co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G19930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
2	GO:0071497: cellular response to freezing	1.37E-04
3	GO:1900033: negative regulation of trichome patterning	1.37E-04
4	GO:0006568: tryptophan metabolic process	1.37E-04
5	GO:0071398: cellular response to fatty acid	2.34E-04
6	GO:0033591: response to L-ascorbic acid	2.34E-04
7	GO:1901657: glycosyl compound metabolic process	4.24E-04
8	GO:0009755: hormone-mediated signaling pathway	4.56E-04
9	GO:1901141: regulation of lignin biosynthetic process	4.56E-04
10	GO:0048629: trichome patterning	4.56E-04
11	GO:0042274: ribosomal small subunit biogenesis	4.56E-04
12	GO:0010438: cellular response to sulfur starvation	5.78E-04
13	GO:0009959: negative gravitropism	7.07E-04
14	GO:0030488: tRNA methylation	8.44E-04
15	GO:2000033: regulation of seed dormancy process	8.44E-04
16	GO:0031930: mitochondria-nucleus signaling pathway	8.44E-04
17	GO:0010161: red light signaling pathway	9.85E-04
18	GO:0006955: immune response	9.85E-04
19	GO:2000070: regulation of response to water deprivation	1.13E-03
20	GO:0009819: drought recovery	1.13E-03
21	GO:0046620: regulation of organ growth	1.13E-03
22	GO:0010439: regulation of glucosinolate biosynthetic process	1.13E-03
23	GO:0010099: regulation of photomorphogenesis	1.29E-03
24	GO:0010100: negative regulation of photomorphogenesis	1.29E-03
25	GO:0006783: heme biosynthetic process	1.45E-03
26	GO:0009753: response to jasmonic acid	1.62E-03
27	GO:0031425: chloroplast RNA processing	1.62E-03
28	GO:0010015: root morphogenesis	1.97E-03
29	GO:0009698: phenylpropanoid metabolic process	1.97E-03
30	GO:0009682: induced systemic resistance	1.97E-03
31	GO:0006357: regulation of transcription from RNA polymerase II promoter	2.11E-03
32	GO:0010105: negative regulation of ethylene-activated signaling pathway	2.16E-03
33	GO:0009767: photosynthetic electron transport chain	2.36E-03
34	GO:0070588: calcium ion transmembrane transport	2.76E-03
35	GO:0019762: glucosinolate catabolic process	2.97E-03
36	GO:0010187: negative regulation of seed germination	3.18E-03
37	GO:0080147: root hair cell development	3.18E-03
38	GO:0016998: cell wall macromolecule catabolic process	3.63E-03
39	GO:0031348: negative regulation of defense response	3.86E-03
40	GO:0009625: response to insect	4.10E-03
41	GO:0009693: ethylene biosynthetic process	4.10E-03
42	GO:0009686: gibberellin biosynthetic process	4.10E-03
43	GO:0010091: trichome branching	4.34E-03
44	GO:0009960: endosperm development	5.09E-03
45	GO:0010583: response to cyclopentenone	6.15E-03
46	GO:0009828: plant-type cell wall loosening	6.71E-03
47	GO:0010252: auxin homeostasis	6.71E-03
48	GO:0010029: regulation of seed germination	7.89E-03
49	GO:0015995: chlorophyll biosynthetic process	8.50E-03
50	GO:0009751: response to salicylic acid	9.87E-03
51	GO:0009631: cold acclimation	1.01E-02
52	GO:0009867: jasmonic acid mediated signaling pathway	1.08E-02
53	GO:0008152: metabolic process	1.10E-02
54	GO:0009644: response to high light intensity	1.36E-02
55	GO:0008643: carbohydrate transport	1.36E-02
56	GO:0006855: drug transmembrane transport	1.44E-02
57	GO:0009740: gibberellic acid mediated signaling pathway	1.96E-02
58	GO:0006396: RNA processing	2.09E-02
59	GO:0010150: leaf senescence	3.02E-02
60	GO:0009451: RNA modification	3.07E-02
61	GO:0009739: response to gibberellin	3.27E-02
62	GO:0006470: protein dephosphorylation	3.32E-02
63	GO:0009617: response to bacterium	3.42E-02
64	GO:0030154: cell differentiation	3.92E-02
65	GO:0009733: response to auxin	4.04E-02
66	GO:0009723: response to ethylene	4.57E-02
67	GO:0080167: response to karrikin	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0097100: supercoiled DNA binding	0.00E+00
2	GO:0050139: nicotinate-N-glucosyltransferase activity	5.64E-05
3	GO:0004425: indole-3-glycerol-phosphate synthase activity	5.64E-05
4	GO:0042834: peptidoglycan binding	5.64E-05
5	GO:0010313: phytochrome binding	5.64E-05
6	GO:0102483: scopolin beta-glucosidase activity	6.28E-04
7	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	8.44E-04
8	GO:0008422: beta-glucosidase activity	9.43E-04
9	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	1.14E-03
10	GO:0008173: RNA methyltransferase activity	1.29E-03
11	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	1.30E-03
12	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	1.45E-03
13	GO:0044212: transcription regulatory region DNA binding	1.45E-03
14	GO:0016207: 4-coumarate-CoA ligase activity	1.45E-03
15	GO:0030234: enzyme regulator activity	1.79E-03
16	GO:0000976: transcription regulatory region sequence-specific DNA binding	2.16E-03
17	GO:0005262: calcium channel activity	2.36E-03
18	GO:0031418: L-ascorbic acid binding	3.18E-03
19	GO:0005345: purine nucleobase transmembrane transporter activity	3.40E-03
20	GO:0008514: organic anion transmembrane transporter activity	4.34E-03
21	GO:0016759: cellulose synthase activity	6.71E-03
22	GO:0015238: drug transmembrane transporter activity	9.45E-03
23	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.01E-02
24	GO:0042393: histone binding	1.18E-02
25	GO:0003777: microtubule motor activity	1.71E-02
26	GO:0043565: sequence-specific DNA binding	1.72E-02
27	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.92E-02
28	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.92E-02
29	GO:0016874: ligase activity	1.96E-02
30	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.23E-02
31	GO:0015297: antiporter activity	2.92E-02
32	GO:0008017: microtubule binding	3.12E-02
33	GO:0003677: DNA binding	3.14E-02
34	GO:0008194: UDP-glycosyltransferase activity	3.27E-02
35	GO:0042802: identical protein binding	3.58E-02
36	GO:0005215: transporter activity	3.98E-02
37	GO:0016788: hydrolase activity, acting on ester bonds	4.17E-02
38	GO:0050660: flavin adenine dinucleotide binding	4.57E-02

Rank	GO Term	Adjusted P value
1	GO:0009544: chloroplast ATP synthase complex	4.56E-04
2	GO:0010494: cytoplasmic stress granule	1.45E-03
3	GO:0009654: photosystem II oxygen evolving complex	3.40E-03
4	GO:0005770: late endosome	5.09E-03
5	GO:0019898: extrinsic component of membrane	5.61E-03
6	GO:0000932: P-body	7.59E-03
7	GO:0031902: late endosome membrane	1.22E-02
8	GO:0010008: endosome membrane	1.83E-02
9	GO:0005834: heterotrimeric G-protein complex	1.88E-02
10	GO:0031225: anchored component of membrane	2.78E-02
11	GO:0046658: anchored component of plasma membrane	3.69E-02
12	GO:0005874: microtubule	4.68E-02