GO Enrichment Analysis of Co-expressed Genes with
AT2G10940
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 3 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 4 | GO:0032544: plastid translation | 6.65E-06 |
| 5 | GO:0010198: synergid death | 5.64E-05 |
| 6 | GO:0006412: translation | 9.29E-05 |
| 7 | GO:0090391: granum assembly | 9.94E-05 |
| 8 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.49E-04 |
| 9 | GO:0006546: glycine catabolic process | 2.04E-04 |
| 10 | GO:0019464: glycine decarboxylation via glycine cleavage system | 2.04E-04 |
| 11 | GO:0045727: positive regulation of translation | 2.04E-04 |
| 12 | GO:0015979: photosynthesis | 2.32E-04 |
| 13 | GO:0010236: plastoquinone biosynthetic process | 2.62E-04 |
| 14 | GO:0006751: glutathione catabolic process | 3.24E-04 |
| 15 | GO:0042549: photosystem II stabilization | 3.24E-04 |
| 16 | GO:0010114: response to red light | 3.49E-04 |
| 17 | GO:0010189: vitamin E biosynthetic process | 3.89E-04 |
| 18 | GO:0010555: response to mannitol | 3.89E-04 |
| 19 | GO:0009642: response to light intensity | 5.25E-04 |
| 20 | GO:0009657: plastid organization | 5.98E-04 |
| 21 | GO:0000272: polysaccharide catabolic process | 9.07E-04 |
| 22 | GO:0018119: peptidyl-cysteine S-nitrosylation | 9.07E-04 |
| 23 | GO:0009773: photosynthetic electron transport in photosystem I | 9.07E-04 |
| 24 | GO:0010207: photosystem II assembly | 1.16E-03 |
| 25 | GO:0019344: cysteine biosynthetic process | 1.43E-03 |
| 26 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.53E-03 |
| 27 | GO:0042254: ribosome biogenesis | 1.71E-03 |
| 28 | GO:0000413: protein peptidyl-prolyl isomerization | 2.15E-03 |
| 29 | GO:0042631: cellular response to water deprivation | 2.15E-03 |
| 30 | GO:0042128: nitrate assimilation | 3.60E-03 |
| 31 | GO:0018298: protein-chromophore linkage | 4.00E-03 |
| 32 | GO:0009817: defense response to fungus, incompatible interaction | 4.00E-03 |
| 33 | GO:0010218: response to far red light | 4.28E-03 |
| 34 | GO:0009637: response to blue light | 4.70E-03 |
| 35 | GO:0009735: response to cytokinin | 4.88E-03 |
| 36 | GO:0009664: plant-type cell wall organization | 6.55E-03 |
| 37 | GO:0006364: rRNA processing | 6.88E-03 |
| 38 | GO:0051603: proteolysis involved in cellular protein catabolic process | 7.05E-03 |
| 39 | GO:0006417: regulation of translation | 7.38E-03 |
| 40 | GO:0009740: gibberellic acid mediated signaling pathway | 8.43E-03 |
| 41 | GO:0006396: RNA processing | 8.97E-03 |
| 42 | GO:0009742: brassinosteroid mediated signaling pathway | 9.16E-03 |
| 43 | GO:0042742: defense response to bacterium | 1.08E-02 |
| 44 | GO:0006633: fatty acid biosynthetic process | 1.21E-02 |
| 45 | GO:0007623: circadian rhythm | 1.29E-02 |
| 46 | GO:0009739: response to gibberellin | 1.40E-02 |
| 47 | GO:0010468: regulation of gene expression | 1.46E-02 |
| 48 | GO:0006810: transport | 1.59E-02 |
| 49 | GO:0009658: chloroplast organization | 1.76E-02 |
| 50 | GO:0080167: response to karrikin | 2.05E-02 |
| 51 | GO:0045454: cell redox homeostasis | 2.33E-02 |
| 52 | GO:0032259: methylation | 2.62E-02 |
| 53 | GO:0016042: lipid catabolic process | 2.65E-02 |
| 54 | GO:0006629: lipid metabolic process | 2.71E-02 |
| 55 | GO:0006397: mRNA processing | 2.79E-02 |
| 56 | GO:0009611: response to wounding | 4.14E-02 |
| 57 | GO:0045893: positive regulation of transcription, DNA-templated | 4.49E-02 |
| 58 | GO:0006457: protein folding | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 2 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 3 | GO:0019843: rRNA binding | 2.30E-10 |
| 4 | GO:0003735: structural constituent of ribosome | 7.35E-06 |
| 5 | GO:0009374: biotin binding | 2.19E-05 |
| 6 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 2.19E-05 |
| 7 | GO:0010297: heteropolysaccharide binding | 5.64E-05 |
| 8 | GO:0003839: gamma-glutamylcyclotransferase activity | 5.64E-05 |
| 9 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.49E-04 |
| 10 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 2.04E-04 |
| 11 | GO:0003989: acetyl-CoA carboxylase activity | 2.62E-04 |
| 12 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.77E-04 |
| 13 | GO:0047372: acylglycerol lipase activity | 9.07E-04 |
| 14 | GO:0031409: pigment binding | 1.34E-03 |
| 15 | GO:0003727: single-stranded RNA binding | 1.94E-03 |
| 16 | GO:0050662: coenzyme binding | 2.38E-03 |
| 17 | GO:0048038: quinone binding | 2.61E-03 |
| 18 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 3.09E-03 |
| 19 | GO:0016168: chlorophyll binding | 3.47E-03 |
| 20 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 3.87E-03 |
| 21 | GO:0004185: serine-type carboxypeptidase activity | 5.60E-03 |
| 22 | GO:0043621: protein self-association | 5.91E-03 |
| 23 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.23E-03 |
| 24 | GO:0003690: double-stranded DNA binding | 7.05E-03 |
| 25 | GO:0030599: pectinesterase activity | 8.43E-03 |
| 26 | GO:0003824: catalytic activity | 1.19E-02 |
| 27 | GO:0008168: methyltransferase activity | 1.71E-02 |
| 28 | GO:0016788: hydrolase activity, acting on ester bonds | 1.78E-02 |
| 29 | GO:0052689: carboxylic ester hydrolase activity | 2.20E-02 |
| 30 | GO:0009055: electron carrier activity | 2.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009941: chloroplast envelope | 2.42E-15 |
| 2 | GO:0009507: chloroplast | 7.34E-14 |
| 3 | GO:0009570: chloroplast stroma | 3.72E-10 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 2.92E-08 |
| 5 | GO:0005840: ribosome | 1.12E-06 |
| 6 | GO:0009579: thylakoid | 5.20E-06 |
| 7 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 8.46E-06 |
| 8 | GO:0009654: photosystem II oxygen evolving complex | 4.24E-05 |
| 9 | GO:0010287: plastoglobule | 4.28E-05 |
| 10 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 5.64E-05 |
| 11 | GO:0009317: acetyl-CoA carboxylase complex | 9.94E-05 |
| 12 | GO:0005960: glycine cleavage complex | 1.49E-04 |
| 13 | GO:0031977: thylakoid lumen | 3.21E-04 |
| 14 | GO:0009539: photosystem II reaction center | 5.98E-04 |
| 15 | GO:0009706: chloroplast inner membrane | 6.56E-04 |
| 16 | GO:0009534: chloroplast thylakoid | 8.51E-04 |
| 17 | GO:0000312: plastid small ribosomal subunit | 1.16E-03 |
| 18 | GO:0030095: chloroplast photosystem II | 1.16E-03 |
| 19 | GO:0030076: light-harvesting complex | 1.25E-03 |
| 20 | GO:0009522: photosystem I | 2.38E-03 |
| 21 | GO:0009523: photosystem II | 2.49E-03 |
| 22 | GO:0019898: extrinsic component of membrane | 2.49E-03 |
| 23 | GO:0010319: stromule | 3.09E-03 |
| 24 | GO:0015934: large ribosomal subunit | 4.42E-03 |
| 25 | GO:0048046: apoplast | 8.22E-03 |
| 26 | GO:0009543: chloroplast thylakoid lumen | 1.03E-02 |
| 27 | GO:0009536: plastid | 1.33E-02 |
| 28 | GO:0005615: extracellular space | 1.40E-02 |
| 29 | GO:0022627: cytosolic small ribosomal subunit | 1.58E-02 |
| 30 | GO:0031969: chloroplast membrane | 2.05E-02 |
| 31 | GO:0016020: membrane | 3.20E-02 |
| 32 | GO:0022626: cytosolic ribosome | 3.95E-02 |
| 33 | GO:0005618: cell wall | 4.29E-02 |
| 34 | GO:0005777: peroxisome | 4.49E-02 |