GO Enrichment Analysis of Co-expressed Genes with
AT2G04032
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006849: plasma membrane pyruvate transport | 0.00E+00 |
| 2 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 3 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 4 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 5 | GO:1904966: positive regulation of vitamin E biosynthetic process | 9.69E-05 |
| 6 | GO:1904964: positive regulation of phytol biosynthetic process | 9.69E-05 |
| 7 | GO:0043007: maintenance of rDNA | 9.69E-05 |
| 8 | GO:0034337: RNA folding | 9.69E-05 |
| 9 | GO:0005991: trehalose metabolic process | 9.69E-05 |
| 10 | GO:0030048: actin filament-based movement | 1.93E-04 |
| 11 | GO:0018026: peptidyl-lysine monomethylation | 2.28E-04 |
| 12 | GO:0060151: peroxisome localization | 2.28E-04 |
| 13 | GO:0051645: Golgi localization | 2.28E-04 |
| 14 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.28E-04 |
| 15 | GO:0090436: leaf pavement cell development | 3.80E-04 |
| 16 | GO:0006696: ergosterol biosynthetic process | 3.80E-04 |
| 17 | GO:0072661: protein targeting to plasma membrane | 3.80E-04 |
| 18 | GO:0009405: pathogenesis | 3.80E-04 |
| 19 | GO:0051646: mitochondrion localization | 3.80E-04 |
| 20 | GO:0015979: photosynthesis | 4.29E-04 |
| 21 | GO:0009647: skotomorphogenesis | 5.46E-04 |
| 22 | GO:0043572: plastid fission | 5.46E-04 |
| 23 | GO:0045338: farnesyl diphosphate metabolic process | 5.46E-04 |
| 24 | GO:0010601: positive regulation of auxin biosynthetic process | 5.46E-04 |
| 25 | GO:0010182: sugar mediated signaling pathway | 6.09E-04 |
| 26 | GO:0019252: starch biosynthetic process | 6.99E-04 |
| 27 | GO:0009765: photosynthesis, light harvesting | 7.26E-04 |
| 28 | GO:0022622: root system development | 7.26E-04 |
| 29 | GO:0006564: L-serine biosynthetic process | 9.17E-04 |
| 30 | GO:0015995: chlorophyll biosynthetic process | 1.24E-03 |
| 31 | GO:0048280: vesicle fusion with Golgi apparatus | 1.34E-03 |
| 32 | GO:2000033: regulation of seed dormancy process | 1.34E-03 |
| 33 | GO:1901259: chloroplast rRNA processing | 1.34E-03 |
| 34 | GO:0010444: guard mother cell differentiation | 1.57E-03 |
| 35 | GO:0032880: regulation of protein localization | 1.57E-03 |
| 36 | GO:0048437: floral organ development | 1.57E-03 |
| 37 | GO:0005978: glycogen biosynthetic process | 1.81E-03 |
| 38 | GO:0006353: DNA-templated transcription, termination | 1.81E-03 |
| 39 | GO:0070413: trehalose metabolism in response to stress | 1.81E-03 |
| 40 | GO:0009657: plastid organization | 2.07E-03 |
| 41 | GO:0009638: phototropism | 2.61E-03 |
| 42 | GO:0045036: protein targeting to chloroplast | 2.90E-03 |
| 43 | GO:0010162: seed dormancy process | 2.90E-03 |
| 44 | GO:0006896: Golgi to vacuole transport | 2.90E-03 |
| 45 | GO:0005983: starch catabolic process | 3.50E-03 |
| 46 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.50E-03 |
| 47 | GO:0050826: response to freezing | 3.82E-03 |
| 48 | GO:2000012: regulation of auxin polar transport | 3.82E-03 |
| 49 | GO:0048467: gynoecium development | 4.15E-03 |
| 50 | GO:0010143: cutin biosynthetic process | 4.15E-03 |
| 51 | GO:0010020: chloroplast fission | 4.15E-03 |
| 52 | GO:0006071: glycerol metabolic process | 4.83E-03 |
| 53 | GO:0005992: trehalose biosynthetic process | 5.19E-03 |
| 54 | GO:0009768: photosynthesis, light harvesting in photosystem I | 5.55E-03 |
| 55 | GO:0006418: tRNA aminoacylation for protein translation | 5.55E-03 |
| 56 | GO:0061077: chaperone-mediated protein folding | 5.93E-03 |
| 57 | GO:0009790: embryo development | 6.13E-03 |
| 58 | GO:0016226: iron-sulfur cluster assembly | 6.31E-03 |
| 59 | GO:0009686: gibberellin biosynthetic process | 6.70E-03 |
| 60 | GO:0008284: positive regulation of cell proliferation | 7.51E-03 |
| 61 | GO:0016117: carotenoid biosynthetic process | 7.51E-03 |
| 62 | GO:0042147: retrograde transport, endosome to Golgi | 7.51E-03 |
| 63 | GO:0009416: response to light stimulus | 7.61E-03 |
| 64 | GO:0010118: stomatal movement | 7.93E-03 |
| 65 | GO:0009958: positive gravitropism | 8.35E-03 |
| 66 | GO:0010268: brassinosteroid homeostasis | 8.35E-03 |
| 67 | GO:0010154: fruit development | 8.35E-03 |
| 68 | GO:0051301: cell division | 8.49E-03 |
| 69 | GO:0006814: sodium ion transport | 8.79E-03 |
| 70 | GO:0009556: microsporogenesis | 9.23E-03 |
| 71 | GO:0006623: protein targeting to vacuole | 9.23E-03 |
| 72 | GO:0009791: post-embryonic development | 9.23E-03 |
| 73 | GO:0006891: intra-Golgi vesicle-mediated transport | 9.68E-03 |
| 74 | GO:0016132: brassinosteroid biosynthetic process | 9.68E-03 |
| 75 | GO:0010090: trichome morphogenesis | 1.06E-02 |
| 76 | GO:0009567: double fertilization forming a zygote and endosperm | 1.11E-02 |
| 77 | GO:0016125: sterol metabolic process | 1.11E-02 |
| 78 | GO:0009658: chloroplast organization | 1.12E-02 |
| 79 | GO:0010027: thylakoid membrane organization | 1.25E-02 |
| 80 | GO:0016126: sterol biosynthetic process | 1.25E-02 |
| 81 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.41E-02 |
| 82 | GO:0016049: cell growth | 1.46E-02 |
| 83 | GO:0048481: plant ovule development | 1.51E-02 |
| 84 | GO:0018298: protein-chromophore linkage | 1.51E-02 |
| 85 | GO:0009832: plant-type cell wall biogenesis | 1.57E-02 |
| 86 | GO:0009813: flavonoid biosynthetic process | 1.57E-02 |
| 87 | GO:0048527: lateral root development | 1.68E-02 |
| 88 | GO:0016051: carbohydrate biosynthetic process | 1.79E-02 |
| 89 | GO:0006897: endocytosis | 2.02E-02 |
| 90 | GO:0009640: photomorphogenesis | 2.14E-02 |
| 91 | GO:0006855: drug transmembrane transport | 2.39E-02 |
| 92 | GO:0006364: rRNA processing | 2.65E-02 |
| 93 | GO:0009585: red, far-red light phototransduction | 2.65E-02 |
| 94 | GO:0006857: oligopeptide transport | 2.78E-02 |
| 95 | GO:0048367: shoot system development | 3.05E-02 |
| 96 | GO:0005975: carbohydrate metabolic process | 3.14E-02 |
| 97 | GO:0055114: oxidation-reduction process | 3.22E-02 |
| 98 | GO:0009553: embryo sac development | 3.33E-02 |
| 99 | GO:0042744: hydrogen peroxide catabolic process | 4.38E-02 |
| 100 | GO:0006633: fatty acid biosynthetic process | 4.70E-02 |
| 101 | GO:0006413: translational initiation | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 2 | GO:0051060: pullulanase activity | 0.00E+00 |
| 3 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 4 | GO:0016630: protochlorophyllide reductase activity | 4.96E-07 |
| 5 | GO:0051777: ent-kaurenoate oxidase activity | 9.69E-05 |
| 6 | GO:0004856: xylulokinase activity | 9.69E-05 |
| 7 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 9.69E-05 |
| 8 | GO:0003774: motor activity | 2.19E-04 |
| 9 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 2.28E-04 |
| 10 | GO:0004617: phosphoglycerate dehydrogenase activity | 2.28E-04 |
| 11 | GO:0090729: toxin activity | 3.80E-04 |
| 12 | GO:0002161: aminoacyl-tRNA editing activity | 3.80E-04 |
| 13 | GO:0050833: pyruvate transmembrane transporter activity | 3.80E-04 |
| 14 | GO:0003883: CTP synthase activity | 5.46E-04 |
| 15 | GO:0008508: bile acid:sodium symporter activity | 5.46E-04 |
| 16 | GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity | 5.46E-04 |
| 17 | GO:0045430: chalcone isomerase activity | 7.26E-04 |
| 18 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 7.26E-04 |
| 19 | GO:0016279: protein-lysine N-methyltransferase activity | 7.26E-04 |
| 20 | GO:0043495: protein anchor | 7.26E-04 |
| 21 | GO:0016791: phosphatase activity | 8.97E-04 |
| 22 | GO:0003959: NADPH dehydrogenase activity | 9.17E-04 |
| 23 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 9.17E-04 |
| 24 | GO:0008237: metallopeptidase activity | 9.50E-04 |
| 25 | GO:0016597: amino acid binding | 1.00E-03 |
| 26 | GO:0016168: chlorophyll binding | 1.12E-03 |
| 27 | GO:0004556: alpha-amylase activity | 1.12E-03 |
| 28 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.12E-03 |
| 29 | GO:0004629: phospholipase C activity | 1.12E-03 |
| 30 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.12E-03 |
| 31 | GO:0004435: phosphatidylinositol phospholipase C activity | 1.34E-03 |
| 32 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.34E-03 |
| 33 | GO:0042802: identical protein binding | 1.34E-03 |
| 34 | GO:0004222: metalloendopeptidase activity | 1.50E-03 |
| 35 | GO:0019899: enzyme binding | 1.57E-03 |
| 36 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 2.33E-03 |
| 37 | GO:0015020: glucuronosyltransferase activity | 2.90E-03 |
| 38 | GO:0005525: GTP binding | 3.19E-03 |
| 39 | GO:0000049: tRNA binding | 3.50E-03 |
| 40 | GO:0008083: growth factor activity | 4.15E-03 |
| 41 | GO:0031409: pigment binding | 4.83E-03 |
| 42 | GO:0005215: transporter activity | 5.10E-03 |
| 43 | GO:0051536: iron-sulfur cluster binding | 5.19E-03 |
| 44 | GO:0005528: FK506 binding | 5.19E-03 |
| 45 | GO:0004176: ATP-dependent peptidase activity | 5.93E-03 |
| 46 | GO:0022891: substrate-specific transmembrane transporter activity | 6.70E-03 |
| 47 | GO:0004812: aminoacyl-tRNA ligase activity | 7.51E-03 |
| 48 | GO:0020037: heme binding | 8.74E-03 |
| 49 | GO:0019825: oxygen binding | 1.19E-02 |
| 50 | GO:0008375: acetylglucosaminyltransferase activity | 1.36E-02 |
| 51 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.51E-02 |
| 52 | GO:0015238: drug transmembrane transporter activity | 1.57E-02 |
| 53 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.68E-02 |
| 54 | GO:0004871: signal transducer activity | 1.75E-02 |
| 55 | GO:0005506: iron ion binding | 1.83E-02 |
| 56 | GO:0000149: SNARE binding | 1.91E-02 |
| 57 | GO:0003924: GTPase activity | 2.06E-02 |
| 58 | GO:0005484: SNAP receptor activity | 2.14E-02 |
| 59 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.39E-02 |
| 60 | GO:0051287: NAD binding | 2.46E-02 |
| 61 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.05E-02 |
| 62 | GO:0003779: actin binding | 3.33E-02 |
| 63 | GO:0016746: transferase activity, transferring acyl groups | 3.48E-02 |
| 64 | GO:0019843: rRNA binding | 4.00E-02 |
| 65 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.07E-02 |
| 66 | GO:0008565: protein transporter activity | 4.54E-02 |
| 67 | GO:0015297: antiporter activity | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010170: glucose-1-phosphate adenylyltransferase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.04E-09 |
| 3 | GO:0009534: chloroplast thylakoid | 6.01E-06 |
| 4 | GO:0031969: chloroplast membrane | 3.73E-05 |
| 5 | GO:0009570: chloroplast stroma | 6.24E-05 |
| 6 | GO:0016459: myosin complex | 1.23E-04 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 1.06E-03 |
| 8 | GO:0009941: chloroplast envelope | 1.38E-03 |
| 9 | GO:0012507: ER to Golgi transport vesicle membrane | 1.81E-03 |
| 10 | GO:0032040: small-subunit processome | 3.50E-03 |
| 11 | GO:0009706: chloroplast inner membrane | 4.20E-03 |
| 12 | GO:0030076: light-harvesting complex | 4.49E-03 |
| 13 | GO:0009543: chloroplast thylakoid lumen | 5.25E-03 |
| 14 | GO:0005623: cell | 5.39E-03 |
| 15 | GO:0042651: thylakoid membrane | 5.55E-03 |
| 16 | GO:0015935: small ribosomal subunit | 5.93E-03 |
| 17 | GO:0005789: endoplasmic reticulum membrane | 8.32E-03 |
| 18 | GO:0009523: photosystem II | 9.23E-03 |
| 19 | GO:0009579: thylakoid | 9.56E-03 |
| 20 | GO:0009707: chloroplast outer membrane | 1.51E-02 |
| 21 | GO:0005840: ribosome | 1.98E-02 |
| 22 | GO:0031902: late endosome membrane | 2.02E-02 |
| 23 | GO:0031977: thylakoid lumen | 2.02E-02 |
| 24 | GO:0031201: SNARE complex | 2.02E-02 |
| 25 | GO:0005886: plasma membrane | 3.58E-02 |
| 26 | GO:0010287: plastoglobule | 3.85E-02 |