Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G13790

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
2GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
3GO:0015690: aluminum cation transport0.00E+00
4GO:1900367: positive regulation of defense response to insect0.00E+00
5GO:0002764: immune response-regulating signaling pathway0.00E+00
6GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
7GO:0033587: shikimate biosynthetic process0.00E+00
8GO:0045730: respiratory burst0.00E+00
9GO:0010324: membrane invagination0.00E+00
10GO:0035264: multicellular organism growth0.00E+00
11GO:0032499: detection of peptidoglycan0.00E+00
12GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
13GO:0071327: cellular response to trehalose stimulus0.00E+00
14GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
15GO:0006468: protein phosphorylation4.13E-10
16GO:0010200: response to chitin1.27E-07
17GO:0031348: negative regulation of defense response2.19E-06
18GO:0080142: regulation of salicylic acid biosynthetic process2.25E-06
19GO:0006952: defense response2.94E-06
20GO:0009697: salicylic acid biosynthetic process4.96E-06
21GO:0019725: cellular homeostasis1.35E-05
22GO:0042742: defense response to bacterium4.84E-05
23GO:0071456: cellular response to hypoxia4.87E-05
24GO:0010150: leaf senescence5.54E-05
25GO:0045088: regulation of innate immune response1.66E-04
26GO:0060548: negative regulation of cell death1.66E-04
27GO:0006979: response to oxidative stress1.88E-04
28GO:0009266: response to temperature stimulus2.51E-04
29GO:0010225: response to UV-C2.52E-04
30GO:0009611: response to wounding2.64E-04
31GO:0009737: response to abscisic acid2.83E-04
32GO:0070588: calcium ion transmembrane transport2.94E-04
33GO:0009816: defense response to bacterium, incompatible interaction3.23E-04
34GO:0046777: protein autophosphorylation3.63E-04
35GO:0006470: protein dephosphorylation4.28E-04
36GO:0009626: plant-type hypersensitive response4.35E-04
37GO:0009620: response to fungus4.61E-04
38GO:0009617: response to bacterium4.68E-04
39GO:0019567: arabinose biosynthetic process5.57E-04
40GO:0015969: guanosine tetraphosphate metabolic process5.57E-04
41GO:0099132: ATP hydrolysis coupled cation transmembrane transport5.57E-04
42GO:0007229: integrin-mediated signaling pathway5.57E-04
43GO:0010941: regulation of cell death5.57E-04
44GO:0010421: hydrogen peroxide-mediated programmed cell death5.57E-04
45GO:1901183: positive regulation of camalexin biosynthetic process5.57E-04
46GO:0009270: response to humidity5.57E-04
47GO:0032491: detection of molecule of fungal origin5.57E-04
48GO:0006643: membrane lipid metabolic process5.57E-04
49GO:0042759: long-chain fatty acid biosynthetic process5.57E-04
50GO:0048508: embryonic meristem development5.57E-04
51GO:0010365: positive regulation of ethylene biosynthetic process5.57E-04
52GO:0051938: L-glutamate import5.57E-04
53GO:0015760: glucose-6-phosphate transport5.57E-04
54GO:0046256: 2,4,6-trinitrotoluene catabolic process5.57E-04
55GO:0046470: phosphatidylcholine metabolic process6.04E-04
56GO:0009751: response to salicylic acid7.31E-04
57GO:0042391: regulation of membrane potential8.71E-04
58GO:2000031: regulation of salicylic acid mediated signaling pathway9.15E-04
59GO:0051707: response to other organism9.64E-04
60GO:0009646: response to absence of light1.05E-03
61GO:0090333: regulation of stomatal closure1.09E-03
62GO:0010112: regulation of systemic acquired resistance1.09E-03
63GO:0009749: response to glucose1.14E-03
64GO:0010115: regulation of abscisic acid biosynthetic process1.20E-03
65GO:0015865: purine nucleotide transport1.20E-03
66GO:0010271: regulation of chlorophyll catabolic process1.20E-03
67GO:0044419: interspecies interaction between organisms1.20E-03
68GO:0009945: radial axis specification1.20E-03
69GO:0015712: hexose phosphate transport1.20E-03
70GO:0051258: protein polymerization1.20E-03
71GO:0002221: pattern recognition receptor signaling pathway1.20E-03
72GO:0043091: L-arginine import1.20E-03
73GO:0015914: phospholipid transport1.20E-03
74GO:0006123: mitochondrial electron transport, cytochrome c to oxygen1.20E-03
75GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.20E-03
76GO:0015802: basic amino acid transport1.20E-03
77GO:0010618: aerenchyma formation1.20E-03
78GO:0080181: lateral root branching1.20E-03
79GO:0006486: protein glycosylation1.52E-03
80GO:0007165: signal transduction1.77E-03
81GO:0015714: phosphoenolpyruvate transport1.97E-03
82GO:0048281: inflorescence morphogenesis1.97E-03
83GO:1900055: regulation of leaf senescence1.97E-03
84GO:0015695: organic cation transport1.97E-03
85GO:0006954: inflammatory response1.97E-03
86GO:0034051: negative regulation of plant-type hypersensitive response1.97E-03
87GO:0016045: detection of bacterium1.97E-03
88GO:0010498: proteasomal protein catabolic process1.97E-03
89GO:0010359: regulation of anion channel activity1.97E-03
90GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.97E-03
91GO:0035436: triose phosphate transmembrane transport1.97E-03
92GO:0051176: positive regulation of sulfur metabolic process1.97E-03
93GO:0045793: positive regulation of cell size1.97E-03
94GO:0010186: positive regulation of cellular defense response1.97E-03
95GO:0055046: microgametogenesis2.27E-03
96GO:0010306: rhamnogalacturonan II biosynthetic process2.86E-03
97GO:0046902: regulation of mitochondrial membrane permeability2.86E-03
98GO:0015696: ammonium transport2.86E-03
99GO:0009399: nitrogen fixation2.86E-03
100GO:0072583: clathrin-dependent endocytosis2.86E-03
101GO:0071323: cellular response to chitin2.86E-03
102GO:0046513: ceramide biosynthetic process2.86E-03
103GO:0002679: respiratory burst involved in defense response2.86E-03
104GO:0046836: glycolipid transport2.86E-03
105GO:0000187: activation of MAPK activity2.86E-03
106GO:0048194: Golgi vesicle budding2.86E-03
107GO:0010167: response to nitrate2.88E-03
108GO:0010119: regulation of stomatal movement3.38E-03
109GO:2000377: regulation of reactive oxygen species metabolic process3.56E-03
110GO:0009867: jasmonic acid mediated signaling pathway3.81E-03
111GO:0010107: potassium ion import3.85E-03
112GO:0071219: cellular response to molecule of bacterial origin3.85E-03
113GO:0072488: ammonium transmembrane transport3.85E-03
114GO:0033358: UDP-L-arabinose biosynthetic process3.85E-03
115GO:0010508: positive regulation of autophagy3.85E-03
116GO:0015713: phosphoglycerate transport3.85E-03
117GO:0006542: glutamine biosynthetic process3.85E-03
118GO:1901141: regulation of lignin biosynthetic process3.85E-03
119GO:0010109: regulation of photosynthesis3.85E-03
120GO:0045227: capsule polysaccharide biosynthetic process3.85E-03
121GO:0046345: abscisic acid catabolic process3.85E-03
122GO:0010483: pollen tube reception3.85E-03
123GO:0009652: thigmotropism3.85E-03
124GO:0010017: red or far-red light signaling pathway4.74E-03
125GO:0016226: iron-sulfur cluster assembly4.74E-03
126GO:0034052: positive regulation of plant-type hypersensitive response4.94E-03
127GO:0009164: nucleoside catabolic process4.94E-03
128GO:0010117: photoprotection4.94E-03
129GO:0018344: protein geranylgeranylation4.94E-03
130GO:0050832: defense response to fungus4.99E-03
131GO:0009625: response to insect5.18E-03
132GO:0009744: response to sucrose5.27E-03
133GO:1900425: negative regulation of defense response to bacterium6.12E-03
134GO:0002238: response to molecule of fungal origin6.12E-03
135GO:0009643: photosynthetic acclimation6.12E-03
136GO:0018258: protein O-linked glycosylation via hydroxyproline6.12E-03
137GO:0010942: positive regulation of cell death6.12E-03
138GO:0010405: arabinogalactan protein metabolic process6.12E-03
139GO:0010118: stomatal movement6.61E-03
140GO:0042372: phylloquinone biosynthetic process7.40E-03
141GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response7.40E-03
142GO:0009612: response to mechanical stimulus7.40E-03
143GO:0009942: longitudinal axis specification7.40E-03
144GO:0009423: chorismate biosynthetic process7.40E-03
145GO:0010555: response to mannitol7.40E-03
146GO:2000037: regulation of stomatal complex patterning7.40E-03
147GO:0010310: regulation of hydrogen peroxide metabolic process7.40E-03
148GO:2000067: regulation of root morphogenesis7.40E-03
149GO:0009809: lignin biosynthetic process7.72E-03
150GO:1900056: negative regulation of leaf senescence8.76E-03
151GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c8.76E-03
152GO:0050829: defense response to Gram-negative bacterium8.76E-03
153GO:0010044: response to aluminum ion8.76E-03
154GO:0010161: red light signaling pathway8.76E-03
155GO:0098869: cellular oxidant detoxification8.76E-03
156GO:0071446: cellular response to salicylic acid stimulus8.76E-03
157GO:0010193: response to ozone8.82E-03
158GO:0009409: response to cold9.26E-03
159GO:0030091: protein repair1.02E-02
160GO:0009787: regulation of abscisic acid-activated signaling pathway1.02E-02
161GO:0009819: drought recovery1.02E-02
162GO:0009414: response to water deprivation1.16E-02
163GO:0007186: G-protein coupled receptor signaling pathway1.17E-02
164GO:0010204: defense response signaling pathway, resistance gene-independent1.17E-02
165GO:0030968: endoplasmic reticulum unfolded protein response1.17E-02
166GO:0009808: lignin metabolic process1.17E-02
167GO:0010099: regulation of photomorphogenesis1.17E-02
168GO:0009624: response to nematode1.21E-02
169GO:0016567: protein ubiquitination1.21E-02
170GO:0001666: response to hypoxia1.28E-02
171GO:0051865: protein autoubiquitination1.33E-02
172GO:0009051: pentose-phosphate shunt, oxidative branch1.33E-02
173GO:0006098: pentose-phosphate shunt1.33E-02
174GO:0046916: cellular transition metal ion homeostasis1.33E-02
175GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.36E-02
176GO:0009627: systemic acquired resistance1.43E-02
177GO:0042128: nitrate assimilation1.43E-02
178GO:0048354: mucilage biosynthetic process involved in seed coat development1.50E-02
179GO:0010380: regulation of chlorophyll biosynthetic process1.50E-02
180GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.50E-02
181GO:0008202: steroid metabolic process1.50E-02
182GO:1900426: positive regulation of defense response to bacterium1.50E-02
183GO:0006950: response to stress1.51E-02
184GO:0007064: mitotic sister chromatid cohesion1.68E-02
185GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.71E-02
186GO:0009832: plant-type cell wall biogenesis1.76E-02
187GO:0010311: lateral root formation1.76E-02
188GO:0009407: toxin catabolic process1.85E-02
189GO:0009073: aromatic amino acid family biosynthetic process1.86E-02
190GO:0009750: response to fructose1.86E-02
191GO:0007568: aging1.94E-02
192GO:0012501: programmed cell death2.05E-02
193GO:0015706: nitrate transport2.05E-02
194GO:0002213: defense response to insect2.05E-02
195GO:0010105: negative regulation of ethylene-activated signaling pathway2.05E-02
196GO:0006890: retrograde vesicle-mediated transport, Golgi to ER2.05E-02
197GO:0008361: regulation of cell size2.05E-02
198GO:0045087: innate immune response2.13E-02
199GO:0009785: blue light signaling pathway2.24E-02
200GO:0006006: glucose metabolic process2.24E-02
201GO:0010229: inflorescence development2.24E-02
202GO:0009738: abscisic acid-activated signaling pathway2.27E-02
203GO:0007034: vacuolar transport2.44E-02
204GO:0002237: response to molecule of bacterial origin2.44E-02
205GO:0010540: basipetal auxin transport2.44E-02
206GO:0035556: intracellular signal transduction2.63E-02
207GO:0046854: phosphatidylinositol phosphorylation2.65E-02
208GO:0009969: xyloglucan biosynthetic process2.65E-02
209GO:0009225: nucleotide-sugar metabolic process2.65E-02
210GO:0016042: lipid catabolic process2.78E-02
211GO:0007166: cell surface receptor signaling pathway2.87E-02
212GO:0009863: salicylic acid mediated signaling pathway3.08E-02
213GO:0006487: protein N-linked glycosylation3.08E-02
214GO:0009636: response to toxic substance3.09E-02
215GO:0006855: drug transmembrane transport3.21E-02
216GO:0009695: jasmonic acid biosynthetic process3.31E-02
217GO:0016310: phosphorylation3.53E-02
218GO:0009269: response to desiccation3.54E-02
219GO:0003333: amino acid transmembrane transport3.54E-02
220GO:0048511: rhythmic process3.54E-02
221GO:0009814: defense response, incompatible interaction3.78E-02
222GO:2000022: regulation of jasmonic acid mediated signaling pathway3.78E-02
223GO:0010227: floral organ abscission4.02E-02
224GO:0006012: galactose metabolic process4.02E-02
225GO:0009909: regulation of flower development4.10E-02
226GO:0019722: calcium-mediated signaling4.26E-02
227GO:0009561: megagametogenesis4.26E-02
228GO:0070417: cellular response to cold4.51E-02
229GO:0042147: retrograde transport, endosome to Golgi4.51E-02
230GO:0042631: cellular response to water deprivation4.77E-02
231GO:0000271: polysaccharide biosynthetic process4.77E-02
RankGO TermAdjusted P value
1GO:2001080: chitosan binding0.00E+00
2GO:0004107: chorismate synthase activity0.00E+00
3GO:0004168: dolichol kinase activity0.00E+00
4GO:0016301: kinase activity2.55E-11
5GO:0004674: protein serine/threonine kinase activity8.27E-11
6GO:0005524: ATP binding1.76E-07
7GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.96E-06
8GO:0005509: calcium ion binding3.42E-05
9GO:0019199: transmembrane receptor protein kinase activity1.66E-04
10GO:0005388: calcium-transporting ATPase activity2.11E-04
11GO:0030552: cAMP binding2.94E-04
12GO:0030553: cGMP binding2.94E-04
13GO:0005216: ion channel activity4.48E-04
14GO:0004012: phospholipid-translocating ATPase activity4.72E-04
15GO:0004662: CAAX-protein geranylgeranyltransferase activity5.57E-04
16GO:0015085: calcium ion transmembrane transporter activity5.57E-04
17GO:0008909: isochorismate synthase activity5.57E-04
18GO:0019707: protein-cysteine S-acyltransferase activity5.57E-04
19GO:0031127: alpha-(1,2)-fucosyltransferase activity5.57E-04
20GO:0032050: clathrin heavy chain binding5.57E-04
21GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity5.57E-04
22GO:0030551: cyclic nucleotide binding8.71E-04
23GO:0005249: voltage-gated potassium channel activity8.71E-04
24GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity9.15E-04
25GO:0004630: phospholipase D activity9.15E-04
26GO:0043531: ADP binding9.52E-04
27GO:0019901: protein kinase binding1.14E-03
28GO:0005515: protein binding1.19E-03
29GO:0015152: glucose-6-phosphate transmembrane transporter activity1.20E-03
30GO:0022821: potassium ion antiporter activity1.20E-03
31GO:0001671: ATPase activator activity1.20E-03
32GO:0008728: GTP diphosphokinase activity1.20E-03
33GO:0048531: beta-1,3-galactosyltransferase activity1.20E-03
34GO:0050291: sphingosine N-acyltransferase activity1.20E-03
35GO:0047364: desulfoglucosinolate sulfotransferase activity1.20E-03
36GO:0004842: ubiquitin-protein transferase activity1.42E-03
37GO:0008171: O-methyltransferase activity1.51E-03
38GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.72E-03
39GO:0008559: xenobiotic-transporting ATPase activity1.74E-03
40GO:0042409: caffeoyl-CoA O-methyltransferase activity1.97E-03
41GO:0046423: allene-oxide cyclase activity1.97E-03
42GO:0031683: G-protein beta/gamma-subunit complex binding1.97E-03
43GO:0016595: glutamate binding1.97E-03
44GO:0071917: triose-phosphate transmembrane transporter activity1.97E-03
45GO:0001664: G-protein coupled receptor binding1.97E-03
46GO:0004722: protein serine/threonine phosphatase activity2.09E-03
47GO:0005516: calmodulin binding2.25E-03
48GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.27E-03
49GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity2.86E-03
50GO:0015181: arginine transmembrane transporter activity2.86E-03
51GO:0015189: L-lysine transmembrane transporter activity2.86E-03
52GO:0017089: glycolipid transporter activity2.86E-03
53GO:0004190: aspartic-type endopeptidase activity2.88E-03
54GO:0005313: L-glutamate transmembrane transporter activity3.85E-03
55GO:0015120: phosphoglycerate transmembrane transporter activity3.85E-03
56GO:0050373: UDP-arabinose 4-epimerase activity3.85E-03
57GO:0004345: glucose-6-phosphate dehydrogenase activity3.85E-03
58GO:0051861: glycolipid binding3.85E-03
59GO:0043424: protein histidine kinase binding3.93E-03
60GO:0019706: protein-cysteine S-palmitoyltransferase activity4.33E-03
61GO:0004672: protein kinase activity4.41E-03
62GO:0005546: phosphatidylinositol-4,5-bisphosphate binding4.94E-03
63GO:0047631: ADP-ribose diphosphatase activity4.94E-03
64GO:0005471: ATP:ADP antiporter activity4.94E-03
65GO:0004356: glutamate-ammonia ligase activity4.94E-03
66GO:0045431: flavonol synthase activity4.94E-03
67GO:0010294: abscisic acid glucosyltransferase activity4.94E-03
68GO:0046872: metal ion binding5.12E-03
69GO:0000210: NAD+ diphosphatase activity6.12E-03
70GO:0035252: UDP-xylosyltransferase activity6.12E-03
71GO:0008519: ammonium transmembrane transporter activity6.12E-03
72GO:0004605: phosphatidate cytidylyltransferase activity6.12E-03
73GO:1990714: hydroxyproline O-galactosyltransferase activity6.12E-03
74GO:0033743: peptide-methionine (R)-S-oxide reductase activity7.40E-03
75GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides7.40E-03
76GO:0005261: cation channel activity7.40E-03
77GO:0003978: UDP-glucose 4-epimerase activity7.40E-03
78GO:0019900: kinase binding7.40E-03
79GO:0010181: FMN binding7.67E-03
80GO:0016298: lipase activity8.07E-03
81GO:0043295: glutathione binding8.76E-03
82GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity8.76E-03
83GO:0005544: calcium-dependent phospholipid binding1.02E-02
84GO:0004708: MAP kinase kinase activity1.02E-02
85GO:0004430: 1-phosphatidylinositol 4-kinase activity1.17E-02
86GO:0008142: oxysterol binding1.17E-02
87GO:0071949: FAD binding1.33E-02
88GO:0008417: fucosyltransferase activity1.33E-02
89GO:0008375: acetylglucosaminyltransferase activity1.43E-02
90GO:0030246: carbohydrate binding1.45E-02
91GO:0015174: basic amino acid transmembrane transporter activity1.50E-02
92GO:0015112: nitrate transmembrane transporter activity1.50E-02
93GO:0004721: phosphoprotein phosphatase activity1.51E-02
94GO:0004806: triglyceride lipase activity1.51E-02
95GO:0004713: protein tyrosine kinase activity1.68E-02
96GO:0004568: chitinase activity1.68E-02
97GO:0008047: enzyme activator activity1.68E-02
98GO:0015238: drug transmembrane transporter activity1.76E-02
99GO:0005543: phospholipid binding1.86E-02
100GO:0008378: galactosyltransferase activity2.05E-02
101GO:0004521: endoribonuclease activity2.05E-02
102GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.22E-02
103GO:0005315: inorganic phosphate transmembrane transporter activity2.24E-02
104GO:0015095: magnesium ion transmembrane transporter activity2.24E-02
105GO:0015297: antiporter activity2.29E-02
106GO:0050661: NADP binding2.43E-02
107GO:0004364: glutathione transferase activity2.64E-02
108GO:0008061: chitin binding2.65E-02
109GO:0008146: sulfotransferase activity2.65E-02
110GO:0003924: GTPase activity2.90E-02
111GO:0003954: NADH dehydrogenase activity3.08E-02
112GO:0009055: electron carrier activity3.21E-02
113GO:0051087: chaperone binding3.31E-02
114GO:0004707: MAP kinase activity3.54E-02
115GO:0033612: receptor serine/threonine kinase binding3.54E-02
116GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.78E-02
117GO:0004499: N,N-dimethylaniline monooxygenase activity4.26E-02
118GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups4.51E-02
119GO:0005451: monovalent cation:proton antiporter activity4.77E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane4.36E-15
2GO:0016021: integral component of membrane5.59E-07
3GO:0005901: caveola1.35E-05
4GO:0005953: CAAX-protein geranylgeranyltransferase complex5.57E-04
5GO:0000138: Golgi trans cisterna5.57E-04
6GO:0031304: intrinsic component of mitochondrial inner membrane1.20E-03
7GO:0005887: integral component of plasma membrane1.47E-03
8GO:0042406: extrinsic component of endoplasmic reticulum membrane1.97E-03
9GO:0008287: protein serine/threonine phosphatase complex1.97E-03
10GO:0030139: endocytic vesicle1.97E-03
11GO:0070062: extracellular exosome2.86E-03
12GO:0005769: early endosome3.21E-03
13GO:0005758: mitochondrial intermembrane space3.56E-03
14GO:0005794: Golgi apparatus4.05E-03
15GO:0005774: vacuolar membrane7.73E-03
16GO:0032580: Golgi cisterna membrane1.07E-02
17GO:0005737: cytoplasm1.67E-02
18GO:0030125: clathrin vesicle coat1.68E-02
19GO:0005740: mitochondrial envelope1.68E-02
20GO:0000325: plant-type vacuole1.94E-02
21GO:0031012: extracellular matrix2.24E-02
22GO:0031902: late endosome membrane2.54E-02
23GO:0030176: integral component of endoplasmic reticulum membrane2.65E-02
24GO:0070469: respiratory chain3.31E-02
25GO:0016020: membrane4.34E-02
26GO:0005834: heterotrimeric G-protein complex4.66E-02
27GO:0009506: plasmodesma4.93E-02
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Gene type



Gene DE type