co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G78590

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0061157: mRNA destabilization	0.00E+00
2	GO:0046520: sphingoid biosynthetic process	5.48E-05
3	GO:0031648: protein destabilization	1.34E-04
4	GO:0016255: attachment of GPI anchor to protein	2.28E-04
5	GO:1902347: response to strigolactone	4.45E-04
6	GO:0009959: negative gravitropism	6.92E-04
7	GO:0010161: red light signaling pathway	9.62E-04
8	GO:0009704: de-etiolation	1.11E-03
9	GO:0042255: ribosome assembly	1.11E-03
10	GO:0006353: DNA-templated transcription, termination	1.11E-03
11	GO:0010100: negative regulation of photomorphogenesis	1.26E-03
12	GO:0010099: regulation of photomorphogenesis	1.26E-03
13	GO:0032259: methylation	1.34E-03
14	GO:0051865: protein autoubiquitination	1.41E-03
15	GO:0006783: heme biosynthetic process	1.41E-03
16	GO:0000902: cell morphogenesis	1.41E-03
17	GO:0005982: starch metabolic process	1.58E-03
18	GO:1900865: chloroplast RNA modification	1.58E-03
19	GO:0048367: shoot system development	1.72E-03
20	GO:0016567: protein ubiquitination	1.80E-03
21	GO:0012501: programmed cell death	2.11E-03
22	GO:0005983: starch catabolic process	2.11E-03
23	GO:0009767: photosynthetic electron transport chain	2.30E-03
24	GO:0010588: cotyledon vascular tissue pattern formation	2.30E-03
25	GO:0010102: lateral root morphogenesis	2.30E-03
26	GO:0090351: seedling development	2.70E-03
27	GO:0010187: negative regulation of seed germination	3.11E-03
28	GO:0016114: terpenoid biosynthetic process	3.54E-03
29	GO:0006306: DNA methylation	3.54E-03
30	GO:0048278: vesicle docking	3.54E-03
31	GO:2000022: regulation of jasmonic acid mediated signaling pathway	3.77E-03
32	GO:0071215: cellular response to abscisic acid stimulus	4.00E-03
33	GO:0009686: gibberellin biosynthetic process	4.00E-03
34	GO:0008380: RNA splicing	4.08E-03
35	GO:0045492: xylan biosynthetic process	4.23E-03
36	GO:0080022: primary root development	4.71E-03
37	GO:0010087: phloem or xylem histogenesis	4.71E-03
38	GO:0009960: endosperm development	4.96E-03
39	GO:0010305: leaf vascular tissue pattern formation	4.96E-03
40	GO:0061025: membrane fusion	5.22E-03
41	GO:0071554: cell wall organization or biogenesis	5.74E-03
42	GO:0009723: response to ethylene	6.10E-03
43	GO:1901657: glycosyl compound metabolic process	6.27E-03
44	GO:0030163: protein catabolic process	6.27E-03
45	GO:0010027: thylakoid membrane organization	7.40E-03
46	GO:0010029: regulation of seed germination	7.69E-03
47	GO:0045892: negative regulation of transcription, DNA-templated	7.95E-03
48	GO:0006906: vesicle fusion	7.99E-03
49	GO:0009733: response to auxin	8.25E-03
50	GO:0015995: chlorophyll biosynthetic process	8.29E-03
51	GO:0000160: phosphorelay signal transduction system	9.22E-03
52	GO:0016042: lipid catabolic process	9.38E-03
53	GO:0048527: lateral root development	9.86E-03
54	GO:0006887: exocytosis	1.19E-02
55	GO:0006631: fatty acid metabolic process	1.19E-02
56	GO:0009640: photomorphogenesis	1.26E-02
57	GO:0009734: auxin-activated signaling pathway	1.36E-02
58	GO:0009736: cytokinin-activated signaling pathway	1.55E-02
59	GO:0006857: oligopeptide transport	1.63E-02
60	GO:0009620: response to fungus	1.87E-02
61	GO:0009740: gibberellic acid mediated signaling pathway	1.91E-02
62	GO:0016569: covalent chromatin modification	1.91E-02
63	GO:0006413: translational initiation	2.80E-02
64	GO:0009739: response to gibberellin	3.19E-02
65	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.19E-02
66	GO:0006470: protein dephosphorylation	3.24E-02
67	GO:0009651: response to salt stress	3.28E-02
68	GO:0009658: chloroplast organization	4.01E-02
69	GO:0009409: response to cold	4.69E-02
70	GO:0046777: protein autophosphorylation	4.90E-02
71	GO:0044550: secondary metabolite biosynthetic process	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0051752: phosphoglucan, water dikinase activity	0.00E+00
2	GO:0000170: sphingosine hydroxylase activity	5.48E-05
3	GO:0010313: phytochrome binding	5.48E-05
4	GO:0019200: carbohydrate kinase activity	1.34E-04
5	GO:0042284: sphingolipid delta-4 desaturase activity	1.34E-04
6	GO:0003727: single-stranded RNA binding	2.29E-04
7	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	5.66E-04
8	GO:0008168: methyltransferase activity	6.41E-04
9	GO:2001070: starch binding	6.92E-04
10	GO:0080030: methyl indole-3-acetate esterase activity	6.92E-04
11	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	8.25E-04
12	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	8.25E-04
13	GO:0016298: lipase activity	1.47E-03
14	GO:0004842: ubiquitin-protein transferase activity	2.25E-03
15	GO:0004190: aspartic-type endopeptidase activity	2.70E-03
16	GO:0010333: terpene synthase activity	3.54E-03
17	GO:0016788: hydrolase activity, acting on ester bonds	5.38E-03
18	GO:0000156: phosphorelay response regulator activity	6.27E-03
19	GO:0005200: structural constituent of cytoskeleton	6.83E-03
20	GO:0016413: O-acetyltransferase activity	7.11E-03
21	GO:0052689: carboxylic ester hydrolase activity	7.22E-03
22	GO:0102483: scopolin beta-glucosidase activity	8.29E-03
23	GO:0004519: endonuclease activity	1.05E-02
24	GO:0008422: beta-glucosidase activity	1.12E-02
25	GO:0000149: SNARE binding	1.12E-02
26	GO:0005484: SNAP receptor activity	1.26E-02
27	GO:0043621: protein self-association	1.33E-02
28	GO:0003690: double-stranded DNA binding	1.59E-02
29	GO:0016874: ligase activity	1.91E-02
30	GO:0019843: rRNA binding	2.34E-02
31	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.38E-02
32	GO:0003743: translation initiation factor activity	3.29E-02
33	GO:0005506: iron ion binding	3.43E-02
34	GO:0042802: identical protein binding	3.49E-02
35	GO:0003824: catalytic activity	3.82E-02
36	GO:0000287: magnesium ion binding	3.96E-02
37	GO:0003682: chromatin binding	4.18E-02
38	GO:0008233: peptidase activity	4.62E-02
39	GO:0004497: monooxygenase activity	4.68E-02
40	GO:0061630: ubiquitin protein ligase activity	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0042765: GPI-anchor transamidase complex	2.28E-04
2	GO:0009544: chloroplast ATP synthase complex	4.45E-04
3	GO:0009654: photosystem II oxygen evolving complex	3.32E-03
4	GO:0009532: plastid stroma	3.54E-03
5	GO:0019898: extrinsic component of membrane	5.48E-03
6	GO:0031201: SNARE complex	1.19E-02
7	GO:0012505: endomembrane system	1.95E-02