0016413: O-acetyltransferase activity2.57E-03
36GO:0015250: water channel activity2.68E-03
37GO:0016798: hydrolase activity, acting on glycosyl bonds2.99E-03
38GO:0005096: GTPase activator activity3.31E-03
39GO:0051539: 4 iron, 4 sulfur cluster binding4.11E-03
40GO:0035091: phosphatidylinositol binding4.71E-03
41GO:0003899: DNA-directed 5'-3' RNA polymerase activity5.48E-03
42GO:0003824: catalytic activity8.49E-03
43GO:0016829: lyase activity8.63E-03
44GO:0015144: carbohydrate transmembrane transporter activity9.26E-03
45GO:0005351: sugar:proton symporter activity1.01E-02
46GO:0003729: mRNA binding1.15E-02
47GO:0042802: identical protein binding1.21E-02
48GO:0000287: magnesium ion binding1.37E-02
49GO:0050660: flavin adenine dinucleotide binding1.54E-02
50GO:0008233: peptidase activity1.60E-02
51GO:0052689: carboxylic ester hydrolase activity1.74E-02
52GO:0042803: protein homodimerization activity1.91E-02
53GO:0004871: signal transducer activity1.91E-02
54GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.95E-02
55GO:0009055: electron carrier activity2.25E-02
56GO:0005515: protein binding2.27E-02
57GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.93E-02
58GO:0019825: oxygen binding4.14E-02
59GO:0005507: copper ion binding4.14E-02
RankGO TermAdjusted P value
1GO:0017133: mitochondrial electron transfer flavoprotein complex0.00E+00
2GO:0046658: anchored component of plasma membrane2.10E-06
3GO:0009506: plasmodesma5.52E-05
4GO:0048046: apoplast1.49E-04
5GO:0030660: Golgi-associated vesicle membrane1.61E-04
6GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane1.61E-04
7GO:0031305: integral component of mitochondrial inner membrane4.23E-04
8GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane4.23E-04
9GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)5.42E-04
10GO:0016604: nuclear body6.04E-04
11GO:0005740: mitochondrial envelope6.68E-04
12GO:0005765: lysosomal membrane7.34E-04
13GO:0031225: anchored component of membrane7.68E-04
14GO:0009574: preprophase band8.70E-04
15GO:0005768: endosome9.29E-04
16GO:0016020: membrane1.57E-03
17GO:0005887: integral component of plasma membrane2.94E-03
18GO:0005886: plasma membrane3.16E-03
19GO:0005777: peroxisome4.40E-03
20GO:0005618: cell wall5.97E-03
21GO:0005802: trans-Golgi network6.12E-03
22GO:0016607: nuclear speck6.28E-03
23GO:0010008: endosome membrane6.28E-03
24GO:0005759: mitochondrial matrix9.58E-03
25GO:0009505: plant-type cell wall9.70E-03
26GO:0009705: plant-type vacuole membrane1.02E-02
27GO:0005794: Golgi apparatus1.07E-02
28GO:0031969: chloroplast membrane1.62E-02
29GO:0009535: chloroplast thylakoid membrane1.74E-02
30GO:0022626: cytosolic ribosome3.12E-02
31GO:0016021: integral component of membrane3.38E-02
32GO:0009507: chloroplast3.48E-02
33GO:0005773: vacuole4.12E-02
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Gene type



Gene DE type