Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G04039

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006203: dGTP catabolic process0.00E+00
2GO:0006081: cellular aldehyde metabolic process1.09E-04
3GO:0071484: cellular response to light intensity1.62E-04
4GO:0006021: inositol biosynthetic process2.21E-04
5GO:0010117: photoprotection2.84E-04
6GO:0009972: cytidine deamination3.51E-04
7GO:0010264: myo-inositol hexakisphosphate biosynthetic process3.51E-04
8GO:0010189: vitamin E biosynthetic process4.20E-04
9GO:0009644: response to high light intensity4.24E-04
10GO:1900057: positive regulation of leaf senescence4.92E-04
11GO:0008272: sulfate transport4.92E-04
12GO:0019827: stem cell population maintenance5.68E-04
13GO:0008610: lipid biosynthetic process5.68E-04
14GO:0006096: glycolytic process6.17E-04
15GO:0043086: negative regulation of catalytic activity6.17E-04
16GO:0071482: cellular response to light stimulus6.45E-04
17GO:0009051: pentose-phosphate shunt, oxidative branch7.25E-04
18GO:0010205: photoinhibition8.07E-04
19GO:0006535: cysteine biosynthetic process from serine8.92E-04
20GO:0009698: phenylpropanoid metabolic process9.78E-04
21GO:0009773: photosynthetic electron transport in photosystem I9.78E-04
22GO:0006006: glucose metabolic process1.16E-03
23GO:0006094: gluconeogenesis1.16E-03
24GO:0019253: reductive pentose-phosphate cycle1.25E-03
25GO:0010143: cutin biosynthetic process1.25E-03
26GO:0010025: wax biosynthetic process1.45E-03
27GO:0006636: unsaturated fatty acid biosynthetic process1.45E-03
28GO:0019344: cysteine biosynthetic process1.55E-03
29GO:0007017: microtubule-based process1.65E-03
30GO:0031408: oxylipin biosynthetic process1.76E-03
31GO:0016998: cell wall macromolecule catabolic process1.76E-03
32GO:0016117: carotenoid biosynthetic process2.21E-03
33GO:0010118: stomatal movement2.33E-03
34GO:0019252: starch biosynthetic process2.70E-03
35GO:0008654: phospholipid biosynthetic process2.70E-03
36GO:0045454: cell redox homeostasis2.77E-03
37GO:0009408: response to heat3.41E-03
38GO:0051607: defense response to virus3.49E-03
39GO:0006974: cellular response to DNA damage stimulus3.90E-03
40GO:0010411: xyloglucan metabolic process4.05E-03
41GO:0015995: chlorophyll biosynthetic process4.05E-03
42GO:0010311: lateral root formation4.49E-03
43GO:0000160: phosphorelay signal transduction system4.49E-03
44GO:0006631: fatty acid metabolic process5.75E-03
45GO:0042542: response to hydrogen peroxide5.91E-03
46GO:0051707: response to other organism6.08E-03
47GO:0042546: cell wall biogenesis6.25E-03
48GO:0009736: cytokinin-activated signaling pathway7.47E-03
49GO:0006857: oligopeptide transport7.84E-03
50GO:0042545: cell wall modification9.36E-03
51GO:0006633: fatty acid biosynthetic process1.31E-02
52GO:0016036: cellular response to phosphate starvation1.34E-02
53GO:0009733: response to auxin1.37E-02
54GO:0045490: pectin catabolic process1.40E-02
55GO:0055114: oxidation-reduction process1.54E-02
56GO:0005975: carbohydrate metabolic process1.86E-02
57GO:0006970: response to osmotic stress2.02E-02
58GO:0010200: response to chitin2.29E-02
59GO:0015979: photosynthesis2.45E-02
60GO:0006869: lipid transport2.71E-02
61GO:0032259: methylation2.86E-02
62GO:0016042: lipid catabolic process2.89E-02
63GO:0050832: defense response to fungus3.63E-02
64GO:0009734: auxin-activated signaling pathway3.76E-02
65GO:0009735: response to cytokinin4.16E-02
RankGO TermAdjusted P value
1GO:0008413: 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity0.00E+00
2GO:0045550: geranylgeranyl reductase activity0.00E+00
3GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
4GO:0019177: dihydroneopterin triphosphate pyrophosphohydrolase activity0.00E+00
5GO:0035539: 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity0.00E+00
6GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
7GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
8GO:0033840: NDP-glucose-starch glucosyltransferase activity0.00E+00
9GO:0031957: very long-chain fatty acid-CoA ligase activity2.41E-05
10GO:0030794: (S)-coclaurine-N-methyltransferase activity2.41E-05
11GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity2.41E-05
12GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity6.16E-05
13GO:0050017: L-3-cyanoalanine synthase activity6.16E-05
14GO:0008509: anion transmembrane transporter activity6.16E-05
15GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity6.16E-05
16GO:0004512: inositol-3-phosphate synthase activity6.16E-05
17GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity1.09E-04
18GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.09E-04
19GO:0004373: glycogen (starch) synthase activity1.09E-04
20GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.62E-04
21GO:0017057: 6-phosphogluconolactonase activity1.62E-04
22GO:0009011: starch synthase activity2.21E-04
23GO:0000210: NAD+ diphosphatase activity3.51E-04
24GO:0004029: aldehyde dehydrogenase (NAD) activity3.51E-04
25GO:0004332: fructose-bisphosphate aldolase activity3.51E-04
26GO:0004124: cysteine synthase activity4.20E-04
27GO:0004126: cytidine deaminase activity4.20E-04
28GO:0102391: decanoate--CoA ligase activity4.20E-04
29GO:0004620: phospholipase activity4.92E-04
30GO:0004467: long-chain fatty acid-CoA ligase activity4.92E-04
31GO:0015140: malate transmembrane transporter activity4.92E-04
32GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water6.45E-04
33GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity8.07E-04
34GO:0046910: pectinesterase inhibitor activity1.16E-03
35GO:0004565: beta-galactosidase activity1.16E-03
36GO:0003954: NADH dehydrogenase activity1.55E-03
37GO:0016762: xyloglucan:xyloglucosyl transferase activity2.82E-03
38GO:0000156: phosphorelay response regulator activity3.08E-03
39GO:0005200: structural constituent of cytoskeleton3.35E-03
40GO:0009055: electron carrier activity3.65E-03
41GO:0016798: hydrolase activity, acting on glycosyl bonds4.05E-03
42GO:0050661: NADP binding5.59E-03
43GO:0004185: serine-type carboxypeptidase activity6.08E-03
44GO:0051287: NAD binding6.94E-03
45GO:0045330: aspartyl esterase activity8.02E-03
46GO:0030599: pectinesterase activity9.16E-03
47GO:0015035: protein disulfide oxidoreductase activity9.75E-03
48GO:0030170: pyridoxal phosphate binding1.20E-02
49GO:0042802: identical protein binding1.66E-02
50GO:0008168: methyltransferase activity1.86E-02
51GO:0016788: hydrolase activity, acting on ester bonds1.94E-02
52GO:0005515: protein binding2.21E-02
53GO:0052689: carboxylic ester hydrolase activity2.40E-02
54GO:0016787: hydrolase activity2.62E-02
55GO:0003924: GTPase activity2.95E-02
56GO:0008289: lipid binding3.73E-02
RankGO TermAdjusted P value
1GO:0031304: intrinsic component of mitochondrial inner membrane6.16E-05
2GO:0009569: chloroplast starch grain6.16E-05
3GO:0048046: apoplast3.72E-04
4GO:0045298: tubulin complex7.25E-04
5GO:0008180: COP9 signalosome7.25E-04
6GO:0009534: chloroplast thylakoid9.87E-04
7GO:0005618: cell wall2.21E-03
8GO:0031969: chloroplast membrane2.32E-03
9GO:0019005: SCF ubiquitin ligase complex4.34E-03
10GO:0000502: proteasome complex7.47E-03
11GO:0012505: endomembrane system9.36E-03
12GO:0009941: chloroplast envelope1.33E-02
13GO:0009705: plant-type vacuole membrane1.40E-02
14GO:0009505: plant-type cell wall1.53E-02
15GO:0005773: vacuole1.55E-02
16GO:0009507: chloroplast2.15E-02
17GO:0005874: microtubule2.18E-02
18GO:0009535: chloroplast thylakoid membrane2.74E-02
19GO:0005777: peroxisome4.89E-02
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Gene type



Gene DE type