co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G05210

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006437: tyrosyl-tRNA aminoacylation	0.00E+00
2	GO:0070125: mitochondrial translational elongation	0.00E+00
3	GO:0046474: glycerophospholipid biosynthetic process	0.00E+00
4	GO:0046486: glycerolipid metabolic process	0.00E+00
5	GO:0006436: tryptophanyl-tRNA aminoacylation	1.14E-04
6	GO:0051013: microtubule severing	1.14E-04
7	GO:0019478: D-amino acid catabolic process	1.14E-04
8	GO:0043489: RNA stabilization	1.14E-04
9	GO:0043039: tRNA aminoacylation	2.65E-04
10	GO:0006650: glycerophospholipid metabolic process	2.65E-04
11	GO:0001736: establishment of planar polarity	2.65E-04
12	GO:0009734: auxin-activated signaling pathway	2.73E-04
13	GO:0009926: auxin polar transport	2.87E-04
14	GO:0009825: multidimensional cell growth	3.08E-04
15	GO:0006418: tRNA aminoacylation for protein translation	4.22E-04
16	GO:0045910: negative regulation of DNA recombination	4.38E-04
17	GO:0046168: glycerol-3-phosphate catabolic process	4.38E-04
18	GO:0010239: chloroplast mRNA processing	6.29E-04
19	GO:0006072: glycerol-3-phosphate metabolic process	6.29E-04
20	GO:0045017: glycerolipid biosynthetic process	6.29E-04
21	GO:0009956: radial pattern formation	8.35E-04
22	GO:0010158: abaxial cell fate specification	1.05E-03
23	GO:0009696: salicylic acid metabolic process	1.05E-03
24	GO:0080110: sporopollenin biosynthetic process	1.05E-03
25	GO:0010236: plastoquinone biosynthetic process	1.05E-03
26	GO:0016554: cytidine to uridine editing	1.29E-03
27	GO:0006655: phosphatidylglycerol biosynthetic process	1.29E-03
28	GO:0009627: systemic acquired resistance	1.45E-03
29	GO:1901259: chloroplast rRNA processing	1.54E-03
30	GO:0009942: longitudinal axis specification	1.54E-03
31	GO:0030488: tRNA methylation	1.54E-03
32	GO:0010050: vegetative phase change	1.81E-03
33	GO:0015693: magnesium ion transport	1.81E-03
34	GO:0006353: DNA-templated transcription, termination	2.09E-03
35	GO:0009850: auxin metabolic process	2.09E-03
36	GO:0009657: plastid organization	2.39E-03
37	GO:0019430: removal of superoxide radicals	2.39E-03
38	GO:0007389: pattern specification process	2.39E-03
39	GO:0000373: Group II intron splicing	2.70E-03
40	GO:1900865: chloroplast RNA modification	3.02E-03
41	GO:0042761: very long-chain fatty acid biosynthetic process	3.02E-03
42	GO:0006298: mismatch repair	3.36E-03
43	GO:0006535: cysteine biosynthetic process from serine	3.36E-03
44	GO:0048829: root cap development	3.36E-03
45	GO:0048765: root hair cell differentiation	3.71E-03
46	GO:0010582: floral meristem determinacy	4.06E-03
47	GO:0010540: basipetal auxin transport	4.81E-03
48	GO:0010020: chloroplast fission	4.81E-03
49	GO:0009933: meristem structural organization	4.81E-03
50	GO:0010207: photosystem II assembly	4.81E-03
51	GO:0009624: response to nematode	5.21E-03
52	GO:0006863: purine nucleobase transport	5.61E-03
53	GO:0010025: wax biosynthetic process	5.61E-03
54	GO:0019344: cysteine biosynthetic process	6.03E-03
55	GO:0009793: embryo development ending in seed dormancy	6.30E-03
56	GO:0043622: cortical microtubule organization	6.45E-03
57	GO:0003333: amino acid transmembrane transport	6.89E-03
58	GO:0009733: response to auxin	7.28E-03
59	GO:0035428: hexose transmembrane transport	7.34E-03
60	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	7.79E-03
61	GO:0010584: pollen exine formation	8.26E-03
62	GO:0006284: base-excision repair	8.26E-03
63	GO:0010091: trichome branching	8.26E-03
64	GO:0016117: carotenoid biosynthetic process	8.74E-03
65	GO:0045490: pectin catabolic process	9.00E-03
66	GO:0000226: microtubule cytoskeleton organization	9.23E-03
67	GO:0000271: polysaccharide biosynthetic process	9.23E-03
68	GO:0034220: ion transmembrane transport	9.23E-03
69	GO:0046323: glucose import	9.73E-03
70	GO:0045489: pectin biosynthetic process	9.73E-03
71	GO:0010305: leaf vascular tissue pattern formation	9.73E-03
72	GO:0009958: positive gravitropism	9.73E-03
73	GO:0008654: phospholipid biosynthetic process	1.08E-02
74	GO:0010583: response to cyclopentenone	1.18E-02
75	GO:0010090: trichome morphogenesis	1.24E-02
76	GO:0010252: auxin homeostasis	1.29E-02
77	GO:0006914: autophagy	1.29E-02
78	GO:0009828: plant-type cell wall loosening	1.29E-02
79	GO:0010411: xyloglucan metabolic process	1.64E-02
80	GO:0009817: defense response to fungus, incompatible interaction	1.77E-02
81	GO:0048481: plant ovule development	1.77E-02
82	GO:0018298: protein-chromophore linkage	1.77E-02
83	GO:0000160: phosphorelay signal transduction system	1.83E-02
84	GO:0010311: lateral root formation	1.83E-02
85	GO:0009832: plant-type cell wall biogenesis	1.83E-02
86	GO:0006811: ion transport	1.89E-02
87	GO:0009631: cold acclimation	1.96E-02
88	GO:0006865: amino acid transport	2.02E-02
89	GO:0016051: carbohydrate biosynthetic process	2.09E-02
90	GO:0006631: fatty acid metabolic process	2.36E-02
91	GO:0071555: cell wall organization	2.45E-02
92	GO:0006281: DNA repair	2.56E-02
93	GO:0042546: cell wall biogenesis	2.57E-02
94	GO:0009965: leaf morphogenesis	2.72E-02
95	GO:0009664: plant-type cell wall organization	2.94E-02
96	GO:0009736: cytokinin-activated signaling pathway	3.09E-02
97	GO:0048316: seed development	3.57E-02
98	GO:0006396: RNA processing	4.06E-02

Rank	GO Term	Adjusted P value
1	GO:0010355: homogentisate farnesyltransferase activity	0.00E+00
2	GO:0010356: homogentisate geranylgeranyltransferase activity	0.00E+00
3	GO:0010357: homogentisate solanesyltransferase activity	0.00E+00
4	GO:0008444: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity	1.14E-04
5	GO:0017169: CDP-alcohol phosphatidyltransferase activity	1.14E-04
6	GO:0004831: tyrosine-tRNA ligase activity	1.14E-04
7	GO:0008568: microtubule-severing ATPase activity	1.14E-04
8	GO:0004830: tryptophan-tRNA ligase activity	1.14E-04
9	GO:0050017: L-3-cyanoalanine synthase activity	2.65E-04
10	GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups	4.38E-04
11	GO:0003913: DNA photolyase activity	4.38E-04
12	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	4.38E-04
13	GO:0030570: pectate lyase activity	5.51E-04
14	GO:0080031: methyl salicylate esterase activity	6.29E-04
15	GO:0004300: enoyl-CoA hydratase activity	6.29E-04
16	GO:0004812: aminoacyl-tRNA ligase activity	6.47E-04
17	GO:0010011: auxin binding	8.35E-04
18	GO:0010328: auxin influx transmembrane transporter activity	8.35E-04
19	GO:0008725: DNA-3-methyladenine glycosylase activity	1.05E-03
20	GO:0030983: mismatched DNA binding	1.29E-03
21	GO:0080030: methyl indole-3-acetate esterase activity	1.29E-03
22	GO:0004784: superoxide dismutase activity	1.29E-03
23	GO:0004124: cysteine synthase activity	1.54E-03
24	GO:0009881: photoreceptor activity	1.81E-03
25	GO:0003746: translation elongation factor activity	2.13E-03
26	GO:0003723: RNA binding	2.32E-03
27	GO:0043621: protein self-association	2.96E-03
28	GO:0009672: auxin:proton symporter activity	3.02E-03
29	GO:0004161: dimethylallyltranstransferase activity	3.71E-03
30	GO:0015095: magnesium ion transmembrane transporter activity	4.43E-03
31	GO:0010329: auxin efflux transmembrane transporter activity	4.43E-03
32	GO:0005525: GTP binding	4.46E-03
33	GO:0008266: poly(U) RNA binding	4.81E-03
34	GO:0008061: chitin binding	5.21E-03
35	GO:0004519: endonuclease activity	5.40E-03
36	GO:0051536: iron-sulfur cluster binding	6.03E-03
37	GO:0051087: chaperone binding	6.45E-03
38	GO:0005345: purine nucleobase transmembrane transporter activity	6.45E-03
39	GO:0016829: lyase activity	7.06E-03
40	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	7.34E-03
41	GO:0010181: FMN binding	1.02E-02
42	GO:0005355: glucose transmembrane transporter activity	1.02E-02
43	GO:0050662: coenzyme binding	1.02E-02
44	GO:0003729: mRNA binding	1.12E-02
45	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.13E-02
46	GO:0000156: phosphorelay response regulator activity	1.24E-02
47	GO:0003684: damaged DNA binding	1.29E-02
48	GO:0016788: hydrolase activity, acting on ester bonds	1.42E-02
49	GO:0015250: water channel activity	1.46E-02
50	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.64E-02
51	GO:0016787: hydrolase activity	1.93E-02
52	GO:0030145: manganese ion binding	1.96E-02
53	GO:0003697: single-stranded DNA binding	2.09E-02
54	GO:0003924: GTPase activity	2.56E-02
55	GO:0015293: symporter activity	2.72E-02
56	GO:0051287: NAD binding	2.87E-02
57	GO:0003690: double-stranded DNA binding	3.17E-02
58	GO:0015171: amino acid transmembrane transporter activity	3.33E-02
59	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.57E-02
60	GO:0004386: helicase activity	4.23E-02
61	GO:0016758: transferase activity, transferring hexosyl groups	4.58E-02
62	GO:0019843: rRNA binding	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0035452: extrinsic component of plastid membrane	0.00E+00
2	GO:0009570: chloroplast stroma	1.37E-04
3	GO:0009507: chloroplast	2.19E-04
4	GO:0042646: plastid nucleoid	6.29E-04
5	GO:0009331: glycerol-3-phosphate dehydrogenase complex	6.29E-04
6	GO:0009941: chloroplast envelope	6.92E-04
7	GO:0009986: cell surface	1.81E-03
8	GO:0042807: central vacuole	1.81E-03
9	GO:0000326: protein storage vacuole	2.39E-03
10	GO:0046930: pore complex	2.39E-03
11	GO:0042644: chloroplast nucleoid	2.70E-03
12	GO:0031090: organelle membrane	2.70E-03
13	GO:0005759: mitochondrial matrix	8.20E-03
14	GO:0009295: nucleoid	1.35E-02
15	GO:0030529: intracellular ribonucleoprotein complex	1.46E-02
16	GO:0005874: microtubule	1.68E-02
17	GO:0031969: chloroplast membrane	1.74E-02
18	GO:0009707: chloroplast outer membrane	1.77E-02