Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G04160

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006073: cellular glucan metabolic process0.00E+00
2GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
3GO:0071284: cellular response to lead ion0.00E+00
4GO:0023052: signaling0.00E+00
5GO:0048227: plasma membrane to endosome transport0.00E+00
6GO:0006721: terpenoid metabolic process0.00E+00
7GO:0015798: myo-inositol transport1.30E-05
8GO:0071280: cellular response to copper ion1.30E-05
9GO:0016487: farnesol metabolic process1.30E-05
10GO:0080026: response to indolebutyric acid3.42E-05
11GO:0071457: cellular response to ozone3.42E-05
12GO:0007264: small GTPase mediated signal transduction5.56E-05
13GO:0044746: amino acid transmembrane export6.16E-05
14GO:0080024: indolebutyric acid metabolic process9.36E-05
15GO:0071484: cellular response to light intensity9.36E-05
16GO:0071329: cellular response to sucrose stimulus9.36E-05
17GO:0071493: cellular response to UV-B1.68E-04
18GO:0048317: seed morphogenesis2.10E-04
19GO:0031347: regulation of defense response2.21E-04
20GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c2.99E-04
21GO:0006744: ubiquinone biosynthetic process2.99E-04
22GO:2000014: regulation of endosperm development2.99E-04
23GO:0019430: removal of superoxide radicals3.94E-04
24GO:0006349: regulation of gene expression by genetic imprinting4.96E-04
25GO:0030042: actin filament depolymerization4.96E-04
26GO:0046688: response to copper ion8.32E-04
27GO:0010039: response to iron ion8.32E-04
28GO:0019748: secondary metabolic process1.14E-03
29GO:0035428: hexose transmembrane transport1.14E-03
30GO:0045892: negative regulation of transcription, DNA-templated1.34E-03
31GO:0046323: glucose import1.48E-03
32GO:0071472: cellular response to salt stress1.48E-03
33GO:0009646: response to absence of light1.56E-03
34GO:0010193: response to ozone1.70E-03
35GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.26E-03
36GO:0010411: xyloglucan metabolic process2.43E-03
37GO:0048767: root hair elongation2.69E-03
38GO:0006499: N-terminal protein myristoylation2.78E-03
39GO:0035195: gene silencing by miRNA3.05E-03
40GO:0034599: cellular response to oxidative stress3.15E-03
41GO:0006099: tricarboxylic acid cycle3.15E-03
42GO:0006631: fatty acid metabolic process3.43E-03
43GO:0042546: cell wall biogenesis3.73E-03
44GO:0048316: seed development5.09E-03
45GO:0009624: response to nematode5.66E-03
46GO:0006979: response to oxidative stress5.72E-03
47GO:0015031: protein transport7.21E-03
48GO:0042744: hydrogen peroxide catabolic process7.23E-03
49GO:0016192: vesicle-mediated transport1.35E-02
50GO:0055114: oxidation-reduction process1.48E-02
51GO:0006508: proteolysis1.75E-02
52GO:0055085: transmembrane transport3.07E-02
53GO:0071555: cell wall organization4.29E-02
54GO:0042742: defense response to bacterium4.29E-02
RankGO TermAdjusted P value
1GO:0047886: farnesol dehydrogenase activity0.00E+00
2GO:0016405: CoA-ligase activity0.00E+00
3GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity1.30E-05
4GO:0005366: myo-inositol:proton symporter activity3.42E-05
5GO:0005093: Rab GDP-dissociation inhibitor activity6.16E-05
6GO:0004108: citrate (Si)-synthase activity9.36E-05
7GO:0015186: L-glutamine transmembrane transporter activity9.36E-05
8GO:0016004: phospholipase activator activity1.30E-04
9GO:0004784: superoxide dismutase activity2.10E-04
10GO:0008121: ubiquinol-cytochrome-c reductase activity2.99E-04
11GO:0016207: 4-coumarate-CoA ligase activity4.45E-04
12GO:0008559: xenobiotic-transporting ATPase activity6.03E-04
13GO:0016491: oxidoreductase activity1.01E-03
14GO:0018024: histone-lysine N-methyltransferase activity1.34E-03
15GO:0005355: glucose transmembrane transporter activity1.56E-03
16GO:0050662: coenzyme binding1.56E-03
17GO:0016762: xyloglucan:xyloglucosyl transferase activity1.70E-03
18GO:0016798: hydrolase activity, acting on glycosyl bonds2.43E-03
19GO:0005096: GTPase activator activity2.69E-03
20GO:0004185: serine-type carboxypeptidase activity3.63E-03
21GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups5.09E-03
22GO:0003779: actin binding5.54E-03
23GO:0016746: transferase activity, transferring acyl groups5.77E-03
24GO:0015144: carbohydrate transmembrane transporter activity7.48E-03
25GO:0005351: sugar:proton symporter activity8.13E-03
26GO:0042626: ATPase activity, coupled to transmembrane movement of substances9.77E-03
27GO:0004601: peroxidase activity1.12E-02
28GO:0008233: peptidase activity1.29E-02
29GO:0016887: ATPase activity2.35E-02
30GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.16E-02
31GO:0005507: copper ion binding3.33E-02
32GO:0005516: calmodulin binding3.47E-02
33GO:0005525: GTP binding3.70E-02
34GO:0008270: zinc ion binding4.16E-02
35GO:0003824: catalytic activity4.58E-02
36GO:0005215: transporter activity4.60E-02
RankGO TermAdjusted P value
1GO:0031519: PcG protein complex6.16E-05
2GO:0005798: Golgi-associated vesicle2.10E-04
3GO:0005777: peroxisome3.51E-04
4GO:0031090: organelle membrane4.45E-04
5GO:0005740: mitochondrial envelope5.49E-04
6GO:0005774: vacuolar membrane5.51E-04
7GO:0005750: mitochondrial respiratory chain complex III7.72E-04
8GO:0015629: actin cytoskeleton1.21E-03
9GO:0000325: plant-type vacuole2.87E-03
10GO:0090406: pollen tube3.63E-03
11GO:0005759: mitochondrial matrix7.74E-03
12GO:0048046: apoplast2.07E-02
13GO:0005773: vacuole3.03E-02
14GO:0031225: anchored component of membrane3.56E-02
15GO:0005622: intracellular3.90E-02
16GO:0005768: endosome3.97E-02
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Gene type



Gene DE type