| Rank | GO Term | Adjusted P value |
|---|
| 1 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 2 | GO:0008298: intracellular mRNA localization | 0.00E+00 |
| 3 | GO:1904964: positive regulation of phytol biosynthetic process | 0.00E+00 |
| 4 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 0.00E+00 |
| 5 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 6 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 7 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 8 | GO:0042407: cristae formation | 0.00E+00 |
| 9 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 10 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 11 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 12 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 13 | GO:1905157: positive regulation of photosynthesis | 0.00E+00 |
| 14 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 15 | GO:0031222: arabinan catabolic process | 0.00E+00 |
| 16 | GO:0010059: positive regulation of atrichoblast fate specification | 0.00E+00 |
| 17 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 18 | GO:0017038: protein import | 0.00E+00 |
| 19 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 20 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 21 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 22 | GO:0043392: negative regulation of DNA binding | 0.00E+00 |
| 23 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 24 | GO:0006849: plasma membrane pyruvate transport | 0.00E+00 |
| 25 | GO:1904966: positive regulation of vitamin E biosynthetic process | 0.00E+00 |
| 26 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 27 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 28 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 29 | GO:1901259: chloroplast rRNA processing | 1.70E-08 |
| 30 | GO:0009658: chloroplast organization | 4.70E-08 |
| 31 | GO:0010027: thylakoid membrane organization | 1.70E-06 |
| 32 | GO:0009657: plastid organization | 8.26E-06 |
| 33 | GO:0015979: photosynthesis | 1.58E-05 |
| 34 | GO:0015995: chlorophyll biosynthetic process | 3.62E-05 |
| 35 | GO:0018026: peptidyl-lysine monomethylation | 4.14E-05 |
| 36 | GO:0005983: starch catabolic process | 4.82E-05 |
| 37 | GO:0048437: floral organ development | 1.01E-04 |
| 38 | GO:0032502: developmental process | 1.07E-04 |
| 39 | GO:0009416: response to light stimulus | 1.14E-04 |
| 40 | GO:0032544: plastid translation | 1.94E-04 |
| 41 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.57E-04 |
| 42 | GO:0016556: mRNA modification | 2.57E-04 |
| 43 | GO:0046739: transport of virus in multicellular host | 2.57E-04 |
| 44 | GO:0031425: chloroplast RNA processing | 3.23E-04 |
| 45 | GO:0006021: inositol biosynthetic process | 4.23E-04 |
| 46 | GO:0009765: photosynthesis, light harvesting | 4.23E-04 |
| 47 | GO:0045038: protein import into chloroplast thylakoid membrane | 6.24E-04 |
| 48 | GO:0009742: brassinosteroid mediated signaling pathway | 7.64E-04 |
| 49 | GO:0010207: photosystem II assembly | 8.11E-04 |
| 50 | GO:1901657: glycosyl compound metabolic process | 8.30E-04 |
| 51 | GO:0042793: transcription from plastid promoter | 8.61E-04 |
| 52 | GO:0009959: negative gravitropism | 8.61E-04 |
| 53 | GO:0010480: microsporocyte differentiation | 1.01E-03 |
| 54 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 1.01E-03 |
| 55 | GO:0006659: phosphatidylserine biosynthetic process | 1.01E-03 |
| 56 | GO:0042371: vitamin K biosynthetic process | 1.01E-03 |
| 57 | GO:0043686: co-translational protein modification | 1.01E-03 |
| 58 | GO:0080112: seed growth | 1.01E-03 |
| 59 | GO:2000021: regulation of ion homeostasis | 1.01E-03 |
| 60 | GO:0005980: glycogen catabolic process | 1.01E-03 |
| 61 | GO:0030198: extracellular matrix organization | 1.01E-03 |
| 62 | GO:0043007: maintenance of rDNA | 1.01E-03 |
| 63 | GO:0051247: positive regulation of protein metabolic process | 1.01E-03 |
| 64 | GO:1902458: positive regulation of stomatal opening | 1.01E-03 |
| 65 | GO:0034337: RNA folding | 1.01E-03 |
| 66 | GO:0015904: tetracycline transport | 1.01E-03 |
| 67 | GO:0000476: maturation of 4.5S rRNA | 1.01E-03 |
| 68 | GO:0009443: pyridoxal 5'-phosphate salvage | 1.01E-03 |
| 69 | GO:2000905: negative regulation of starch metabolic process | 1.01E-03 |
| 70 | GO:0000967: rRNA 5'-end processing | 1.01E-03 |
| 71 | GO:0005991: trehalose metabolic process | 1.01E-03 |
| 72 | GO:1905039: carboxylic acid transmembrane transport | 1.01E-03 |
| 73 | GO:1905200: gibberellic acid transmembrane transport | 1.01E-03 |
| 74 | GO:0000305: response to oxygen radical | 1.01E-03 |
| 75 | GO:0000023: maltose metabolic process | 1.01E-03 |
| 76 | GO:1902478: negative regulation of defense response to bacterium, incompatible interaction | 1.01E-03 |
| 77 | GO:0043266: regulation of potassium ion transport | 1.01E-03 |
| 78 | GO:0010063: positive regulation of trichoblast fate specification | 1.01E-03 |
| 79 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 1.01E-03 |
| 80 | GO:0000025: maltose catabolic process | 1.01E-03 |
| 81 | GO:0042372: phylloquinone biosynthetic process | 1.13E-03 |
| 82 | GO:0009955: adaxial/abaxial pattern specification | 1.13E-03 |
| 83 | GO:0046620: regulation of organ growth | 1.81E-03 |
| 84 | GO:0006353: DNA-templated transcription, termination | 1.81E-03 |
| 85 | GO:0048564: photosystem I assembly | 1.81E-03 |
| 86 | GO:0071497: cellular response to freezing | 2.21E-03 |
| 87 | GO:0051645: Golgi localization | 2.21E-03 |
| 88 | GO:1900033: negative regulation of trichome patterning | 2.21E-03 |
| 89 | GO:0042325: regulation of phosphorylation | 2.21E-03 |
| 90 | GO:0060359: response to ammonium ion | 2.21E-03 |
| 91 | GO:1904143: positive regulation of carotenoid biosynthetic process | 2.21E-03 |
| 92 | GO:0001682: tRNA 5'-leader removal | 2.21E-03 |
| 93 | GO:0006423: cysteinyl-tRNA aminoacylation | 2.21E-03 |
| 94 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 2.21E-03 |
| 95 | GO:0006568: tryptophan metabolic process | 2.21E-03 |
| 96 | GO:0009629: response to gravity | 2.21E-03 |
| 97 | GO:0010024: phytochromobilin biosynthetic process | 2.21E-03 |
| 98 | GO:0034470: ncRNA processing | 2.21E-03 |
| 99 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.21E-03 |
| 100 | GO:0007154: cell communication | 2.21E-03 |
| 101 | GO:0060151: peroxisome localization | 2.21E-03 |
| 102 | GO:0010497: plasmodesmata-mediated intercellular transport | 2.22E-03 |
| 103 | GO:0071482: cellular response to light stimulus | 2.22E-03 |
| 104 | GO:0006662: glycerol ether metabolic process | 3.02E-03 |
| 105 | GO:0010182: sugar mediated signaling pathway | 3.02E-03 |
| 106 | GO:0010305: leaf vascular tissue pattern formation | 3.02E-03 |
| 107 | GO:1900865: chloroplast RNA modification | 3.17E-03 |
| 108 | GO:0019252: starch biosynthetic process | 3.63E-03 |
| 109 | GO:0006696: ergosterol biosynthetic process | 3.67E-03 |
| 110 | GO:0043157: response to cation stress | 3.67E-03 |
| 111 | GO:0006788: heme oxidation | 3.67E-03 |
| 112 | GO:0051646: mitochondrion localization | 3.67E-03 |
| 113 | GO:0005977: glycogen metabolic process | 3.67E-03 |
| 114 | GO:0048586: regulation of long-day photoperiodism, flowering | 3.67E-03 |
| 115 | GO:0006954: inflammatory response | 3.67E-03 |
| 116 | GO:0034051: negative regulation of plant-type hypersensitive response | 3.67E-03 |
| 117 | GO:0033591: response to L-ascorbic acid | 3.67E-03 |
| 118 | GO:0048281: inflorescence morphogenesis | 3.67E-03 |
| 119 | GO:0090436: leaf pavement cell development | 3.67E-03 |
| 120 | GO:0006415: translational termination | 4.31E-03 |
| 121 | GO:0019684: photosynthesis, light reaction | 4.31E-03 |
| 122 | GO:0043572: plastid fission | 5.36E-03 |
| 123 | GO:2001141: regulation of RNA biosynthetic process | 5.36E-03 |
| 124 | GO:0090308: regulation of methylation-dependent chromatin silencing | 5.36E-03 |
| 125 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 5.36E-03 |
| 126 | GO:0010148: transpiration | 5.36E-03 |
| 127 | GO:0045338: farnesyl diphosphate metabolic process | 5.36E-03 |
| 128 | GO:0006166: purine ribonucleoside salvage | 5.36E-03 |
| 129 | GO:0010071: root meristem specification | 5.36E-03 |
| 130 | GO:0006020: inositol metabolic process | 5.36E-03 |
| 131 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 5.36E-03 |
| 132 | GO:0010306: rhamnogalacturonan II biosynthetic process | 5.36E-03 |
| 133 | GO:0007231: osmosensory signaling pathway | 5.36E-03 |
| 134 | GO:0009102: biotin biosynthetic process | 5.36E-03 |
| 135 | GO:0010731: protein glutathionylation | 5.36E-03 |
| 136 | GO:0009152: purine ribonucleotide biosynthetic process | 5.36E-03 |
| 137 | GO:0010601: positive regulation of auxin biosynthetic process | 5.36E-03 |
| 138 | GO:0046653: tetrahydrofolate metabolic process | 5.36E-03 |
| 139 | GO:0010239: chloroplast mRNA processing | 5.36E-03 |
| 140 | GO:0006168: adenine salvage | 5.36E-03 |
| 141 | GO:0010588: cotyledon vascular tissue pattern formation | 5.64E-03 |
| 142 | GO:2000012: regulation of auxin polar transport | 5.64E-03 |
| 143 | GO:0009767: photosynthetic electron transport chain | 5.64E-03 |
| 144 | GO:0030048: actin filament-based movement | 5.64E-03 |
| 145 | GO:0048467: gynoecium development | 6.38E-03 |
| 146 | GO:0022622: root system development | 7.26E-03 |
| 147 | GO:0010021: amylopectin biosynthetic process | 7.26E-03 |
| 148 | GO:0006221: pyrimidine nucleotide biosynthetic process | 7.26E-03 |
| 149 | GO:1901141: regulation of lignin biosynthetic process | 7.26E-03 |
| 150 | GO:0048629: trichome patterning | 7.26E-03 |
| 151 | GO:0006749: glutathione metabolic process | 7.26E-03 |
| 152 | GO:0010109: regulation of photosynthesis | 7.26E-03 |
| 153 | GO:0010107: potassium ion import | 7.26E-03 |
| 154 | GO:0033500: carbohydrate homeostasis | 7.26E-03 |
| 155 | GO:0006546: glycine catabolic process | 7.26E-03 |
| 156 | GO:0042274: ribosomal small subunit biogenesis | 7.26E-03 |
| 157 | GO:2000306: positive regulation of photomorphogenesis | 7.26E-03 |
| 158 | GO:0006109: regulation of carbohydrate metabolic process | 7.26E-03 |
| 159 | GO:0009451: RNA modification | 7.46E-03 |
| 160 | GO:0048367: shoot system development | 8.34E-03 |
| 161 | GO:0018298: protein-chromophore linkage | 9.02E-03 |
| 162 | GO:0010236: plastoquinone biosynthetic process | 9.37E-03 |
| 163 | GO:0031365: N-terminal protein amino acid modification | 9.37E-03 |
| 164 | GO:0044209: AMP salvage | 9.37E-03 |
| 165 | GO:0032543: mitochondrial translation | 9.37E-03 |
| 166 | GO:0098719: sodium ion import across plasma membrane | 9.37E-03 |
| 167 | GO:0006564: L-serine biosynthetic process | 9.37E-03 |
| 168 | GO:0006508: proteolysis | 9.56E-03 |
| 169 | GO:0009813: flavonoid biosynthetic process | 9.61E-03 |
| 170 | GO:0006418: tRNA aminoacylation for protein translation | 9.85E-03 |
| 171 | GO:0009768: photosynthesis, light harvesting in photosystem I | 9.85E-03 |
| 172 | GO:0061077: chaperone-mediated protein folding | 1.09E-02 |
| 173 | GO:0009643: photosynthetic acclimation | 1.17E-02 |
| 174 | GO:0016554: cytidine to uridine editing | 1.17E-02 |
| 175 | GO:0010405: arabinogalactan protein metabolic process | 1.17E-02 |
| 176 | GO:0032973: amino acid export | 1.17E-02 |
| 177 | GO:0006751: glutathione catabolic process | 1.17E-02 |
| 178 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.17E-02 |
| 179 | GO:0000741: karyogamy | 1.17E-02 |
| 180 | GO:0046855: inositol phosphate dephosphorylation | 1.17E-02 |
| 181 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.17E-02 |
| 182 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.17E-02 |
| 183 | GO:0010190: cytochrome b6f complex assembly | 1.17E-02 |
| 184 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.17E-02 |
| 185 | GO:0006730: one-carbon metabolic process | 1.19E-02 |
| 186 | GO:0009686: gibberellin biosynthetic process | 1.30E-02 |
| 187 | GO:0034599: cellular response to oxidative stress | 1.30E-02 |
| 188 | GO:0030488: tRNA methylation | 1.42E-02 |
| 189 | GO:0010189: vitamin E biosynthetic process | 1.42E-02 |
| 190 | GO:0042026: protein refolding | 1.42E-02 |
| 191 | GO:2000033: regulation of seed dormancy process | 1.42E-02 |
| 192 | GO:0080086: stamen filament development | 1.42E-02 |
| 193 | GO:0006458: 'de novo' protein folding | 1.42E-02 |
| 194 | GO:0017148: negative regulation of translation | 1.42E-02 |
| 195 | GO:0048280: vesicle fusion with Golgi apparatus | 1.42E-02 |
| 196 | GO:0048509: regulation of meristem development | 1.42E-02 |
| 197 | GO:0016042: lipid catabolic process | 1.51E-02 |
| 198 | GO:0009409: response to cold | 1.63E-02 |
| 199 | GO:0010087: phloem or xylem histogenesis | 1.67E-02 |
| 200 | GO:0080022: primary root development | 1.67E-02 |
| 201 | GO:0030307: positive regulation of cell growth | 1.68E-02 |
| 202 | GO:0010103: stomatal complex morphogenesis | 1.68E-02 |
| 203 | GO:0032880: regulation of protein localization | 1.68E-02 |
| 204 | GO:0009769: photosynthesis, light harvesting in photosystem II | 1.68E-02 |
| 205 | GO:0010161: red light signaling pathway | 1.68E-02 |
| 206 | GO:0070370: cellular heat acclimation | 1.68E-02 |
| 207 | GO:0009772: photosynthetic electron transport in photosystem II | 1.68E-02 |
| 208 | GO:0043090: amino acid import | 1.68E-02 |
| 209 | GO:0009645: response to low light intensity stimulus | 1.68E-02 |
| 210 | GO:0010444: guard mother cell differentiation | 1.68E-02 |
| 211 | GO:0006397: mRNA processing | 1.73E-02 |
| 212 | GO:0010197: polar nucleus fusion | 1.80E-02 |
| 213 | GO:0009741: response to brassinosteroid | 1.80E-02 |
| 214 | GO:0009958: positive gravitropism | 1.80E-02 |
| 215 | GO:0009790: embryo development | 1.88E-02 |
| 216 | GO:0006814: sodium ion transport | 1.94E-02 |
| 217 | GO:0009646: response to absence of light | 1.94E-02 |
| 218 | GO:2000070: regulation of response to water deprivation | 1.96E-02 |
| 219 | GO:0055075: potassium ion homeostasis | 1.96E-02 |
| 220 | GO:0000105: histidine biosynthetic process | 1.96E-02 |
| 221 | GO:0042255: ribosome assembly | 1.96E-02 |
| 222 | GO:0070413: trehalose metabolism in response to stress | 1.96E-02 |
| 223 | GO:0052543: callose deposition in cell wall | 1.96E-02 |
| 224 | GO:0007155: cell adhesion | 1.96E-02 |
| 225 | GO:0009690: cytokinin metabolic process | 1.96E-02 |
| 226 | GO:0006605: protein targeting | 1.96E-02 |
| 227 | GO:0010078: maintenance of root meristem identity | 1.96E-02 |
| 228 | GO:0006855: drug transmembrane transport | 2.06E-02 |
| 229 | GO:0009791: post-embryonic development | 2.08E-02 |
| 230 | GO:0008654: phospholipid biosynthetic process | 2.08E-02 |
| 231 | GO:0005975: carbohydrate metabolic process | 2.19E-02 |
| 232 | GO:0040008: regulation of growth | 2.25E-02 |
| 233 | GO:0007186: G-protein coupled receptor signaling pathway | 2.26E-02 |
| 234 | GO:0043562: cellular response to nitrogen levels | 2.26E-02 |
| 235 | GO:0001558: regulation of cell growth | 2.26E-02 |
| 236 | GO:0010099: regulation of photomorphogenesis | 2.26E-02 |
| 237 | GO:0015996: chlorophyll catabolic process | 2.26E-02 |
| 238 | GO:0010100: negative regulation of photomorphogenesis | 2.26E-02 |
| 239 | GO:0010583: response to cyclopentenone | 2.38E-02 |
| 240 | GO:0010090: trichome morphogenesis | 2.54E-02 |
| 241 | GO:0000902: cell morphogenesis | 2.57E-02 |
| 242 | GO:0048507: meristem development | 2.57E-02 |
| 243 | GO:0009821: alkaloid biosynthetic process | 2.57E-02 |
| 244 | GO:0010206: photosystem II repair | 2.57E-02 |
| 245 | GO:0080144: amino acid homeostasis | 2.57E-02 |
| 246 | GO:0090333: regulation of stomatal closure | 2.57E-02 |
| 247 | GO:0046685: response to arsenic-containing substance | 2.57E-02 |
| 248 | GO:0046916: cellular transition metal ion homeostasis | 2.57E-02 |
| 249 | GO:0006783: heme biosynthetic process | 2.57E-02 |
| 250 | GO:0051453: regulation of intracellular pH | 2.90E-02 |
| 251 | GO:0009638: phototropism | 2.90E-02 |
| 252 | GO:0043067: regulation of programmed cell death | 2.90E-02 |
| 253 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.90E-02 |
| 254 | GO:0045454: cell redox homeostasis | 3.01E-02 |
| 255 | GO:0009793: embryo development ending in seed dormancy | 3.21E-02 |
| 256 | GO:0010162: seed dormancy process | 3.24E-02 |
| 257 | GO:0006896: Golgi to vacuole transport | 3.24E-02 |
| 258 | GO:0006782: protoporphyrinogen IX biosynthetic process | 3.24E-02 |
| 259 | GO:0045036: protein targeting to chloroplast | 3.24E-02 |
| 260 | GO:0009641: shade avoidance | 3.24E-02 |
| 261 | GO:0009299: mRNA transcription | 3.24E-02 |
| 262 | GO:0010029: regulation of seed germination | 3.42E-02 |
| 263 | GO:0009740: gibberellic acid mediated signaling pathway | 3.57E-02 |
| 264 | GO:0006816: calcium ion transport | 3.59E-02 |
| 265 | GO:0048229: gametophyte development | 3.59E-02 |
| 266 | GO:0009773: photosynthetic electron transport in photosystem I | 3.59E-02 |
| 267 | GO:0015770: sucrose transport | 3.59E-02 |
| 268 | GO:0010216: maintenance of DNA methylation | 3.59E-02 |
| 269 | GO:0009684: indoleacetic acid biosynthetic process | 3.59E-02 |
| 270 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.59E-02 |
| 271 | GO:0010015: root morphogenesis | 3.59E-02 |
| 272 | GO:0009073: aromatic amino acid family biosynthetic process | 3.59E-02 |
| 273 | GO:0043085: positive regulation of catalytic activity | 3.59E-02 |
| 274 | GO:0000038: very long-chain fatty acid metabolic process | 3.59E-02 |
| 275 | GO:0006352: DNA-templated transcription, initiation | 3.59E-02 |
| 276 | GO:0009735: response to cytokinin | 3.94E-02 |
| 277 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.95E-02 |
| 278 | GO:0045037: protein import into chloroplast stroma | 3.95E-02 |
| 279 | GO:0006790: sulfur compound metabolic process | 3.95E-02 |
| 280 | GO:0006396: RNA processing | 3.99E-02 |
| 281 | GO:0006810: transport | 4.17E-02 |
| 282 | GO:0009817: defense response to fungus, incompatible interaction | 4.21E-02 |
| 283 | GO:0048481: plant ovule development | 4.21E-02 |
| 284 | GO:0006006: glucose metabolic process | 4.33E-02 |
| 285 | GO:0050826: response to freezing | 4.33E-02 |
| 286 | GO:0010102: lateral root morphogenesis | 4.33E-02 |
| 287 | GO:0009718: anthocyanin-containing compound biosynthetic process | 4.33E-02 |
| 288 | GO:0010075: regulation of meristem growth | 4.33E-02 |
| 289 | GO:0009725: response to hormone | 4.33E-02 |
| 290 | GO:0010628: positive regulation of gene expression | 4.33E-02 |
| 291 | GO:0010143: cutin biosynthetic process | 4.72E-02 |
| 292 | GO:0010020: chloroplast fission | 4.72E-02 |
| 293 | GO:0009266: response to temperature stimulus | 4.72E-02 |
| 294 | GO:0009934: regulation of meristem structural organization | 4.72E-02 |
| 295 | GO:0009733: response to auxin | 4.75E-02 |
| 296 | GO:0048527: lateral root development | 4.86E-02 |