Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G01910

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010081: regulation of inflorescence meristem growth0.00E+00
2GO:0098586: cellular response to virus0.00E+00
3GO:0071000: response to magnetism0.00E+00
4GO:0009583: detection of light stimulus0.00E+00
5GO:0010203: response to very low fluence red light stimulus0.00E+00
6GO:0007037: vacuolar phosphate transport0.00E+00
7GO:0017009: protein-phycocyanobilin linkage0.00E+00
8GO:0000372: Group I intron splicing0.00E+00
9GO:0033528: S-methylmethionine cycle0.00E+00
10GO:1905177: tracheary element differentiation0.00E+00
11GO:0006114: glycerol biosynthetic process0.00E+00
12GO:0006399: tRNA metabolic process0.00E+00
13GO:0045038: protein import into chloroplast thylakoid membrane1.04E-06
14GO:0000373: Group II intron splicing1.70E-05
15GO:0090351: seedling development8.48E-05
16GO:0009793: embryo development ending in seed dormancy1.49E-04
17GO:0051510: regulation of unidimensional cell growth2.51E-04
18GO:0006419: alanyl-tRNA aminoacylation3.09E-04
19GO:0015969: guanosine tetraphosphate metabolic process3.09E-04
20GO:0048657: anther wall tapetum cell differentiation3.09E-04
21GO:0000012: single strand break repair3.09E-04
22GO:0043266: regulation of potassium ion transport3.09E-04
23GO:0010080: regulation of floral meristem growth3.09E-04
24GO:1902025: nitrate import3.09E-04
25GO:0042547: cell wall modification involved in multidimensional cell growth3.09E-04
26GO:0015798: myo-inositol transport3.09E-04
27GO:0072387: flavin adenine dinucleotide metabolic process3.09E-04
28GO:0010201: response to continuous far red light stimulus by the high-irradiance response system3.09E-04
29GO:0043087: regulation of GTPase activity3.09E-04
30GO:2000021: regulation of ion homeostasis3.09E-04
31GO:0006436: tryptophanyl-tRNA aminoacylation3.09E-04
32GO:0090548: response to nitrate starvation3.09E-04
33GO:0000066: mitochondrial ornithine transport3.09E-04
34GO:1902458: positive regulation of stomatal opening3.09E-04
35GO:0045010: actin nucleation3.17E-04
36GO:0071482: cellular response to light stimulus3.89E-04
37GO:0009821: alkaloid biosynthetic process4.68E-04
38GO:0009638: phototropism5.53E-04
39GO:1903426: regulation of reactive oxygen species biosynthetic process6.76E-04
40GO:0010275: NAD(P)H dehydrogenase complex assembly6.76E-04
41GO:0010343: singlet oxygen-mediated programmed cell death6.76E-04
42GO:0043255: regulation of carbohydrate biosynthetic process6.76E-04
43GO:1901529: positive regulation of anion channel activity6.76E-04
44GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole6.76E-04
45GO:0046741: transport of virus in host, tissue to tissue6.76E-04
46GO:1900871: chloroplast mRNA modification6.76E-04
47GO:0010617: circadian regulation of calcium ion oscillation6.76E-04
48GO:0000256: allantoin catabolic process6.76E-04
49GO:0099402: plant organ development6.76E-04
50GO:0006435: threonyl-tRNA aminoacylation6.76E-04
51GO:0006352: DNA-templated transcription, initiation7.44E-04
52GO:0010207: photosystem II assembly1.08E-03
53GO:1902448: positive regulation of shade avoidance1.10E-03
54GO:0010136: ureide catabolic process1.10E-03
55GO:0017006: protein-tetrapyrrole linkage1.10E-03
56GO:0010623: programmed cell death involved in cell development1.10E-03
57GO:0010022: meristem determinacy1.10E-03
58GO:1901672: positive regulation of systemic acquired resistance1.10E-03
59GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.10E-03
60GO:0006696: ergosterol biosynthetic process1.10E-03
61GO:0005977: glycogen metabolic process1.10E-03
62GO:0009584: detection of visible light1.57E-03
63GO:0009226: nucleotide-sugar biosynthetic process1.57E-03
64GO:0006145: purine nucleobase catabolic process1.57E-03
65GO:1901332: negative regulation of lateral root development1.57E-03
66GO:0042989: sequestering of actin monomers1.57E-03
67GO:0043572: plastid fission1.57E-03
68GO:2001141: regulation of RNA biosynthetic process1.57E-03
69GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.57E-03
70GO:0042546: cell wall biogenesis1.79E-03
71GO:0051781: positive regulation of cell division2.11E-03
72GO:0048442: sepal development2.11E-03
73GO:0006661: phosphatidylinositol biosynthetic process2.11E-03
74GO:0006552: leucine catabolic process2.11E-03
75GO:0010508: positive regulation of autophagy2.11E-03
76GO:0071483: cellular response to blue light2.11E-03
77GO:1902347: response to strigolactone2.11E-03
78GO:0010021: amylopectin biosynthetic process2.11E-03
79GO:0016117: carotenoid biosynthetic process2.53E-03
80GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.53E-03
81GO:1902183: regulation of shoot apical meristem development2.69E-03
82GO:0016123: xanthophyll biosynthetic process2.69E-03
83GO:0010158: abaxial cell fate specification2.69E-03
84GO:0030041: actin filament polymerization2.69E-03
85GO:0010117: photoprotection2.69E-03
86GO:0046283: anthocyanin-containing compound metabolic process2.69E-03
87GO:0010268: brassinosteroid homeostasis2.94E-03
88GO:0045489: pectin biosynthetic process2.94E-03
89GO:0009658: chloroplast organization3.03E-03
90GO:0007059: chromosome segregation3.16E-03
91GO:0009646: response to absence of light3.16E-03
92GO:0060918: auxin transport3.32E-03
93GO:0009920: cell plate formation involved in plant-type cell wall biogenesis3.32E-03
94GO:1901371: regulation of leaf morphogenesis3.32E-03
95GO:0016132: brassinosteroid biosynthetic process3.63E-03
96GO:0007264: small GTPase mediated signal transduction3.88E-03
97GO:0010310: regulation of hydrogen peroxide metabolic process4.00E-03
98GO:0009612: response to mechanical stimulus4.00E-03
99GO:0010076: maintenance of floral meristem identity4.00E-03
100GO:0010244: response to low fluence blue light stimulus by blue low-fluence system4.00E-03
101GO:0017148: negative regulation of translation4.00E-03
102GO:0010090: trichome morphogenesis4.14E-03
103GO:0016125: sterol metabolic process4.40E-03
104GO:0009395: phospholipid catabolic process4.72E-03
105GO:0006614: SRP-dependent cotranslational protein targeting to membrane4.72E-03
106GO:0009645: response to low light intensity stimulus4.72E-03
107GO:0022904: respiratory electron transport chain4.72E-03
108GO:0006400: tRNA modification4.72E-03
109GO:0010161: red light signaling pathway4.72E-03
110GO:0016126: sterol biosynthetic process5.25E-03
111GO:0048564: photosystem I assembly5.48E-03
112GO:0042255: ribosome assembly5.48E-03
113GO:0006353: DNA-templated transcription, termination5.48E-03
114GO:2000070: regulation of response to water deprivation5.48E-03
115GO:0010492: maintenance of shoot apical meristem identity5.48E-03
116GO:0000105: histidine biosynthetic process5.48E-03
117GO:0071555: cell wall organization5.67E-03
118GO:0010411: xyloglucan metabolic process6.18E-03
119GO:0022900: electron transport chain6.28E-03
120GO:0009827: plant-type cell wall modification6.28E-03
121GO:0032544: plastid translation6.28E-03
122GO:0030244: cellulose biosynthetic process6.85E-03
123GO:0018298: protein-chromophore linkage6.85E-03
124GO:0046685: response to arsenic-containing substance7.12E-03
125GO:0090305: nucleic acid phosphodiester bond hydrolysis7.12E-03
126GO:0010206: photosystem II repair7.12E-03
127GO:2000024: regulation of leaf development7.12E-03
128GO:0048507: meristem development7.12E-03
129GO:0009834: plant-type secondary cell wall biogenesis7.56E-03
130GO:0010218: response to far red light7.56E-03
131GO:0009086: methionine biosynthetic process8.01E-03
132GO:0008202: steroid metabolic process8.01E-03
133GO:1900426: positive regulation of defense response to bacterium8.01E-03
134GO:0009637: response to blue light8.69E-03
135GO:0006259: DNA metabolic process8.92E-03
136GO:0048441: petal development8.92E-03
137GO:0006265: DNA topological change9.88E-03
138GO:0045037: protein import into chloroplast stroma1.09E-02
139GO:0010582: floral meristem determinacy1.09E-02
140GO:0009640: photomorphogenesis1.12E-02
141GO:0010114: response to red light1.12E-02
142GO:0006094: gluconeogenesis1.19E-02
143GO:0009767: photosynthetic electron transport chain1.19E-02
144GO:0009785: blue light signaling pathway1.19E-02
145GO:0030036: actin cytoskeleton organization1.19E-02
146GO:0010075: regulation of meristem growth1.19E-02
147GO:0009644: response to high light intensity1.22E-02
148GO:0006302: double-strand break repair1.30E-02
149GO:0048440: carpel development1.30E-02
150GO:0010020: chloroplast fission1.30E-02
151GO:0006468: protein phosphorylation1.32E-02
152GO:0042538: hyperosmotic salinity response1.41E-02
153GO:0006833: water transport1.52E-02
154GO:0009585: red, far-red light phototransduction1.52E-02
155GO:0009833: plant-type primary cell wall biogenesis1.52E-02
156GO:0009944: polarity specification of adaxial/abaxial axis1.63E-02
157GO:0007010: cytoskeleton organization1.63E-02
158GO:0006289: nucleotide-excision repair1.63E-02
159GO:2000377: regulation of reactive oxygen species metabolic process1.63E-02
160GO:0051302: regulation of cell division1.75E-02
161GO:0006418: tRNA aminoacylation for protein translation1.75E-02
162GO:0010073: meristem maintenance1.75E-02
163GO:0006825: copper ion transport1.75E-02
164GO:0010431: seed maturation1.87E-02
165GO:0015992: proton transport1.87E-02
166GO:0046777: protein autophosphorylation1.96E-02
167GO:0006508: proteolysis1.97E-02
168GO:0009814: defense response, incompatible interaction2.00E-02
169GO:0006730: one-carbon metabolic process2.00E-02
170GO:0031348: negative regulation of defense response2.00E-02
171GO:0010089: xylem development2.25E-02
172GO:0010584: pollen exine formation2.25E-02
173GO:0048443: stamen development2.25E-02
174GO:0019722: calcium-mediated signaling2.25E-02
175GO:0009306: protein secretion2.25E-02
176GO:0010118: stomatal movement2.52E-02
177GO:0008033: tRNA processing2.52E-02
178GO:0034220: ion transmembrane transport2.52E-02
179GO:0055085: transmembrane transport2.58E-02
180GO:0010154: fruit development2.66E-02
181GO:0010197: polar nucleus fusion2.66E-02
182GO:0046323: glucose import2.66E-02
183GO:0007018: microtubule-based movement2.80E-02
184GO:0042752: regulation of circadian rhythm2.80E-02
185GO:0009058: biosynthetic process2.86E-02
186GO:0006629: lipid metabolic process2.93E-02
187GO:0019252: starch biosynthetic process2.95E-02
188GO:0008654: phospholipid biosynthetic process2.95E-02
189GO:0000302: response to reactive oxygen species3.09E-02
190GO:0006397: mRNA processing3.09E-02
191GO:0010583: response to cyclopentenone3.24E-02
192GO:0016032: viral process3.24E-02
193GO:0032502: developmental process3.24E-02
194GO:0009630: gravitropism3.24E-02
195GO:0006413: translational initiation3.49E-02
196GO:0007267: cell-cell signaling3.70E-02
197GO:0009911: positive regulation of flower development4.02E-02
198GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.18E-02
199GO:0010029: regulation of seed germination4.18E-02
200GO:0007166: cell surface receptor signaling pathway4.27E-02
201GO:0048573: photoperiodism, flowering4.51E-02
202GO:0016311: dephosphorylation4.68E-02
203GO:0048481: plant ovule development4.85E-02
204GO:0009817: defense response to fungus, incompatible interaction4.85E-02
205GO:0009414: response to water deprivation4.90E-02
RankGO TermAdjusted P value
1GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
2GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity0.00E+00
3GO:0005048: signal sequence binding0.00E+00
4GO:0043136: glycerol-3-phosphatase activity0.00E+00
5GO:0000121: glycerol-1-phosphatase activity0.00E+00
6GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity0.00E+00
7GO:0004174: electron-transferring-flavoprotein dehydrogenase activity0.00E+00
8GO:0050613: delta14-sterol reductase activity0.00E+00
9GO:0071522: ureidoglycine aminohydrolase activity0.00E+00
10GO:0004561: alpha-N-acetylglucosaminidase activity0.00E+00
11GO:0048039: ubiquinone binding0.00E+00
12GO:0046905: phytoene synthase activity0.00E+00
13GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor0.00E+00
14GO:0004672: protein kinase activity2.60E-05
15GO:0016987: sigma factor activity6.18E-05
16GO:0001053: plastid sigma factor activity6.18E-05
17GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity3.09E-04
18GO:0004813: alanine-tRNA ligase activity3.09E-04
19GO:0005290: L-histidine transmembrane transporter activity3.09E-04
20GO:0004008: copper-exporting ATPase activity3.09E-04
21GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity3.09E-04
22GO:0051996: squalene synthase activity3.09E-04
23GO:0004830: tryptophan-tRNA ligase activity3.09E-04
24GO:0031516: far-red light photoreceptor activity3.09E-04
25GO:0003879: ATP phosphoribosyltransferase activity3.09E-04
26GO:0005525: GTP binding3.16E-04
27GO:0043022: ribosome binding3.17E-04
28GO:0016844: strictosidine synthase activity5.53E-04
29GO:0009977: proton motive force dependent protein transmembrane transporter activity6.76E-04
30GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity6.76E-04
31GO:0004829: threonine-tRNA ligase activity6.76E-04
32GO:0019156: isoamylase activity6.76E-04
33GO:0000064: L-ornithine transmembrane transporter activity6.76E-04
34GO:0008728: GTP diphosphokinase activity6.76E-04
35GO:0004310: farnesyl-diphosphate farnesyltransferase activity6.76E-04
36GO:0005366: myo-inositol:proton symporter activity6.76E-04
37GO:0048531: beta-1,3-galactosyltransferase activity6.76E-04
38GO:0010291: carotene beta-ring hydroxylase activity6.76E-04
39GO:0009883: red or far-red light photoreceptor activity6.76E-04
40GO:0004326: tetrahydrofolylpolyglutamate synthase activity6.76E-04
41GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.08E-03
42GO:0008430: selenium binding1.10E-03
43GO:0004180: carboxypeptidase activity1.10E-03
44GO:0032549: ribonucleoside binding1.10E-03
45GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.10E-03
46GO:0008020: G-protein coupled photoreceptor activity1.10E-03
47GO:0016805: dipeptidase activity1.10E-03
48GO:0015189: L-lysine transmembrane transporter activity1.57E-03
49GO:0005354: galactose transmembrane transporter activity1.57E-03
50GO:0009678: hydrogen-translocating pyrophosphatase activity1.57E-03
51GO:0015181: arginine transmembrane transporter activity1.57E-03
52GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.57E-03
53GO:0009882: blue light photoreceptor activity1.57E-03
54GO:0003924: GTPase activity1.88E-03
55GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.11E-03
56GO:0070628: proteasome binding2.11E-03
57GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity2.11E-03
58GO:0004506: squalene monooxygenase activity2.11E-03
59GO:0042277: peptide binding2.11E-03
60GO:0042802: identical protein binding2.25E-03
61GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.44E-03
62GO:0003899: DNA-directed 5'-3' RNA polymerase activity2.49E-03
63GO:0008374: O-acyltransferase activity2.69E-03
64GO:0003785: actin monomer binding2.69E-03
65GO:0046872: metal ion binding3.31E-03
66GO:0031593: polyubiquitin binding3.32E-03
67GO:0004556: alpha-amylase activity3.32E-03
68GO:0048038: quinone binding3.63E-03
69GO:0016762: xyloglucan:xyloglucosyl transferase activity3.63E-03
70GO:0004518: nuclease activity3.88E-03
71GO:0004656: procollagen-proline 4-dioxygenase activity4.00E-03
72GO:0009927: histidine phosphotransfer kinase activity4.00E-03
73GO:0004427: inorganic diphosphatase activity4.72E-03
74GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen5.38E-03
75GO:0008312: 7S RNA binding5.48E-03
76GO:0004871: signal transducer activity5.95E-03
77GO:0016798: hydrolase activity, acting on glycosyl bonds6.18E-03
78GO:0008142: oxysterol binding6.28E-03
79GO:0005375: copper ion transmembrane transporter activity6.28E-03
80GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity6.28E-03
81GO:0008236: serine-type peptidase activity6.51E-03
82GO:0015144: carbohydrate transmembrane transporter activity6.54E-03
83GO:0071949: FAD binding7.12E-03
84GO:0004675: transmembrane receptor protein serine/threonine kinase activity7.18E-03
85GO:0005351: sugar:proton symporter activity7.62E-03
86GO:0004743: pyruvate kinase activity8.01E-03
87GO:0030955: potassium ion binding8.01E-03
88GO:0004673: protein histidine kinase activity8.92E-03
89GO:0001054: RNA polymerase I activity9.88E-03
90GO:0000049: tRNA binding1.09E-02
91GO:0008081: phosphoric diester hydrolase activity1.19E-02
92GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.19E-02
93GO:0000155: phosphorelay sensor kinase activity1.19E-02
94GO:0004190: aspartic-type endopeptidase activity1.40E-02
95GO:0003690: double-stranded DNA binding1.57E-02
96GO:0031418: L-ascorbic acid binding1.63E-02
97GO:0043130: ubiquitin binding1.63E-02
98GO:0005506: iron ion binding1.70E-02
99GO:0005515: protein binding2.02E-02
100GO:0030570: pectate lyase activity2.12E-02
101GO:0016760: cellulose synthase (UDP-forming) activity2.12E-02
102GO:0003727: single-stranded RNA binding2.25E-02
103GO:0004812: aminoacyl-tRNA ligase activity2.39E-02
104GO:0042803: protein homodimerization activity2.39E-02
105GO:0016787: hydrolase activity2.46E-02
106GO:0016301: kinase activity2.50E-02
107GO:0008536: Ran GTPase binding2.66E-02
108GO:0004527: exonuclease activity2.66E-02
109GO:0005355: glucose transmembrane transporter activity2.80E-02
110GO:0010181: FMN binding2.80E-02
111GO:0016829: lyase activity2.93E-02
112GO:0019901: protein kinase binding2.95E-02
113GO:0004252: serine-type endopeptidase activity3.01E-02
114GO:0003684: damaged DNA binding3.55E-02
115GO:0016759: cellulose synthase activity3.55E-02
116GO:0008237: metallopeptidase activity3.70E-02
117GO:0016413: O-acetyltransferase activity3.86E-02
118GO:0016597: amino acid binding3.86E-02
119GO:0015250: water channel activity4.02E-02
120GO:0003743: translation initiation factor activity4.36E-02
121GO:0005524: ATP binding4.54E-02
RankGO TermAdjusted P value
1GO:0017133: mitochondrial electron transfer flavoprotein complex0.00E+00
2GO:0010368: chloroplast isoamylase complex0.00E+00
3GO:0009507: chloroplast2.99E-16
4GO:0080085: signal recognition particle, chloroplast targeting4.35E-06
5GO:0009570: chloroplast stroma7.55E-05
6GO:0009535: chloroplast thylakoid membrane1.33E-04
7GO:0031209: SCAR complex1.41E-04
8GO:0005773: vacuole2.93E-04
9GO:0005786: signal recognition particle, endoplasmic reticulum targeting3.89E-04
10GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)4.68E-04
11GO:0046658: anchored component of plasma membrane4.92E-04
12GO:0016604: nuclear body5.53E-04
13GO:0030529: intracellular ribonucleoprotein complex6.61E-04
14GO:0033281: TAT protein transport complex1.10E-03
15GO:0016605: PML body1.10E-03
16GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)2.11E-03
17GO:0030660: Golgi-associated vesicle membrane2.11E-03
18GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane2.11E-03
19GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane5.48E-03
20GO:0031305: integral component of mitochondrial inner membrane5.48E-03
21GO:0005736: DNA-directed RNA polymerase I complex7.12E-03
22GO:0009705: plant-type vacuole membrane7.85E-03
23GO:0005740: mitochondrial envelope8.92E-03
24GO:0005765: lysosomal membrane9.88E-03
25GO:0005886: plasma membrane1.05E-02
26GO:0031225: anchored component of membrane1.12E-02
27GO:0005578: proteinaceous extracellular matrix1.19E-02
28GO:0009574: preprophase band1.19E-02
29GO:0005938: cell cortex1.19E-02
30GO:0005856: cytoskeleton1.26E-02
31GO:0030176: integral component of endoplasmic reticulum membrane1.40E-02
32GO:0005768: endosome1.46E-02
33GO:0042651: thylakoid membrane1.75E-02
34GO:0009532: plastid stroma1.87E-02
35GO:0015629: actin cytoskeleton2.12E-02
36GO:0005871: kinesin complex2.39E-02
37GO:0009505: plant-type cell wall2.57E-02
38GO:0005623: cell2.79E-02
39GO:0009295: nucleoid3.70E-02
40GO:0009941: chloroplast envelope4.64E-02
41GO:0005783: endoplasmic reticulum4.83E-02
42GO:0019005: SCF ubiquitin ligase complex4.85E-02
43GO:0009707: chloroplast outer membrane4.85E-02
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Gene type



Gene DE type