co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G78450

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080127: fruit septum development	0.00E+00
2	GO:0006907: pinocytosis	0.00E+00
3	GO:0045014: negative regulation of transcription by glucose	0.00E+00
4	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
5	GO:0009686: gibberellin biosynthetic process	1.23E-04
6	GO:0010070: zygote asymmetric cell division	2.43E-04
7	GO:0034757: negative regulation of iron ion transport	2.43E-04
8	GO:0010726: positive regulation of hydrogen peroxide metabolic process	2.43E-04
9	GO:0010271: regulation of chlorophyll catabolic process	5.39E-04
10	GO:0009786: regulation of asymmetric cell division	5.39E-04
11	GO:0010069: zygote asymmetric cytokinesis in embryo sac	5.39E-04
12	GO:0009887: animal organ morphogenesis	7.77E-04
13	GO:0080117: secondary growth	8.75E-04
14	GO:0048575: short-day photoperiodism, flowering	8.75E-04
15	GO:0045910: negative regulation of DNA recombination	8.75E-04
16	GO:0010321: regulation of vegetative phase change	1.25E-03
17	GO:0034059: response to anoxia	1.25E-03
18	GO:0007276: gamete generation	1.25E-03
19	GO:0007165: signal transduction	1.33E-03
20	GO:0071215: cellular response to abscisic acid stimulus	1.53E-03
21	GO:0042127: regulation of cell proliferation	1.66E-03
22	GO:0009956: radial pattern formation	1.67E-03
23	GO:0009755: hormone-mediated signaling pathway	1.67E-03
24	GO:0009734: auxin-activated signaling pathway	1.85E-03
25	GO:0009741: response to brassinosteroid	2.09E-03
26	GO:0010438: cellular response to sulfur starvation	2.13E-03
27	GO:0009696: salicylic acid metabolic process	2.13E-03
28	GO:0045487: gibberellin catabolic process	2.13E-03
29	GO:0071554: cell wall organization or biogenesis	2.57E-03
30	GO:1902456: regulation of stomatal opening	2.62E-03
31	GO:0048831: regulation of shoot system development	2.62E-03
32	GO:0003006: developmental process involved in reproduction	2.62E-03
33	GO:0010942: positive regulation of cell death	2.62E-03
34	GO:0010358: leaf shaping	2.62E-03
35	GO:0016554: cytidine to uridine editing	2.62E-03
36	GO:0010583: response to cyclopentenone	2.75E-03
37	GO:0032502: developmental process	2.75E-03
38	GO:0048509: regulation of meristem development	3.15E-03
39	GO:0031930: mitochondria-nucleus signaling pathway	3.15E-03
40	GO:0009733: response to auxin	3.56E-03
41	GO:0010444: guard mother cell differentiation	3.72E-03
42	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.72E-03
43	GO:0000082: G1/S transition of mitotic cell cycle	3.72E-03
44	GO:0010439: regulation of glucosinolate biosynthetic process	4.31E-03
45	GO:0009690: cytokinin metabolic process	4.31E-03
46	GO:0009704: de-etiolation	4.31E-03
47	GO:2000070: regulation of response to water deprivation	4.31E-03
48	GO:0010492: maintenance of shoot apical meristem identity	4.31E-03
49	GO:0009819: drought recovery	4.31E-03
50	GO:0040008: regulation of growth	4.74E-03
51	GO:0032544: plastid translation	4.93E-03
52	GO:0007186: G-protein coupled receptor signaling pathway	4.93E-03
53	GO:0006468: protein phosphorylation	5.12E-03
54	GO:0000373: Group II intron splicing	5.59E-03
55	GO:0048589: developmental growth	5.59E-03
56	GO:0009056: catabolic process	5.59E-03
57	GO:0048507: meristem development	5.59E-03
58	GO:0009867: jasmonic acid mediated signaling pathway	6.13E-03
59	GO:1900865: chloroplast RNA modification	6.27E-03
60	GO:0009870: defense response signaling pathway, resistance gene-dependent	6.99E-03
61	GO:0048829: root cap development	6.99E-03
62	GO:0009641: shade avoidance	6.99E-03
63	GO:0006298: mismatch repair	6.99E-03
64	GO:0009682: induced systemic resistance	7.73E-03
65	GO:0042546: cell wall biogenesis	8.22E-03
66	GO:0010152: pollen maturation	8.49E-03
67	GO:0010105: negative regulation of ethylene-activated signaling pathway	8.49E-03
68	GO:0010582: floral meristem determinacy	8.49E-03
69	GO:0010588: cotyledon vascular tissue pattern formation	9.29E-03
70	GO:0010102: lateral root morphogenesis	9.29E-03
71	GO:0010207: photosystem II assembly	1.01E-02
72	GO:0010540: basipetal auxin transport	1.01E-02
73	GO:0006302: double-strand break repair	1.01E-02
74	GO:0048467: gynoecium development	1.01E-02
75	GO:0009933: meristem structural organization	1.01E-02
76	GO:0009416: response to light stimulus	1.07E-02
77	GO:0009825: multidimensional cell growth	1.10E-02
78	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.20E-02
79	GO:0006874: cellular calcium ion homeostasis	1.37E-02
80	GO:0009740: gibberellic acid mediated signaling pathway	1.43E-02
81	GO:0051321: meiotic cell cycle	1.46E-02
82	GO:0016114: terpenoid biosynthetic process	1.46E-02
83	GO:0051726: regulation of cell cycle	1.62E-02
84	GO:0016310: phosphorylation	1.63E-02
85	GO:0010082: regulation of root meristem growth	1.66E-02
86	GO:0009625: response to insect	1.66E-02
87	GO:0048443: stamen development	1.76E-02
88	GO:0070417: cellular response to cold	1.86E-02
89	GO:0000271: polysaccharide biosynthetic process	1.97E-02
90	GO:0010087: phloem or xylem histogenesis	1.97E-02
91	GO:0010118: stomatal movement	1.97E-02
92	GO:0009958: positive gravitropism	2.07E-02
93	GO:0010182: sugar mediated signaling pathway	2.07E-02
94	GO:0010268: brassinosteroid homeostasis	2.07E-02
95	GO:0045489: pectin biosynthetic process	2.07E-02
96	GO:0010305: leaf vascular tissue pattern formation	2.07E-02
97	GO:0007018: microtubule-based movement	2.18E-02
98	GO:0016132: brassinosteroid biosynthetic process	2.41E-02
99	GO:0002229: defense response to oomycetes	2.41E-02
100	GO:0016567: protein ubiquitination	2.45E-02
101	GO:0010090: trichome morphogenesis	2.64E-02
102	GO:0009567: double fertilization forming a zygote and endosperm	2.76E-02
103	GO:0016125: sterol metabolic process	2.76E-02
104	GO:0019760: glucosinolate metabolic process	2.76E-02
105	GO:0009739: response to gibberellin	2.95E-02
106	GO:0006470: protein dephosphorylation	3.01E-02
107	GO:0007166: cell surface receptor signaling pathway	3.01E-02
108	GO:0051607: defense response to virus	3.01E-02
109	GO:0000910: cytokinesis	3.01E-02
110	GO:0016126: sterol biosynthetic process	3.13E-02
111	GO:0010029: regulation of seed germination	3.26E-02
112	GO:0009627: systemic acquired resistance	3.39E-02
113	GO:0009908: flower development	3.41E-02
114	GO:0010411: xyloglucan metabolic process	3.52E-02
115	GO:0048573: photoperiodism, flowering	3.52E-02
116	GO:0009817: defense response to fungus, incompatible interaction	3.78E-02
117	GO:0000160: phosphorelay signal transduction system	3.92E-02
118	GO:0009826: unidimensional cell growth	3.92E-02
119	GO:0010311: lateral root formation	3.92E-02
120	GO:0006811: ion transport	4.05E-02
121	GO:0048527: lateral root development	4.19E-02
122	GO:0006865: amino acid transport	4.33E-02
123	GO:0016051: carbohydrate biosynthetic process	4.48E-02
124	GO:0048366: leaf development	4.78E-02
125	GO:0006839: mitochondrial transport	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0071633: dihydroceramidase activity	0.00E+00
2	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
3	GO:0009899: ent-kaurene synthase activity	0.00E+00
4	GO:0010012: steroid 22-alpha hydroxylase activity	2.43E-04
5	GO:0045543: gibberellin 2-beta-dioxygenase activity	5.39E-04
6	GO:0010296: prenylcysteine methylesterase activity	5.39E-04
7	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	5.39E-04
8	GO:0008805: carbon-monoxide oxygenase activity	5.39E-04
9	GO:0009884: cytokinin receptor activity	5.39E-04
10	GO:0016301: kinase activity	8.05E-04
11	GO:0005034: osmosensor activity	8.75E-04
12	GO:0080031: methyl salicylate esterase activity	1.25E-03
13	GO:0045544: gibberellin 20-oxidase activity	1.25E-03
14	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.25E-03
15	GO:0010011: auxin binding	1.67E-03
16	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	1.67E-03
17	GO:0019199: transmembrane receptor protein kinase activity	1.67E-03
18	GO:0004930: G-protein coupled receptor activity	1.67E-03
19	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	2.09E-03
20	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.13E-03
21	GO:0030983: mismatched DNA binding	2.62E-03
22	GO:0080030: methyl indole-3-acetate esterase activity	2.62E-03
23	GO:0004709: MAP kinase kinase kinase activity	2.62E-03
24	GO:0019900: kinase binding	3.15E-03
25	GO:0016832: aldehyde-lyase activity	3.15E-03
26	GO:0016413: O-acetyltransferase activity	3.50E-03
27	GO:0004722: protein serine/threonine phosphatase activity	3.74E-03
28	GO:0005096: GTPase activator activity	5.08E-03
29	GO:0004673: protein histidine kinase activity	6.99E-03
30	GO:0016788: hydrolase activity, acting on ester bonds	8.98E-03
31	GO:0000155: phosphorelay sensor kinase activity	9.29E-03
32	GO:0004674: protein serine/threonine kinase activity	1.02E-02
33	GO:0003712: transcription cofactor activity	1.10E-02
34	GO:0004970: ionotropic glutamate receptor activity	1.10E-02
35	GO:0005217: intracellular ligand-gated ion channel activity	1.10E-02
36	GO:0043424: protein histidine kinase binding	1.37E-02
37	GO:0008408: 3'-5' exonuclease activity	1.46E-02
38	GO:0010333: terpene synthase activity	1.46E-02
39	GO:0042803: protein homodimerization activity	1.54E-02
40	GO:0004871: signal transducer activity	1.54E-02
41	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.56E-02
42	GO:0030570: pectate lyase activity	1.66E-02
43	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.96E-02
44	GO:0009055: electron carrier activity	2.07E-02
45	GO:0004519: endonuclease activity	2.10E-02
46	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.17E-02
47	GO:0016853: isomerase activity	2.18E-02
48	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.41E-02
49	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.46E-02
50	GO:0004518: nuclease activity	2.52E-02
51	GO:0003684: damaged DNA binding	2.76E-02
52	GO:0004721: phosphoprotein phosphatase activity	3.52E-02
53	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.52E-02
54	GO:0008236: serine-type peptidase activity	3.65E-02
55	GO:0000287: magnesium ion binding	4.00E-02
56	GO:0030145: manganese ion binding	4.19E-02
57	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.19E-02
58	GO:0003697: single-stranded DNA binding	4.48E-02
59	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0000791: euchromatin	2.43E-04
3	GO:0030870: Mre11 complex	5.39E-04
4	GO:0030139: endocytic vesicle	8.75E-04
5	GO:0009531: secondary cell wall	1.25E-03
6	GO:0032585: multivesicular body membrane	1.25E-03
7	GO:0000795: synaptonemal complex	2.13E-03
8	GO:0005886: plasma membrane	3.22E-03
9	GO:0009986: cell surface	3.72E-03
10	GO:0090406: pollen tube	7.90E-03
11	GO:0005875: microtubule associated complex	1.18E-02
12	GO:0009532: plastid stroma	1.46E-02
13	GO:0005871: kinesin complex	1.86E-02
14	GO:0009504: cell plate	2.29E-02
15	GO:0000785: chromatin	2.52E-02