co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G16270

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042352: GDP-L-fucose salvage	0.00E+00
2	GO:0061157: mRNA destabilization	0.00E+00
3	GO:0010422: regulation of brassinosteroid biosynthetic process	0.00E+00
4	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
5	GO:0009734: auxin-activated signaling pathway	2.42E-05
6	GO:0010588: cotyledon vascular tissue pattern formation	4.75E-05
7	GO:0048497: maintenance of floral organ identity	8.37E-05
8	GO:0009733: response to auxin	1.32E-04
9	GO:0046620: regulation of organ growth	2.76E-04
10	GO:0000305: response to oxygen radical	2.82E-04
11	GO:0000023: maltose metabolic process	2.82E-04
12	GO:0048016: inositol phosphate-mediated signaling	2.82E-04
13	GO:0006434: seryl-tRNA aminoacylation	2.82E-04
14	GO:0030198: extracellular matrix organization	2.82E-04
15	GO:0006438: valyl-tRNA aminoacylation	2.82E-04
16	GO:0046520: sphingoid biosynthetic process	2.82E-04
17	GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process	2.82E-04
18	GO:0010480: microsporocyte differentiation	2.82E-04
19	GO:0015904: tetracycline transport	2.82E-04
20	GO:0043039: tRNA aminoacylation	6.19E-04
21	GO:0009629: response to gravity	6.19E-04
22	GO:0007154: cell communication	6.19E-04
23	GO:0018026: peptidyl-lysine monomethylation	6.19E-04
24	GO:0071497: cellular response to freezing	6.19E-04
25	GO:0080009: mRNA methylation	6.19E-04
26	GO:0006568: tryptophan metabolic process	6.19E-04
27	GO:2000012: regulation of auxin polar transport	8.46E-04
28	GO:0010102: lateral root morphogenesis	8.46E-04
29	GO:0033591: response to L-ascorbic acid	1.00E-03
30	GO:0071398: cellular response to fatty acid	1.00E-03
31	GO:0030261: chromosome condensation	1.00E-03
32	GO:0010371: regulation of gibberellin biosynthetic process	1.44E-03
33	GO:0006749: glutathione metabolic process	1.92E-03
34	GO:0009755: hormone-mediated signaling pathway	1.92E-03
35	GO:1901141: regulation of lignin biosynthetic process	1.92E-03
36	GO:0010051: xylem and phloem pattern formation	2.39E-03
37	GO:0010438: cellular response to sulfur starvation	2.46E-03
38	GO:0032957: inositol trisphosphate metabolic process	2.46E-03
39	GO:0016131: brassinosteroid metabolic process	2.46E-03
40	GO:0010305: leaf vascular tissue pattern formation	2.58E-03
41	GO:0010182: sugar mediated signaling pathway	2.58E-03
42	GO:0018258: protein O-linked glycosylation via hydroxyproline	3.03E-03
43	GO:0046855: inositol phosphate dephosphorylation	3.03E-03
44	GO:0009913: epidermal cell differentiation	3.03E-03
45	GO:0060918: auxin transport	3.03E-03
46	GO:1902456: regulation of stomatal opening	3.03E-03
47	GO:0042793: transcription from plastid promoter	3.03E-03
48	GO:0010405: arabinogalactan protein metabolic process	3.03E-03
49	GO:0071554: cell wall organization or biogenesis	3.18E-03
50	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.61E-03
51	GO:0010067: procambium histogenesis	3.65E-03
52	GO:2000033: regulation of seed dormancy process	3.65E-03
53	GO:0031930: mitochondria-nucleus signaling pathway	3.65E-03
54	GO:0030488: tRNA methylation	3.65E-03
55	GO:0030497: fatty acid elongation	4.30E-03
56	GO:0048437: floral organ development	4.30E-03
57	GO:0030307: positive regulation of cell growth	4.30E-03
58	GO:0010027: thylakoid membrane organization	4.59E-03
59	GO:0009819: drought recovery	4.99E-03
60	GO:0010439: regulation of glucosinolate biosynthetic process	4.99E-03
61	GO:0009704: de-etiolation	4.99E-03
62	GO:2000070: regulation of response to water deprivation	4.99E-03
63	GO:0007275: multicellular organism development	5.72E-03
64	GO:0016042: lipid catabolic process	5.93E-03
65	GO:0040008: regulation of growth	6.22E-03
66	GO:0006949: syncytium formation	8.11E-03
67	GO:0010162: seed dormancy process	8.11E-03
68	GO:0048829: root cap development	8.11E-03
69	GO:0009641: shade avoidance	8.11E-03
70	GO:0046856: phosphatidylinositol dephosphorylation	8.97E-03
71	GO:0009773: photosynthetic electron transport in photosystem I	8.97E-03
72	GO:0009682: induced systemic resistance	8.97E-03
73	GO:0009073: aromatic amino acid family biosynthetic process	8.97E-03
74	GO:0048229: gametophyte development	8.97E-03
75	GO:0006631: fatty acid metabolic process	9.03E-03
76	GO:0009926: auxin polar transport	9.80E-03
77	GO:0012501: programmed cell death	9.88E-03
78	GO:0005983: starch catabolic process	9.88E-03
79	GO:0010105: negative regulation of ethylene-activated signaling pathway	9.88E-03
80	GO:0009767: photosynthetic electron transport chain	1.08E-02
81	GO:0030048: actin filament-based movement	1.08E-02
82	GO:0010628: positive regulation of gene expression	1.08E-02
83	GO:0010075: regulation of meristem growth	1.08E-02
84	GO:0010020: chloroplast fission	1.18E-02
85	GO:0009934: regulation of meristem structural organization	1.18E-02
86	GO:0090351: seedling development	1.28E-02
87	GO:0006071: glycerol metabolic process	1.38E-02
88	GO:0009416: response to light stimulus	1.48E-02
89	GO:0005992: trehalose biosynthetic process	1.48E-02
90	GO:0019953: sexual reproduction	1.59E-02
91	GO:0006418: tRNA aminoacylation for protein translation	1.59E-02
92	GO:0010431: seed maturation	1.70E-02
93	GO:0003333: amino acid transmembrane transport	1.70E-02
94	GO:0007005: mitochondrion organization	1.81E-02
95	GO:0019748: secondary metabolic process	1.81E-02
96	GO:0009624: response to nematode	1.89E-02
97	GO:0009693: ethylene biosynthetic process	1.93E-02
98	GO:0071215: cellular response to abscisic acid stimulus	1.93E-02
99	GO:0009625: response to insect	1.93E-02
100	GO:0045892: negative regulation of transcription, DNA-templated	1.94E-02
101	GO:0010091: trichome branching	2.05E-02
102	GO:0048653: anther development	2.29E-02
103	GO:0080022: primary root development	2.29E-02
104	GO:0010087: phloem or xylem histogenesis	2.29E-02
105	GO:0010118: stomatal movement	2.29E-02
106	GO:0009058: biosynthetic process	2.50E-02
107	GO:0009646: response to absence of light	2.54E-02
108	GO:0048825: cotyledon development	2.67E-02
109	GO:0016132: brassinosteroid biosynthetic process	2.81E-02
110	GO:0010583: response to cyclopentenone	2.94E-02
111	GO:0032502: developmental process	2.94E-02
112	GO:0030163: protein catabolic process	3.08E-02
113	GO:1901657: glycosyl compound metabolic process	3.08E-02
114	GO:0009828: plant-type cell wall loosening	3.22E-02
115	GO:0006351: transcription, DNA-templated	3.23E-02
116	GO:0051607: defense response to virus	3.50E-02
117	GO:0007166: cell surface receptor signaling pathway	3.73E-02
118	GO:0048573: photoperiodism, flowering	4.10E-02
119	GO:0048481: plant ovule development	4.41E-02
120	GO:0006468: protein phosphorylation	4.49E-02
121	GO:0000160: phosphorelay signal transduction system	4.56E-02
122	GO:0009813: flavonoid biosynthetic process	4.56E-02
123	GO:0006355: regulation of transcription, DNA-templated	4.66E-02
124	GO:0007165: signal transduction	4.73E-02
125	GO:0009738: abscisic acid-activated signaling pathway	4.82E-02
126	GO:0009631: cold acclimation	4.88E-02
127	GO:0048527: lateral root development	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0005201: extracellular matrix structural constituent	0.00E+00
2	GO:0047341: fucose-1-phosphate guanylyltransferase activity	0.00E+00
3	GO:0005363: maltose transmembrane transporter activity	0.00E+00
4	GO:0050201: fucokinase activity	0.00E+00
5	GO:0071633: dihydroceramidase activity	0.00E+00
6	GO:0047661: amino-acid racemase activity	0.00E+00
7	GO:0008922: long-chain fatty acid [acyl-carrier-protein] ligase activity	0.00E+00
8	GO:0000170: sphingosine hydroxylase activity	2.82E-04
9	GO:0050139: nicotinate-N-glucosyltransferase activity	2.82E-04
10	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.82E-04
11	GO:0004828: serine-tRNA ligase activity	2.82E-04
12	GO:0046030: inositol trisphosphate phosphatase activity	2.82E-04
13	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	2.82E-04
14	GO:0009374: biotin binding	2.82E-04
15	GO:0004832: valine-tRNA ligase activity	2.82E-04
16	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	6.19E-04
17	GO:0042284: sphingolipid delta-4 desaturase activity	6.19E-04
18	GO:0008493: tetracycline transporter activity	6.19E-04
19	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	6.19E-04
20	GO:0004362: glutathione-disulfide reductase activity	6.19E-04
21	GO:0001872: (1->3)-beta-D-glucan binding	1.44E-03
22	GO:0004335: galactokinase activity	1.92E-03
23	GO:0016279: protein-lysine N-methyltransferase activity	1.92E-03
24	GO:0004523: RNA-DNA hybrid ribonuclease activity	2.46E-03
25	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.46E-03
26	GO:0003989: acetyl-CoA carboxylase activity	2.46E-03
27	GO:1990714: hydroxyproline O-galactosyltransferase activity	3.03E-03
28	GO:0004709: MAP kinase kinase kinase activity	3.03E-03
29	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	3.03E-03
30	GO:0004518: nuclease activity	3.39E-03
31	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	3.65E-03
32	GO:0016832: aldehyde-lyase activity	3.65E-03
33	GO:0052689: carboxylic ester hydrolase activity	3.99E-03
34	GO:0016413: O-acetyltransferase activity	4.33E-03
35	GO:0004871: signal transducer activity	4.83E-03
36	GO:0008173: RNA methyltransferase activity	5.72E-03
37	GO:0008889: glycerophosphodiester phosphodiesterase activity	6.48E-03
38	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	6.48E-03
39	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	6.92E-03
40	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	7.59E-03
41	GO:0004805: trehalose-phosphatase activity	8.11E-03
42	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	9.88E-03
43	GO:0008289: lipid binding	1.02E-02
44	GO:0003725: double-stranded RNA binding	1.08E-02
45	GO:0003774: motor activity	1.18E-02
46	GO:0016788: hydrolase activity, acting on ester bonds	1.18E-02
47	GO:0008146: sulfotransferase activity	1.28E-02
48	GO:0003712: transcription cofactor activity	1.28E-02
49	GO:0004190: aspartic-type endopeptidase activity	1.28E-02
50	GO:0016298: lipase activity	1.37E-02
51	GO:0031418: L-ascorbic acid binding	1.48E-02
52	GO:0005345: purine nucleobase transmembrane transporter activity	1.59E-02
53	GO:0004707: MAP kinase activity	1.70E-02
54	GO:0004176: ATP-dependent peptidase activity	1.70E-02
55	GO:0033612: receptor serine/threonine kinase binding	1.70E-02
56	GO:0008408: 3'-5' exonuclease activity	1.70E-02
57	GO:0016874: ligase activity	1.78E-02
58	GO:0003727: single-stranded RNA binding	2.05E-02
59	GO:0003723: RNA binding	2.12E-02
60	GO:0004812: aminoacyl-tRNA ligase activity	2.17E-02
61	GO:0004527: exonuclease activity	2.42E-02
62	GO:0005199: structural constituent of cell wall	2.42E-02
63	GO:0050662: coenzyme binding	2.54E-02
64	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.05E-02
65	GO:0000156: phosphorelay response regulator activity	3.08E-02
66	GO:0051015: actin filament binding	3.08E-02
67	GO:0016759: cellulose synthase activity	3.22E-02
68	GO:0008237: metallopeptidase activity	3.36E-02
69	GO:0005200: structural constituent of cytoskeleton	3.36E-02
70	GO:0102483: scopolin beta-glucosidase activity	4.10E-02
71	GO:0030247: polysaccharide binding	4.10E-02

Rank	GO Term	Adjusted P value
1	GO:0000796: condensin complex	2.82E-04
2	GO:0000427: plastid-encoded plastid RNA polymerase complex	6.19E-04
3	GO:0019897: extrinsic component of plasma membrane	1.00E-03
4	GO:0009317: acetyl-CoA carboxylase complex	1.00E-03
5	GO:0009654: photosystem II oxygen evolving complex	1.44E-03
6	GO:0009534: chloroplast thylakoid	1.56E-03
7	GO:0009544: chloroplast ATP synthase complex	1.92E-03
8	GO:0019898: extrinsic component of membrane	2.97E-03
9	GO:0016459: myosin complex	8.11E-03
10	GO:0005884: actin filament	8.97E-03
11	GO:0090404: pollen tube tip	8.97E-03
12	GO:0046658: anchored component of plasma membrane	9.44E-03
13	GO:0009508: plastid chromosome	1.08E-02
14	GO:0030095: chloroplast photosystem II	1.18E-02
15	GO:0015629: actin cytoskeleton	1.93E-02
16	GO:0005886: plasma membrane	2.82E-02
17	GO:0031225: anchored component of membrane	2.86E-02
18	GO:0009295: nucleoid	3.36E-02