Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G80770

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015717: triose phosphate transport0.00E+00
2GO:0046471: phosphatidylglycerol metabolic process0.00E+00
3GO:0018023: peptidyl-lysine trimethylation0.00E+00
4GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process0.00E+00
5GO:1905157: positive regulation of photosynthesis0.00E+00
6GO:0006429: leucyl-tRNA aminoacylation0.00E+00
7GO:0006849: plasma membrane pyruvate transport0.00E+00
8GO:1901918: negative regulation of exoribonuclease activity0.00E+00
9GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
10GO:0015742: alpha-ketoglutarate transport0.00E+00
11GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
12GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
13GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
14GO:0016118: carotenoid catabolic process0.00E+00
15GO:1901259: chloroplast rRNA processing3.68E-08
16GO:0009773: photosynthetic electron transport in photosystem I1.13E-06
17GO:0015995: chlorophyll biosynthetic process7.23E-06
18GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly4.12E-05
19GO:0015994: chlorophyll metabolic process7.33E-05
20GO:0009643: photosynthetic acclimation1.66E-04
21GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.66E-04
22GO:0006418: tRNA aminoacylation for protein translation1.68E-04
23GO:0042371: vitamin K biosynthetic process3.42E-04
24GO:0043686: co-translational protein modification3.42E-04
25GO:0043007: maintenance of rDNA3.42E-04
26GO:0010028: xanthophyll cycle3.42E-04
27GO:0034337: RNA folding3.42E-04
28GO:0005991: trehalose metabolic process3.42E-04
29GO:0000476: maturation of 4.5S rRNA3.42E-04
30GO:0000967: rRNA 5'-end processing3.42E-04
31GO:0080112: seed growth3.42E-04
32GO:0005980: glycogen catabolic process3.42E-04
33GO:1905039: carboxylic acid transmembrane transport3.42E-04
34GO:1905200: gibberellic acid transmembrane transport3.42E-04
35GO:0015979: photosynthesis3.58E-04
36GO:0032544: plastid translation4.51E-04
37GO:0009657: plastid organization4.51E-04
38GO:0018026: peptidyl-lysine monomethylation7.45E-04
39GO:0060151: peroxisome localization7.45E-04
40GO:0016122: xanthophyll metabolic process7.45E-04
41GO:0016121: carotene catabolic process7.45E-04
42GO:0034470: ncRNA processing7.45E-04
43GO:0051645: Golgi localization7.45E-04
44GO:0016124: xanthophyll catabolic process7.45E-04
45GO:0010027: thylakoid membrane organization7.97E-04
46GO:0009658: chloroplast organization8.48E-04
47GO:0030048: actin filament-based movement1.11E-03
48GO:0090436: leaf pavement cell development1.21E-03
49GO:0035436: triose phosphate transmembrane transport1.21E-03
50GO:0006696: ergosterol biosynthetic process1.21E-03
51GO:0009405: pathogenesis1.21E-03
52GO:0090391: granum assembly1.21E-03
53GO:0051646: mitochondrion localization1.21E-03
54GO:0048467: gynoecium development1.25E-03
55GO:0043572: plastid fission1.74E-03
56GO:1902358: sulfate transmembrane transport1.74E-03
57GO:0045338: farnesyl diphosphate metabolic process1.74E-03
58GO:0006020: inositol metabolic process1.74E-03
59GO:0071484: cellular response to light intensity1.74E-03
60GO:0009152: purine ribonucleotide biosynthetic process1.74E-03
61GO:0015729: oxaloacetate transport1.74E-03
62GO:0010601: positive regulation of auxin biosynthetic process1.74E-03
63GO:0046653: tetrahydrofolate metabolic process1.74E-03
64GO:0009052: pentose-phosphate shunt, non-oxidative branch1.74E-03
65GO:0010731: protein glutathionylation1.74E-03
66GO:0009768: photosynthesis, light harvesting in photosystem I1.90E-03
67GO:0010114: response to red light2.06E-03
68GO:0016114: terpenoid biosynthetic process2.09E-03
69GO:0005975: carbohydrate metabolic process2.09E-03
70GO:0061077: chaperone-mediated protein folding2.09E-03
71GO:0015713: phosphoglycerate transport2.33E-03
72GO:0019676: ammonia assimilation cycle2.33E-03
73GO:0015743: malate transport2.33E-03
74GO:0009765: photosynthesis, light harvesting2.33E-03
75GO:0006021: inositol biosynthetic process2.33E-03
76GO:0009306: protein secretion2.71E-03
77GO:0032543: mitochondrial translation2.98E-03
78GO:0006656: phosphatidylcholine biosynthetic process2.98E-03
79GO:0006564: L-serine biosynthetic process2.98E-03
80GO:0010236: plastoquinone biosynthetic process2.98E-03
81GO:0031365: N-terminal protein amino acid modification2.98E-03
82GO:0071423: malate transmembrane transport2.98E-03
83GO:0006814: sodium ion transport3.67E-03
84GO:0000741: karyogamy3.68E-03
85GO:0009228: thiamine biosynthetic process3.68E-03
86GO:0046855: inositol phosphate dephosphorylation3.68E-03
87GO:0010304: PSII associated light-harvesting complex II catabolic process3.68E-03
88GO:0000470: maturation of LSU-rRNA3.68E-03
89GO:1902456: regulation of stomatal opening3.68E-03
90GO:0010190: cytochrome b6f complex assembly3.68E-03
91GO:0019252: starch biosynthetic process3.94E-03
92GO:0048280: vesicle fusion with Golgi apparatus4.43E-03
93GO:0009955: adaxial/abaxial pattern specification4.43E-03
94GO:0042372: phylloquinone biosynthetic process4.43E-03
95GO:1901657: glycosyl compound metabolic process4.80E-03
96GO:0009772: photosynthetic electron transport in photosystem II5.23E-03
97GO:0048437: floral organ development5.23E-03
98GO:0008272: sulfate transport5.23E-03
99GO:0009769: photosynthesis, light harvesting in photosystem II5.23E-03
100GO:0009645: response to low light intensity stimulus5.23E-03
101GO:0055114: oxidation-reduction process5.85E-03
102GO:0006353: DNA-templated transcription, termination6.08E-03
103GO:0070413: trehalose metabolism in response to stress6.08E-03
104GO:0010078: maintenance of root meristem identity6.08E-03
105GO:0052543: callose deposition in cell wall6.08E-03
106GO:0043562: cellular response to nitrogen levels6.98E-03
107GO:0015996: chlorophyll catabolic process6.98E-03
108GO:0006783: heme biosynthetic process7.91E-03
109GO:0009821: alkaloid biosynthetic process7.91E-03
110GO:0010206: photosystem II repair7.91E-03
111GO:0046916: cellular transition metal ion homeostasis7.91E-03
112GO:0071577: zinc II ion transmembrane transport8.89E-03
113GO:0005982: starch metabolic process8.89E-03
114GO:0009638: phototropism8.89E-03
115GO:0031425: chloroplast RNA processing8.89E-03
116GO:0045036: protein targeting to chloroplast9.92E-03
117GO:0009641: shade avoidance9.92E-03
118GO:0006896: Golgi to vacuole transport9.92E-03
119GO:0006782: protoporphyrinogen IX biosynthetic process9.92E-03
120GO:0015770: sucrose transport1.10E-02
121GO:0006415: translational termination1.10E-02
122GO:0006508: proteolysis1.10E-02
123GO:0009684: indoleacetic acid biosynthetic process1.10E-02
124GO:0006790: sulfur compound metabolic process1.21E-02
125GO:0005983: starch catabolic process1.21E-02
126GO:0016024: CDP-diacylglycerol biosynthetic process1.21E-02
127GO:0010588: cotyledon vascular tissue pattern formation1.32E-02
128GO:0010223: secondary shoot formation1.44E-02
129GO:0009266: response to temperature stimulus1.44E-02
130GO:0010143: cutin biosynthetic process1.44E-02
131GO:0010207: photosystem II assembly1.44E-02
132GO:0010020: chloroplast fission1.44E-02
133GO:0046854: phosphatidylinositol phosphorylation1.56E-02
134GO:0009901: anther dehiscence1.56E-02
135GO:0006636: unsaturated fatty acid biosynthetic process1.69E-02
136GO:0006364: rRNA processing1.77E-02
137GO:0005992: trehalose biosynthetic process1.82E-02
138GO:0051603: proteolysis involved in cellular protein catabolic process1.83E-02
139GO:0019915: lipid storage2.08E-02
140GO:0009269: response to desiccation2.08E-02
141GO:0048367: shoot system development2.16E-02
142GO:0080167: response to karrikin2.17E-02
143GO:0030433: ubiquitin-dependent ERAD pathway2.22E-02
144GO:0006730: one-carbon metabolic process2.22E-02
145GO:0019748: secondary metabolic process2.22E-02
146GO:0016226: iron-sulfur cluster assembly2.22E-02
147GO:0009416: response to light stimulus2.27E-02
148GO:0009686: gibberellin biosynthetic process2.37E-02
149GO:0016117: carotenoid biosynthetic process2.66E-02
150GO:0042147: retrograde transport, endosome to Golgi2.66E-02
151GO:0080022: primary root development2.81E-02
152GO:0010087: phloem or xylem histogenesis2.81E-02
153GO:0010197: polar nucleus fusion2.96E-02
154GO:0010182: sugar mediated signaling pathway2.96E-02
155GO:0010268: brassinosteroid homeostasis2.96E-02
156GO:0009958: positive gravitropism2.96E-02
157GO:0010154: fruit development2.96E-02
158GO:0009556: microsporogenesis3.28E-02
159GO:0009851: auxin biosynthetic process3.28E-02
160GO:0006623: protein targeting to vacuole3.28E-02
161GO:0009791: post-embryonic development3.28E-02
162GO:0048825: cotyledon development3.28E-02
163GO:0009058: biosynthetic process3.32E-02
164GO:0016042: lipid catabolic process3.41E-02
165GO:0006891: intra-Golgi vesicle-mediated transport3.44E-02
166GO:0016132: brassinosteroid biosynthetic process3.44E-02
167GO:0032502: developmental process3.61E-02
168GO:0009630: gravitropism3.61E-02
169GO:0009790: embryo development3.68E-02
170GO:0009793: embryo development ending in seed dormancy3.74E-02
171GO:0010090: trichome morphogenesis3.78E-02
172GO:0016125: sterol metabolic process3.95E-02
173GO:0006810: transport4.28E-02
174GO:0016126: sterol biosynthetic process4.47E-02
175GO:0009607: response to biotic stimulus4.65E-02
176GO:0006906: vesicle fusion4.84E-02
RankGO TermAdjusted P value
1GO:0004823: leucine-tRNA ligase activity0.00E+00
2GO:0046408: chlorophyll synthetase activity0.00E+00
3GO:0015139: alpha-ketoglutarate transmembrane transporter activity0.00E+00
4GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity0.00E+00
5GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity0.00E+00
6GO:0010303: limit dextrinase activity0.00E+00
7GO:0046422: violaxanthin de-epoxidase activity0.00E+00
8GO:0052667: phosphomethylethanolamine N-methyltransferase activity0.00E+00
9GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
10GO:0051060: pullulanase activity0.00E+00
11GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity0.00E+00
12GO:0004822: isoleucine-tRNA ligase activity0.00E+00
13GO:0002161: aminoacyl-tRNA editing activity1.87E-05
14GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor7.33E-05
15GO:0005528: FK506 binding1.45E-04
16GO:0019843: rRNA binding2.09E-04
17GO:0004812: aminoacyl-tRNA ligase activity3.09E-04
18GO:0042586: peptide deformylase activity3.42E-04
19GO:0034256: chlorophyll(ide) b reductase activity3.42E-04
20GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity3.42E-04
21GO:1905201: gibberellin transmembrane transporter activity3.42E-04
22GO:0008184: glycogen phosphorylase activity3.42E-04
23GO:0051777: ent-kaurenoate oxidase activity3.42E-04
24GO:0004856: xylulokinase activity3.42E-04
25GO:0004645: phosphorylase activity3.42E-04
26GO:0004853: uroporphyrinogen decarboxylase activity3.42E-04
27GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.98E-04
28GO:0015367: oxoglutarate:malate antiporter activity7.45E-04
29GO:0004310: farnesyl-diphosphate farnesyltransferase activity7.45E-04
30GO:0008967: phosphoglycolate phosphatase activity7.45E-04
31GO:0000234: phosphoethanolamine N-methyltransferase activity7.45E-04
32GO:0047746: chlorophyllase activity7.45E-04
33GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity7.45E-04
34GO:0004617: phosphoglycerate dehydrogenase activity7.45E-04
35GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity7.45E-04
36GO:0052832: inositol monophosphate 3-phosphatase activity7.45E-04
37GO:0033201: alpha-1,4-glucan synthase activity7.45E-04
38GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity7.45E-04
39GO:0008934: inositol monophosphate 1-phosphatase activity7.45E-04
40GO:0080097: L-tryptophan:pyruvate aminotransferase activity7.45E-04
41GO:0016630: protochlorophyllide reductase activity7.45E-04
42GO:0052833: inositol monophosphate 4-phosphatase activity7.45E-04
43GO:0047372: acylglycerol lipase activity8.59E-04
44GO:0004751: ribose-5-phosphate isomerase activity1.21E-03
45GO:0045174: glutathione dehydrogenase (ascorbate) activity1.21E-03
46GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.21E-03
47GO:0071917: triose-phosphate transmembrane transporter activity1.21E-03
48GO:0008864: formyltetrahydrofolate deformylase activity1.21E-03
49GO:0004373: glycogen (starch) synthase activity1.21E-03
50GO:0090729: toxin activity1.21E-03
51GO:0050833: pyruvate transmembrane transporter activity1.21E-03
52GO:0003774: motor activity1.25E-03
53GO:0031409: pigment binding1.55E-03
54GO:0016851: magnesium chelatase activity1.74E-03
55GO:0008508: bile acid:sodium symporter activity1.74E-03
56GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity1.74E-03
57GO:0015131: oxaloacetate transmembrane transporter activity1.74E-03
58GO:0016149: translation release factor activity, codon specific1.74E-03
59GO:0022890: inorganic cation transmembrane transporter activity1.74E-03
60GO:0004185: serine-type carboxypeptidase activity2.06E-03
61GO:0015120: phosphoglycerate transmembrane transporter activity2.33E-03
62GO:0004659: prenyltransferase activity2.33E-03
63GO:0016279: protein-lysine N-methyltransferase activity2.33E-03
64GO:0045430: chalcone isomerase activity2.33E-03
65GO:0009011: starch synthase activity2.33E-03
66GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity2.98E-03
67GO:0016846: carbon-sulfur lyase activity2.98E-03
68GO:0003959: NADPH dehydrogenase activity2.98E-03
69GO:0016773: phosphotransferase activity, alcohol group as acceptor2.98E-03
70GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity3.68E-03
71GO:0004629: phospholipase C activity3.68E-03
72GO:0004556: alpha-amylase activity3.68E-03
73GO:0004366: glycerol-3-phosphate O-acyltransferase activity3.68E-03
74GO:0048038: quinone binding4.22E-03
75GO:0004435: phosphatidylinositol phospholipase C activity4.43E-03
76GO:0004723: calcium-dependent protein serine/threonine phosphatase activity4.43E-03
77GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity4.43E-03
78GO:0016491: oxidoreductase activity4.48E-03
79GO:0016791: phosphatase activity5.11E-03
80GO:0015140: malate transmembrane transporter activity5.23E-03
81GO:0008237: metallopeptidase activity5.43E-03
82GO:0016168: chlorophyll binding6.45E-03
83GO:0008271: secondary active sulfate transmembrane transporter activity6.98E-03
84GO:0046914: transition metal ion binding6.98E-03
85GO:0102483: scopolin beta-glucosidase activity7.19E-03
86GO:0003747: translation release factor activity7.91E-03
87GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity7.97E-03
88GO:0004222: metalloendopeptidase activity8.79E-03
89GO:0016844: strictosidine synthase activity8.89E-03
90GO:0008559: xenobiotic-transporting ATPase activity1.10E-02
91GO:0015386: potassium:proton antiporter activity1.10E-02
92GO:0008515: sucrose transmembrane transporter activity1.10E-02
93GO:0000149: SNARE binding1.11E-02
94GO:0008422: beta-glucosidase activity1.11E-02
95GO:0015116: sulfate transmembrane transporter activity1.21E-02
96GO:0000049: tRNA binding1.21E-02
97GO:0005484: SNAP receptor activity1.31E-02
98GO:0004089: carbonate dehydratase activity1.32E-02
99GO:0031072: heat shock protein binding1.32E-02
100GO:0003725: double-stranded RNA binding1.32E-02
101GO:0004565: beta-galactosidase activity1.32E-02
102GO:0004022: alcohol dehydrogenase (NAD) activity1.32E-02
103GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.44E-02
104GO:0008266: poly(U) RNA binding1.44E-02
105GO:0051119: sugar transmembrane transporter activity1.56E-02
106GO:0016788: hydrolase activity, acting on ester bonds1.70E-02
107GO:0051536: iron-sulfur cluster binding1.82E-02
108GO:0005385: zinc ion transmembrane transporter activity1.82E-02
109GO:0015079: potassium ion transmembrane transporter activity1.95E-02
110GO:0008324: cation transmembrane transporter activity1.95E-02
111GO:0003723: RNA binding2.01E-02
112GO:0004176: ATP-dependent peptidase activity2.08E-02
113GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups2.16E-02
114GO:0003727: single-stranded RNA binding2.51E-02
115GO:0003735: structural constituent of ribosome2.84E-02
116GO:0004871: signal transducer activity2.89E-02
117GO:0015299: solute:proton antiporter activity3.12E-02
118GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.41E-02
119GO:0008565: protein transporter activity3.77E-02
120GO:0015297: antiporter activity4.14E-02
121GO:0016597: amino acid binding4.30E-02
122GO:0005525: GTP binding4.67E-02
123GO:0020037: heme binding4.80E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast7.07E-39
2GO:0009535: chloroplast thylakoid membrane5.78E-22
3GO:0009570: chloroplast stroma1.38E-20
4GO:0009534: chloroplast thylakoid1.12E-16
5GO:0009941: chloroplast envelope3.48E-11
6GO:0009543: chloroplast thylakoid lumen2.78E-10
7GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)3.48E-09
8GO:0009579: thylakoid8.94E-09
9GO:0031969: chloroplast membrane3.46E-08
10GO:0031977: thylakoid lumen1.50E-06
11GO:0009547: plastid ribosome3.42E-04
12GO:0016459: myosin complex7.45E-04
13GO:0010007: magnesium chelatase complex1.21E-03
14GO:0033281: TAT protein transport complex1.21E-03
15GO:0030095: chloroplast photosystem II1.25E-03
16GO:0030076: light-harvesting complex1.39E-03
17GO:0042646: plastid nucleoid1.74E-03
18GO:0009517: PSII associated light-harvesting complex II2.33E-03
19GO:0005840: ribosome2.72E-03
20GO:0009840: chloroplastic endopeptidase Clp complex4.43E-03
21GO:0009706: chloroplast inner membrane4.73E-03
22GO:0012507: ER to Golgi transport vesicle membrane6.08E-03
23GO:0009501: amyloplast6.08E-03
24GO:0005763: mitochondrial small ribosomal subunit7.91E-03
25GO:0042644: chloroplast nucleoid7.91E-03
26GO:0031901: early endosome membrane7.91E-03
27GO:0009536: plastid1.13E-02
28GO:0031201: SNARE complex1.20E-02
29GO:0000311: plastid large ribosomal subunit1.21E-02
30GO:0032040: small-subunit processome1.21E-02
31GO:0016021: integral component of membrane1.67E-02
32GO:0005789: endoplasmic reticulum membrane1.73E-02
33GO:0009654: photosystem II oxygen evolving complex1.95E-02
34GO:0042651: thylakoid membrane1.95E-02
35GO:0015935: small ribosomal subunit2.08E-02
36GO:0009532: plastid stroma2.08E-02
37GO:0016020: membrane2.62E-02
38GO:0010287: plastoglobule2.99E-02
39GO:0009522: photosystem I3.12E-02
40GO:0009523: photosystem II3.28E-02
41GO:0019898: extrinsic component of membrane3.28E-02
42GO:0030529: intracellular ribonucleoprotein complex4.47E-02
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Gene type



Gene DE type