co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G05260

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
2	GO:1902289: negative regulation of defense response to oomycetes	0.00E+00
3	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
4	GO:0005993: trehalose catabolic process	0.00E+00
5	GO:2000378: negative regulation of reactive oxygen species metabolic process	0.00E+00
6	GO:0018063: cytochrome c-heme linkage	0.00E+00
7	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
8	GO:1902009: positive regulation of toxin transport	0.00E+00
9	GO:0016559: peroxisome fission	1.94E-04
10	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.94E-04
11	GO:0006605: protein targeting	1.94E-04
12	GO:0000077: DNA damage checkpoint	2.22E-04
13	GO:0042350: GDP-L-fucose biosynthetic process	2.22E-04
14	GO:1990641: response to iron ion starvation	2.22E-04
15	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.22E-04
16	GO:1990542: mitochondrial transmembrane transport	2.22E-04
17	GO:1903648: positive regulation of chlorophyll catabolic process	2.22E-04
18	GO:0007275: multicellular organism development	2.49E-04
19	GO:0010112: regulation of systemic acquired resistance	2.91E-04
20	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	4.95E-04
21	GO:0040020: regulation of meiotic nuclear division	4.95E-04
22	GO:0006101: citrate metabolic process	4.95E-04
23	GO:0080183: response to photooxidative stress	4.95E-04
24	GO:0000266: mitochondrial fission	5.37E-04
25	GO:0052546: cell wall pectin metabolic process	8.05E-04
26	GO:0080163: regulation of protein serine/threonine phosphatase activity	8.05E-04
27	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	8.05E-04
28	GO:0006065: UDP-glucuronate biosynthetic process	8.05E-04
29	GO:0051707: response to other organism	9.41E-04
30	GO:0030150: protein import into mitochondrial matrix	9.41E-04
31	GO:0015031: protein transport	1.03E-03
32	GO:0051639: actin filament network formation	1.15E-03
33	GO:0009226: nucleotide-sugar biosynthetic process	1.15E-03
34	GO:0071323: cellular response to chitin	1.15E-03
35	GO:0080024: indolebutyric acid metabolic process	1.15E-03
36	GO:0055070: copper ion homeostasis	1.15E-03
37	GO:0001676: long-chain fatty acid metabolic process	1.15E-03
38	GO:0055089: fatty acid homeostasis	1.15E-03
39	GO:0051764: actin crosslink formation	1.53E-03
40	GO:0015867: ATP transport	1.53E-03
41	GO:0006097: glyoxylate cycle	1.95E-03
42	GO:0009229: thiamine diphosphate biosynthetic process	1.95E-03
43	GO:0009738: abscisic acid-activated signaling pathway	2.09E-03
44	GO:0006623: protein targeting to vacuole	2.12E-03
45	GO:0015866: ADP transport	2.40E-03
46	GO:0010256: endomembrane system organization	2.40E-03
47	GO:0009228: thiamine biosynthetic process	2.40E-03
48	GO:1900425: negative regulation of defense response to bacterium	2.40E-03
49	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	3.40E-03
50	GO:2000014: regulation of endosperm development	3.40E-03
51	GO:1900057: positive regulation of leaf senescence	3.40E-03
52	GO:0010044: response to aluminum ion	3.40E-03
53	GO:0006102: isocitrate metabolic process	3.94E-03
54	GO:0045010: actin nucleation	3.94E-03
55	GO:0031540: regulation of anthocyanin biosynthetic process	3.94E-03
56	GO:0010150: leaf senescence	4.26E-03
57	GO:0017004: cytochrome complex assembly	4.51E-03
58	GO:0007338: single fertilization	5.11E-03
59	GO:0010332: response to gamma radiation	5.11E-03
60	GO:0000902: cell morphogenesis	5.11E-03
61	GO:0009086: methionine biosynthetic process	5.74E-03
62	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.74E-03
63	GO:0008202: steroid metabolic process	5.74E-03
64	GO:0016441: posttranscriptional gene silencing	6.38E-03
65	GO:0006631: fatty acid metabolic process	6.39E-03
66	GO:0019684: photosynthesis, light reaction	7.06E-03
67	GO:0009089: lysine biosynthetic process via diaminopimelate	7.06E-03
68	GO:0045037: protein import into chloroplast stroma	7.76E-03
69	GO:2000012: regulation of auxin polar transport	8.48E-03
70	GO:0010102: lateral root morphogenesis	8.48E-03
71	GO:0030036: actin cytoskeleton organization	8.48E-03
72	GO:0018107: peptidyl-threonine phosphorylation	8.48E-03
73	GO:0009846: pollen germination	8.71E-03
74	GO:0002237: response to molecule of bacterial origin	9.23E-03
75	GO:0007015: actin filament organization	9.23E-03
76	GO:0090351: seedling development	1.00E-02
77	GO:0070588: calcium ion transmembrane transport	1.00E-02
78	GO:0000162: tryptophan biosynthetic process	1.08E-02
79	GO:0006636: unsaturated fatty acid biosynthetic process	1.08E-02
80	GO:0080147: root hair cell development	1.16E-02
81	GO:0051017: actin filament bundle assembly	1.16E-02
82	GO:0006289: nucleotide-excision repair	1.16E-02
83	GO:0006886: intracellular protein transport	1.28E-02
84	GO:0006334: nucleosome assembly	1.33E-02
85	GO:0009269: response to desiccation	1.33E-02
86	GO:0018105: peptidyl-serine phosphorylation	1.38E-02
87	GO:0007005: mitochondrion organization	1.42E-02
88	GO:0031348: negative regulation of defense response	1.42E-02
89	GO:0071456: cellular response to hypoxia	1.42E-02
90	GO:0006012: galactose metabolic process	1.51E-02
91	GO:0009411: response to UV	1.51E-02
92	GO:0009960: endosperm development	1.89E-02
93	GO:0071554: cell wall organization or biogenesis	2.19E-02
94	GO:0010193: response to ozone	2.19E-02
95	GO:0006891: intra-Golgi vesicle-mediated transport	2.19E-02
96	GO:0006635: fatty acid beta-oxidation	2.19E-02
97	GO:0016032: viral process	2.30E-02
98	GO:0030163: protein catabolic process	2.41E-02
99	GO:0009567: double fertilization forming a zygote and endosperm	2.52E-02
100	GO:0071805: potassium ion transmembrane transport	2.63E-02
101	GO:0006470: protein dephosphorylation	2.65E-02
102	GO:0007166: cell surface receptor signaling pathway	2.65E-02
103	GO:0051607: defense response to virus	2.74E-02
104	GO:0008380: RNA splicing	2.76E-02
105	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.97E-02
106	GO:0010029: regulation of seed germination	2.97E-02
107	GO:0009816: defense response to bacterium, incompatible interaction	2.97E-02
108	GO:0006906: vesicle fusion	3.09E-02
109	GO:0048767: root hair elongation	3.57E-02
110	GO:0000724: double-strand break repair via homologous recombination	3.95E-02
111	GO:0009853: photorespiration	4.08E-02
112	GO:0045087: innate immune response	4.08E-02
113	GO:0006099: tricarboxylic acid cycle	4.21E-02
114	GO:0006810: transport	4.41E-02
115	GO:0006839: mitochondrial transport	4.47E-02
116	GO:0006457: protein folding	4.52E-02
117	GO:0006887: exocytosis	4.61E-02
118	GO:0016192: vesicle-mediated transport	4.65E-02
119	GO:0010114: response to red light	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
2	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
3	GO:0004555: alpha,alpha-trehalase activity	0.00E+00
4	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
5	GO:0050334: thiaminase activity	0.00E+00
6	GO:0034338: short-chain carboxylesterase activity	0.00E+00
7	GO:0004656: procollagen-proline 4-dioxygenase activity	1.15E-04
8	GO:0050577: GDP-L-fucose synthase activity	2.22E-04
9	GO:0015927: trehalase activity	2.22E-04
10	GO:0030942: endoplasmic reticulum signal peptide binding	2.22E-04
11	GO:0047150: betaine-homocysteine S-methyltransferase activity	2.22E-04
12	GO:0010285: L,L-diaminopimelate aminotransferase activity	2.22E-04
13	GO:0003994: aconitate hydratase activity	4.95E-04
14	GO:0000774: adenyl-nucleotide exchange factor activity	4.95E-04
15	GO:0032934: sterol binding	4.95E-04
16	GO:0050736: O-malonyltransferase activity	4.95E-04
17	GO:0015036: disulfide oxidoreductase activity	4.95E-04
18	GO:0005509: calcium ion binding	5.10E-04
19	GO:0003979: UDP-glucose 6-dehydrogenase activity	8.05E-04
20	GO:0000975: regulatory region DNA binding	8.05E-04
21	GO:0031418: L-ascorbic acid binding	9.41E-04
22	GO:0017077: oxidative phosphorylation uncoupler activity	1.15E-03
23	GO:0035529: NADH pyrophosphatase activity	1.15E-03
24	GO:0004834: tryptophan synthase activity	1.53E-03
25	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	1.95E-03
26	GO:0004623: phospholipase A2 activity	1.95E-03
27	GO:0047631: ADP-ribose diphosphatase activity	1.95E-03
28	GO:0050662: coenzyme binding	1.97E-03
29	GO:0000210: NAD+ diphosphatase activity	2.40E-03
30	GO:0015217: ADP transmembrane transporter activity	2.89E-03
31	GO:0102391: decanoate--CoA ligase activity	2.89E-03
32	GO:0003978: UDP-glucose 4-epimerase activity	2.89E-03
33	GO:0005347: ATP transmembrane transporter activity	2.89E-03
34	GO:0008320: protein transmembrane transporter activity	3.40E-03
35	GO:0004467: long-chain fatty acid-CoA ligase activity	3.40E-03
36	GO:0008312: 7S RNA binding	3.94E-03
37	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.94E-03
38	GO:0052747: sinapyl alcohol dehydrogenase activity	3.94E-03
39	GO:0008142: oxysterol binding	4.51E-03
40	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	5.38E-03
41	GO:0030234: enzyme regulator activity	6.38E-03
42	GO:0004864: protein phosphatase inhibitor activity	6.38E-03
43	GO:0045551: cinnamyl-alcohol dehydrogenase activity	7.76E-03
44	GO:0051287: NAD binding	8.40E-03
45	GO:0005388: calcium-transporting ATPase activity	8.48E-03
46	GO:0004022: alcohol dehydrogenase (NAD) activity	8.48E-03
47	GO:0008061: chitin binding	1.00E-02
48	GO:0003712: transcription cofactor activity	1.00E-02
49	GO:0051087: chaperone binding	1.24E-02
50	GO:0015079: potassium ion transmembrane transporter activity	1.24E-02
51	GO:0042803: protein homodimerization activity	1.30E-02
52	GO:0005102: receptor binding	1.70E-02
53	GO:0030170: pyridoxal phosphate binding	1.86E-02
54	GO:0016853: isomerase activity	1.99E-02
55	GO:0008565: protein transporter activity	2.01E-02
56	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.16E-02
57	GO:0051015: actin filament binding	2.41E-02
58	GO:0008483: transaminase activity	2.63E-02
59	GO:0016413: O-acetyltransferase activity	2.74E-02
60	GO:0046872: metal ion binding	2.93E-02
61	GO:0008375: acetylglucosaminyltransferase activity	3.09E-02
62	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.09E-02
63	GO:0030247: polysaccharide binding	3.20E-02
64	GO:0004683: calmodulin-dependent protein kinase activity	3.20E-02
65	GO:0003682: chromatin binding	3.78E-02
66	GO:0000149: SNARE binding	4.34E-02
67	GO:0051539: 4 iron, 4 sulfur cluster binding	4.47E-02
68	GO:0005484: SNAP receptor activity	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	5.15E-05
2	GO:0031902: late endosome membrane	9.20E-05
3	GO:0005789: endoplasmic reticulum membrane	1.16E-04
4	GO:0005743: mitochondrial inner membrane	1.33E-04
5	GO:0001405: presequence translocase-associated import motor	2.22E-04
6	GO:0030665: clathrin-coated vesicle membrane	3.46E-04
7	GO:0017119: Golgi transport complex	4.05E-04
8	GO:0031314: extrinsic component of mitochondrial inner membrane	4.95E-04
9	GO:0005794: Golgi apparatus	6.22E-04
10	GO:0005795: Golgi stack	7.67E-04
11	GO:0005741: mitochondrial outer membrane	1.13E-03
12	GO:0032432: actin filament bundle	1.15E-03
13	GO:0030658: transport vesicle membrane	1.15E-03
14	GO:0000164: protein phosphatase type 1 complex	1.95E-03
15	GO:0005777: peroxisome	2.82E-03
16	GO:0005885: Arp2/3 protein complex	2.89E-03
17	GO:0005778: peroxisomal membrane	2.91E-03
18	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	3.40E-03
19	GO:0005779: integral component of peroxisomal membrane	4.51E-03
20	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	4.51E-03
21	GO:0008540: proteasome regulatory particle, base subcomplex	5.74E-03
22	GO:0005783: endoplasmic reticulum	6.83E-03
23	GO:0005884: actin filament	7.06E-03
24	GO:0005829: cytosol	1.10E-02
25	GO:0000139: Golgi membrane	1.29E-02
26	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.60E-02
27	GO:0009543: chloroplast thylakoid lumen	1.67E-02
28	GO:0019898: extrinsic component of membrane	2.09E-02
29	GO:0005887: integral component of plasma membrane	2.36E-02
30	GO:0005774: vacuolar membrane	2.44E-02
31	GO:0032580: Golgi cisterna membrane	2.52E-02
32	GO:0000325: plant-type vacuole	3.82E-02
33	GO:0031201: SNARE complex	4.61E-02