Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G05940

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
2GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
3GO:0006983: ER overload response0.00E+00
4GO:0032515: negative regulation of phosphoprotein phosphatase activity0.00E+00
5GO:0046865: terpenoid transport0.00E+00
6GO:1902009: positive regulation of toxin transport0.00E+00
7GO:0010324: membrane invagination0.00E+00
8GO:0010055: atrichoblast differentiation0.00E+00
9GO:0006654: phosphatidic acid biosynthetic process0.00E+00
10GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
11GO:1902001: fatty acid transmembrane transport0.00E+00
12GO:1902289: negative regulation of defense response to oomycetes0.00E+00
13GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
14GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
15GO:0009312: oligosaccharide biosynthetic process0.00E+00
16GO:0071456: cellular response to hypoxia1.16E-06
17GO:0002237: response to molecule of bacterial origin8.14E-06
18GO:0009751: response to salicylic acid9.29E-05
19GO:0051707: response to other organism9.37E-05
20GO:0010200: response to chitin1.85E-04
21GO:0009643: photosynthetic acclimation2.78E-04
22GO:0009863: salicylic acid mediated signaling pathway2.86E-04
23GO:0033306: phytol metabolic process4.76E-04
24GO:0032469: endoplasmic reticulum calcium ion homeostasis4.76E-04
25GO:0050691: regulation of defense response to virus by host4.76E-04
26GO:0032491: detection of molecule of fungal origin4.76E-04
27GO:0009968: negative regulation of signal transduction4.76E-04
28GO:1990542: mitochondrial transmembrane transport4.76E-04
29GO:0032107: regulation of response to nutrient levels4.76E-04
30GO:0034975: protein folding in endoplasmic reticulum4.76E-04
31GO:0015760: glucose-6-phosphate transport4.76E-04
32GO:0043547: positive regulation of GTPase activity4.76E-04
33GO:1990641: response to iron ion starvation4.76E-04
34GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.76E-04
35GO:0010204: defense response signaling pathway, resistance gene-independent7.27E-04
36GO:0010112: regulation of systemic acquired resistance8.70E-04
37GO:0042742: defense response to bacterium8.73E-04
38GO:0010115: regulation of abscisic acid biosynthetic process1.02E-03
39GO:0006101: citrate metabolic process1.02E-03
40GO:0043066: negative regulation of apoptotic process1.02E-03
41GO:0015865: purine nucleotide transport1.02E-03
42GO:0015908: fatty acid transport1.02E-03
43GO:0002240: response to molecule of oomycetes origin1.02E-03
44GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.02E-03
45GO:0044419: interspecies interaction between organisms1.02E-03
46GO:0010271: regulation of chlorophyll catabolic process1.02E-03
47GO:0015712: hexose phosphate transport1.02E-03
48GO:0051258: protein polymerization1.02E-03
49GO:0015012: heparan sulfate proteoglycan biosynthetic process1.02E-03
50GO:0071668: plant-type cell wall assembly1.02E-03
51GO:0080183: response to photooxidative stress1.02E-03
52GO:0010155: regulation of proton transport1.02E-03
53GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.02E-03
54GO:0009838: abscission1.02E-03
55GO:0080181: lateral root branching1.02E-03
56GO:0006024: glycosaminoglycan biosynthetic process1.02E-03
57GO:0055088: lipid homeostasis1.02E-03
58GO:0009870: defense response signaling pathway, resistance gene-dependent1.19E-03
59GO:0006952: defense response1.35E-03
60GO:0006954: inflammatory response1.67E-03
61GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1.67E-03
62GO:0080163: regulation of protein serine/threonine phosphatase activity1.67E-03
63GO:0035436: triose phosphate transmembrane transport1.67E-03
64GO:0071398: cellular response to fatty acid1.67E-03
65GO:0006065: UDP-glucuronate biosynthetic process1.67E-03
66GO:0015783: GDP-fucose transport1.67E-03
67GO:0009410: response to xenobiotic stimulus1.67E-03
68GO:0015692: lead ion transport1.67E-03
69GO:0052546: cell wall pectin metabolic process1.67E-03
70GO:0015695: organic cation transport1.67E-03
71GO:0015714: phosphoenolpyruvate transport1.67E-03
72GO:0080168: abscisic acid transport1.67E-03
73GO:0009737: response to abscisic acid2.39E-03
74GO:0010731: protein glutathionylation2.42E-03
75GO:0015696: ammonium transport2.42E-03
76GO:0071323: cellular response to chitin2.42E-03
77GO:0055070: copper ion homeostasis2.42E-03
78GO:0010116: positive regulation of abscisic acid biosynthetic process2.42E-03
79GO:0046902: regulation of mitochondrial membrane permeability2.42E-03
80GO:0080147: root hair cell development2.80E-03
81GO:0015713: phosphoglycerate transport3.26E-03
82GO:0010109: regulation of photosynthesis3.26E-03
83GO:0045227: capsule polysaccharide biosynthetic process3.26E-03
84GO:0045088: regulation of innate immune response3.26E-03
85GO:0072488: ammonium transmembrane transport3.26E-03
86GO:0033358: UDP-L-arabinose biosynthetic process3.26E-03
87GO:0009814: defense response, incompatible interaction3.72E-03
88GO:0006012: galactose metabolic process4.06E-03
89GO:0010150: leaf senescence4.17E-03
90GO:0034052: positive regulation of plant-type hypersensitive response4.18E-03
91GO:0006097: glyoxylate cycle4.18E-03
92GO:0009229: thiamine diphosphate biosynthetic process4.18E-03
93GO:0009435: NAD biosynthetic process4.18E-03
94GO:0018344: protein geranylgeranylation4.18E-03
95GO:0009247: glycolipid biosynthetic process4.18E-03
96GO:0009306: protein secretion4.42E-03
97GO:0009636: response to toxic substance4.49E-03
98GO:0015031: protein transport4.51E-03
99GO:0007166: cell surface receptor signaling pathway5.11E-03
100GO:1900425: negative regulation of defense response to bacterium5.18E-03
101GO:0033365: protein localization to organelle5.18E-03
102GO:0006574: valine catabolic process5.18E-03
103GO:0009228: thiamine biosynthetic process5.18E-03
104GO:0002238: response to molecule of fungal origin5.18E-03
105GO:0009759: indole glucosinolate biosynthetic process5.18E-03
106GO:0010256: endomembrane system organization5.18E-03
107GO:0045926: negative regulation of growth6.24E-03
108GO:0031930: mitochondria-nucleus signaling pathway6.24E-03
109GO:0009861: jasmonic acid and ethylene-dependent systemic resistance6.24E-03
110GO:0009749: response to glucose6.45E-03
111GO:0009414: response to water deprivation6.90E-03
112GO:0010193: response to ozone6.91E-03
113GO:1900057: positive regulation of leaf senescence7.39E-03
114GO:0000122: negative regulation of transcription from RNA polymerase II promoter7.39E-03
115GO:1902074: response to salt7.39E-03
116GO:0010044: response to aluminum ion7.39E-03
117GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway7.39E-03
118GO:0046470: phosphatidylcholine metabolic process7.39E-03
119GO:1900056: negative regulation of leaf senescence7.39E-03
120GO:0006979: response to oxidative stress7.39E-03
121GO:0009626: plant-type hypersensitive response7.61E-03
122GO:0006464: cellular protein modification process8.39E-03
123GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline8.60E-03
124GO:0009819: drought recovery8.60E-03
125GO:0009850: auxin metabolic process8.60E-03
126GO:0006605: protein targeting8.60E-03
127GO:0019375: galactolipid biosynthetic process8.60E-03
128GO:0031540: regulation of anthocyanin biosynthetic process8.60E-03
129GO:0006102: isocitrate metabolic process8.60E-03
130GO:0006904: vesicle docking involved in exocytosis8.92E-03
131GO:0010120: camalexin biosynthetic process9.88E-03
132GO:0010208: pollen wall assembly9.88E-03
133GO:0010029: regulation of seed germination1.06E-02
134GO:0009816: defense response to bacterium, incompatible interaction1.06E-02
135GO:0006098: pentose-phosphate shunt1.12E-02
136GO:0019432: triglyceride biosynthetic process1.12E-02
137GO:0015780: nucleotide-sugar transport1.12E-02
138GO:0009835: fruit ripening1.12E-02
139GO:0007338: single fertilization1.12E-02
140GO:0009086: methionine biosynthetic process1.26E-02
141GO:0010380: regulation of chlorophyll biosynthetic process1.26E-02
142GO:0008202: steroid metabolic process1.26E-02
143GO:0043067: regulation of programmed cell death1.26E-02
144GO:0006032: chitin catabolic process1.41E-02
145GO:0043069: negative regulation of programmed cell death1.41E-02
146GO:0010629: negative regulation of gene expression1.41E-02
147GO:0051555: flavonol biosynthetic process1.41E-02
148GO:0009407: toxin catabolic process1.45E-02
149GO:0009089: lysine biosynthetic process via diaminopimelate1.56E-02
150GO:0009684: indoleacetic acid biosynthetic process1.56E-02
151GO:0000038: very long-chain fatty acid metabolic process1.56E-02
152GO:0019684: photosynthesis, light reaction1.56E-02
153GO:0045087: innate immune response1.67E-02
154GO:0009867: jasmonic acid mediated signaling pathway1.67E-02
155GO:0045037: protein import into chloroplast stroma1.72E-02
156GO:0000266: mitochondrial fission1.72E-02
157GO:2000012: regulation of auxin polar transport1.88E-02
158GO:0010102: lateral root morphogenesis1.88E-02
159GO:0018107: peptidyl-threonine phosphorylation1.88E-02
160GO:0006829: zinc II ion transport1.88E-02
161GO:0006887: exocytosis1.99E-02
162GO:0006897: endocytosis1.99E-02
163GO:0006631: fatty acid metabolic process1.99E-02
164GO:0006470: protein dephosphorylation2.12E-02
165GO:0046688: response to copper ion2.23E-02
166GO:0009617: response to bacterium2.23E-02
167GO:0070588: calcium ion transmembrane transport2.23E-02
168GO:0009225: nucleotide-sugar metabolic process2.23E-02
169GO:0009753: response to jasmonic acid2.25E-02
170GO:0055085: transmembrane transport2.38E-02
171GO:0000162: tryptophan biosynthetic process2.41E-02
172GO:0006855: drug transmembrane transport2.52E-02
173GO:0000027: ribosomal large subunit assembly2.59E-02
174GO:0030150: protein import into mitochondrial matrix2.59E-02
175GO:0045333: cellular respiration2.59E-02
176GO:0006289: nucleotide-excision repair2.59E-02
177GO:2000377: regulation of reactive oxygen species metabolic process2.59E-02
178GO:0031347: regulation of defense response2.61E-02
179GO:0006812: cation transport2.71E-02
180GO:0042538: hyperosmotic salinity response2.71E-02
181GO:0006825: copper ion transport2.78E-02
182GO:0006486: protein glycosylation2.91E-02
183GO:0016998: cell wall macromolecule catabolic process2.97E-02
184GO:0006334: nucleosome assembly2.97E-02
185GO:0009269: response to desiccation2.97E-02
186GO:0010224: response to UV-B3.01E-02
187GO:0050832: defense response to fungus3.14E-02
188GO:0031348: negative regulation of defense response3.17E-02
189GO:0009693: ethylene biosynthetic process3.37E-02
190GO:0042127: regulation of cell proliferation3.58E-02
191GO:0009723: response to ethylene3.71E-02
192GO:0009620: response to fungus3.77E-02
193GO:0000271: polysaccharide biosynthetic process4.01E-02
194GO:0042391: regulation of membrane potential4.01E-02
195GO:0080167: response to karrikin4.04E-02
196GO:0006810: transport4.06E-02
197GO:0009624: response to nematode4.13E-02
198GO:0045489: pectin biosynthetic process4.23E-02
199GO:0010182: sugar mediated signaling pathway4.23E-02
200GO:0006885: regulation of pH4.23E-02
201GO:0018105: peptidyl-serine phosphorylation4.25E-02
202GO:0009738: abscisic acid-activated signaling pathway4.46E-02
203GO:0015979: photosynthesis4.74E-02
204GO:0009611: response to wounding4.82E-02
205GO:0071554: cell wall organization or biogenesis4.91E-02
206GO:0002229: defense response to oomycetes4.91E-02
RankGO TermAdjusted P value
1GO:0050334: thiaminase activity0.00E+00
2GO:0004865: protein serine/threonine phosphatase inhibitor activity0.00E+00
3GO:0005212: structural constituent of eye lens0.00E+00
4GO:0034338: short-chain carboxylesterase activity0.00E+00
5GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
6GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
7GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
8GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
9GO:0008734: L-aspartate oxidase activity0.00E+00
10GO:0003978: UDP-glucose 4-epimerase activity3.72E-04
11GO:0047150: betaine-homocysteine S-methyltransferase activity4.76E-04
12GO:2001147: camalexin binding4.76E-04
13GO:0046481: digalactosyldiacylglycerol synthase activity4.76E-04
14GO:0015245: fatty acid transporter activity4.76E-04
15GO:0010285: L,L-diaminopimelate aminotransferase activity4.76E-04
16GO:0016920: pyroglutamyl-peptidase activity4.76E-04
17GO:2001227: quercitrin binding4.76E-04
18GO:0004662: CAAX-protein geranylgeranyltransferase activity4.76E-04
19GO:0032934: sterol binding1.02E-03
20GO:0015036: disulfide oxidoreductase activity1.02E-03
21GO:0050736: O-malonyltransferase activity1.02E-03
22GO:0043565: sequence-specific DNA binding1.02E-03
23GO:0048531: beta-1,3-galactosyltransferase activity1.02E-03
24GO:0003994: aconitate hydratase activity1.02E-03
25GO:0015152: glucose-6-phosphate transmembrane transporter activity1.02E-03
26GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity1.02E-03
27GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity1.02E-03
28GO:0032403: protein complex binding1.67E-03
29GO:0071917: triose-phosphate transmembrane transporter activity1.67E-03
30GO:0005457: GDP-fucose transmembrane transporter activity1.67E-03
31GO:0003979: UDP-glucose 6-dehydrogenase activity1.67E-03
32GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.67E-03
33GO:0004324: ferredoxin-NADP+ reductase activity1.67E-03
34GO:0016531: copper chaperone activity1.67E-03
35GO:0035250: UDP-galactosyltransferase activity2.42E-03
36GO:0010178: IAA-amino acid conjugate hydrolase activity2.42E-03
37GO:0017077: oxidative phosphorylation uncoupler activity2.42E-03
38GO:0035529: NADH pyrophosphatase activity2.42E-03
39GO:0001046: core promoter sequence-specific DNA binding2.80E-03
40GO:0031418: L-ascorbic acid binding2.80E-03
41GO:0004930: G-protein coupled receptor activity3.26E-03
42GO:0009916: alternative oxidase activity3.26E-03
43GO:0015120: phosphoglycerate transmembrane transporter activity3.26E-03
44GO:0050373: UDP-arabinose 4-epimerase activity3.26E-03
45GO:0004834: tryptophan synthase activity3.26E-03
46GO:0004623: phospholipase A2 activity4.18E-03
47GO:0005496: steroid binding4.18E-03
48GO:0047631: ADP-ribose diphosphatase activity4.18E-03
49GO:0005471: ATP:ADP antiporter activity4.18E-03
50GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.18E-03
51GO:0051287: NAD binding4.94E-03
52GO:0008194: UDP-glycosyltransferase activity4.95E-03
53GO:0000210: NAD+ diphosphatase activity5.18E-03
54GO:0008519: ammonium transmembrane transporter activity5.18E-03
55GO:0005509: calcium ion binding6.10E-03
56GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity6.24E-03
57GO:0102391: decanoate--CoA ligase activity6.24E-03
58GO:0004144: diacylglycerol O-acyltransferase activity6.24E-03
59GO:0004656: procollagen-proline 4-dioxygenase activity6.24E-03
60GO:0043295: glutathione binding7.39E-03
61GO:0004467: long-chain fatty acid-CoA ligase activity7.39E-03
62GO:0016740: transferase activity7.49E-03
63GO:0016757: transferase activity, transferring glycosyl groups8.51E-03
64GO:0004708: MAP kinase kinase activity8.60E-03
65GO:0004714: transmembrane receptor protein tyrosine kinase activity8.60E-03
66GO:0047893: flavonol 3-O-glucosyltransferase activity8.60E-03
67GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity8.92E-03
68GO:0015035: protein disulfide oxidoreductase activity9.24E-03
69GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity9.88E-03
70GO:0008142: oxysterol binding9.88E-03
71GO:0004630: phospholipase D activity9.88E-03
72GO:0008375: acetylglucosaminyltransferase activity1.12E-02
73GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.12E-02
74GO:0016758: transferase activity, transferring hexosyl groups1.15E-02
75GO:0004864: protein phosphatase inhibitor activity1.41E-02
76GO:0004713: protein tyrosine kinase activity1.41E-02
77GO:0004568: chitinase activity1.41E-02
78GO:0015020: glucuronosyltransferase activity1.41E-02
79GO:0016301: kinase activity1.49E-02
80GO:0008559: xenobiotic-transporting ATPase activity1.56E-02
81GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.63E-02
82GO:0015297: antiporter activity1.68E-02
83GO:0003700: transcription factor activity, sequence-specific DNA binding1.70E-02
84GO:0005515: protein binding1.79E-02
85GO:0004712: protein serine/threonine/tyrosine kinase activity1.82E-02
86GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.88E-02
87GO:0005315: inorganic phosphate transmembrane transporter activity1.88E-02
88GO:0005262: calcium channel activity1.88E-02
89GO:0005388: calcium-transporting ATPase activity1.88E-02
90GO:0004364: glutathione transferase activity2.07E-02
91GO:0008061: chitin binding2.23E-02
92GO:0003712: transcription cofactor activity2.23E-02
93GO:0030552: cAMP binding2.23E-02
94GO:0030553: cGMP binding2.23E-02
95GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.42E-02
96GO:0042802: identical protein binding2.42E-02
97GO:0003954: NADH dehydrogenase activity2.59E-02
98GO:0008324: cation transmembrane transporter activity2.78E-02
99GO:0005216: ion channel activity2.78E-02
100GO:0005507: copper ion binding2.89E-02
101GO:0035251: UDP-glucosyltransferase activity2.97E-02
102GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.17E-02
103GO:0005516: calmodulin binding3.17E-02
104GO:0043531: ADP binding3.47E-02
105GO:0004499: N,N-dimethylaniline monooxygenase activity3.58E-02
106GO:0003756: protein disulfide isomerase activity3.58E-02
107GO:0080043: quercetin 3-O-glucosyltransferase activity3.77E-02
108GO:0080044: quercetin 7-O-glucosyltransferase activity3.77E-02
109GO:0016874: ligase activity3.89E-02
110GO:0030551: cyclic nucleotide binding4.01E-02
111GO:0005451: monovalent cation:proton antiporter activity4.01E-02
112GO:0005249: voltage-gated potassium channel activity4.01E-02
113GO:0046872: metal ion binding4.22E-02
114GO:0046873: metal ion transmembrane transporter activity4.23E-02
115GO:0015299: solute:proton antiporter activity4.45E-02
116GO:0004674: protein serine/threonine kinase activity4.59E-02
117GO:0004872: receptor activity4.68E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane1.52E-05
2GO:0005794: Golgi apparatus1.54E-04
3GO:0000813: ESCRT I complex1.96E-04
4GO:0000164: protein phosphatase type 1 complex1.96E-04
5GO:0005743: mitochondrial inner membrane3.69E-04
6GO:0005953: CAAX-protein geranylgeranyltransferase complex4.76E-04
7GO:0031304: intrinsic component of mitochondrial inner membrane1.02E-03
8GO:0005901: caveola1.02E-03
9GO:0031314: extrinsic component of mitochondrial inner membrane1.02E-03
10GO:0030658: transport vesicle membrane2.42E-03
11GO:0005789: endoplasmic reticulum membrane2.61E-03
12GO:0005886: plasma membrane2.96E-03
13GO:0009898: cytoplasmic side of plasma membrane3.26E-03
14GO:0005774: vacuolar membrane3.82E-03
15GO:0005802: trans-Golgi network1.27E-02
16GO:0005740: mitochondrial envelope1.41E-02
17GO:0000325: plant-type vacuole1.52E-02
18GO:0005768: endosome1.63E-02
19GO:0030176: integral component of endoplasmic reticulum membrane2.23E-02
20GO:0005795: Golgi stack2.23E-02
21GO:0043231: intracellular membrane-bounded organelle2.34E-02
22GO:0005758: mitochondrial intermembrane space2.59E-02
23GO:0005783: endoplasmic reticulum2.71E-02
24GO:0070469: respiratory chain2.78E-02
25GO:0005741: mitochondrial outer membrane2.97E-02
26GO:0000139: Golgi membrane3.50E-02
27GO:0005744: mitochondrial inner membrane presequence translocase complex3.58E-02
28GO:0009706: chloroplast inner membrane4.13E-02
29GO:0005770: late endosome4.23E-02
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Gene type



Gene DE type