co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G78380

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1900409: positive regulation of cellular response to oxidative stress	0.00E+00
2	GO:0072722: response to amitrole	0.00E+00
3	GO:0006216: cytidine catabolic process	0.00E+00
4	GO:0090400: stress-induced premature senescence	0.00E+00
5	GO:2000117: negative regulation of cysteine-type endopeptidase activity	0.00E+00
6	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
7	GO:1904250: positive regulation of age-related resistance	0.00E+00
8	GO:0010398: xylogalacturonan metabolic process	0.00E+00
9	GO:0016102: diterpenoid biosynthetic process	0.00E+00
10	GO:0046686: response to cadmium ion	2.34E-05
11	GO:0006564: L-serine biosynthetic process	3.21E-05
12	GO:0042964: thioredoxin reduction	1.58E-04
13	GO:0006680: glucosylceramide catabolic process	1.58E-04
14	GO:0055114: oxidation-reduction process	2.85E-04
15	GO:0009407: toxin catabolic process	3.10E-04
16	GO:0015709: thiosulfate transport	3.60E-04
17	GO:0071422: succinate transmembrane transport	3.60E-04
18	GO:0046939: nucleotide phosphorylation	3.60E-04
19	GO:0080026: response to indolebutyric acid	3.60E-04
20	GO:1902000: homogentisate catabolic process	3.60E-04
21	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	3.60E-04
22	GO:0006099: tricarboxylic acid cycle	3.95E-04
23	GO:0000162: tryptophan biosynthetic process	5.37E-04
24	GO:0010272: response to silver ion	5.89E-04
25	GO:0009072: aromatic amino acid family metabolic process	5.89E-04
26	GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity	5.89E-04
27	GO:0006591: ornithine metabolic process	5.89E-04
28	GO:0006556: S-adenosylmethionine biosynthetic process	5.89E-04
29	GO:0009062: fatty acid catabolic process	5.89E-04
30	GO:0061158: 3'-UTR-mediated mRNA destabilization	5.89E-04
31	GO:0009636: response to toxic substance	5.99E-04
32	GO:0016998: cell wall macromolecule catabolic process	7.18E-04
33	GO:0015729: oxaloacetate transport	8.43E-04
34	GO:0080024: indolebutyric acid metabolic process	8.43E-04
35	GO:0009651: response to salt stress	9.40E-04
36	GO:1902584: positive regulation of response to water deprivation	1.12E-03
37	GO:0010188: response to microbial phytotoxin	1.12E-03
38	GO:0006878: cellular copper ion homeostasis	1.12E-03
39	GO:0045454: cell redox homeostasis	1.28E-03
40	GO:0009851: auxin biosynthetic process	1.32E-03
41	GO:0045927: positive regulation of growth	1.41E-03
42	GO:0071423: malate transmembrane transport	1.41E-03
43	GO:0000304: response to singlet oxygen	1.41E-03
44	GO:0098719: sodium ion import across plasma membrane	1.41E-03
45	GO:0046283: anthocyanin-containing compound metabolic process	1.41E-03
46	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.74E-03
47	GO:0006555: methionine metabolic process	1.74E-03
48	GO:0009228: thiamine biosynthetic process	1.74E-03
49	GO:0035435: phosphate ion transmembrane transport	1.74E-03
50	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	1.74E-03
51	GO:0009972: cytidine deamination	1.74E-03
52	GO:0019509: L-methionine salvage from methylthioadenosine	2.09E-03
53	GO:0034389: lipid particle organization	2.09E-03
54	GO:0009082: branched-chain amino acid biosynthetic process	2.09E-03
55	GO:0009099: valine biosynthetic process	2.09E-03
56	GO:0080113: regulation of seed growth	2.09E-03
57	GO:0010150: leaf senescence	2.31E-03
58	GO:0080027: response to herbivore	2.45E-03
59	GO:0080186: developmental vegetative growth	2.45E-03
60	GO:0071669: plant-type cell wall organization or biogenesis	2.45E-03
61	GO:0008272: sulfate transport	2.45E-03
62	GO:0050829: defense response to Gram-negative bacterium	2.45E-03
63	GO:1900057: positive regulation of leaf senescence	2.45E-03
64	GO:1902074: response to salt	2.45E-03
65	GO:0006102: isocitrate metabolic process	2.84E-03
66	GO:0009819: drought recovery	2.84E-03
67	GO:0043068: positive regulation of programmed cell death	2.84E-03
68	GO:0010043: response to zinc ion	3.04E-03
69	GO:0006002: fructose 6-phosphate metabolic process	3.25E-03
70	GO:0010497: plasmodesmata-mediated intercellular transport	3.25E-03
71	GO:0019430: removal of superoxide radicals	3.25E-03
72	GO:0009097: isoleucine biosynthetic process	3.25E-03
73	GO:0051453: regulation of intracellular pH	4.12E-03
74	GO:0009098: leucine biosynthetic process	4.12E-03
75	GO:2000280: regulation of root development	4.12E-03
76	GO:0000209: protein polyubiquitination	4.46E-03
77	GO:0006032: chitin catabolic process	4.58E-03
78	GO:0009688: abscisic acid biosynthetic process	4.58E-03
79	GO:0043069: negative regulation of programmed cell death	4.58E-03
80	GO:0052544: defense response by callose deposition in cell wall	5.05E-03
81	GO:0000272: polysaccharide catabolic process	5.05E-03
82	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	5.19E-03
83	GO:0071365: cellular response to auxin stimulus	5.55E-03
84	GO:0006790: sulfur compound metabolic process	5.55E-03
85	GO:0055046: microgametogenesis	6.06E-03
86	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	6.06E-03
87	GO:0006807: nitrogen compound metabolic process	6.06E-03
88	GO:0006886: intracellular protein transport	6.90E-03
89	GO:0046854: phosphatidylinositol phosphorylation	7.13E-03
90	GO:0010053: root epidermal cell differentiation	7.13E-03
91	GO:0034976: response to endoplasmic reticulum stress	7.69E-03
92	GO:0006874: cellular calcium ion homeostasis	8.86E-03
93	GO:0019915: lipid storage	9.46E-03
94	GO:0030245: cellulose catabolic process	1.01E-02
95	GO:0006730: one-carbon metabolic process	1.01E-02
96	GO:0030433: ubiquitin-dependent ERAD pathway	1.01E-02
97	GO:0009693: ethylene biosynthetic process	1.07E-02
98	GO:0009561: megagametogenesis	1.14E-02
99	GO:0006979: response to oxidative stress	1.24E-02
100	GO:0045489: pectin biosynthetic process	1.34E-02
101	GO:0006662: glycerol ether metabolic process	1.34E-02
102	GO:0006814: sodium ion transport	1.41E-02
103	GO:0006623: protein targeting to vacuole	1.48E-02
104	GO:0010183: pollen tube guidance	1.48E-02
105	GO:0006635: fatty acid beta-oxidation	1.56E-02
106	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.59E-02
107	GO:0009630: gravitropism	1.63E-02
108	GO:0009617: response to bacterium	1.70E-02
109	GO:1901657: glycosyl compound metabolic process	1.71E-02
110	GO:0071281: cellular response to iron ion	1.71E-02
111	GO:0009567: double fertilization forming a zygote and endosperm	1.78E-02
112	GO:0019760: glucosinolate metabolic process	1.78E-02
113	GO:0006464: cellular protein modification process	1.78E-02
114	GO:0071805: potassium ion transmembrane transport	1.86E-02
115	GO:0009409: response to cold	1.93E-02
116	GO:0051607: defense response to virus	1.94E-02
117	GO:0009615: response to virus	2.02E-02
118	GO:0010029: regulation of seed germination	2.10E-02
119	GO:0050832: defense response to fungus	2.14E-02
120	GO:0009627: systemic acquired resistance	2.19E-02
121	GO:0006974: cellular response to DNA damage stimulus	2.19E-02
122	GO:0016049: cell growth	2.36E-02
123	GO:0048767: root hair elongation	2.53E-02
124	GO:0006499: N-terminal protein myristoylation	2.62E-02
125	GO:0048527: lateral root development	2.71E-02
126	GO:0016192: vesicle-mediated transport	2.88E-02
127	GO:0045087: innate immune response	2.89E-02
128	GO:0034599: cellular response to oxidative stress	2.98E-02
129	GO:0006839: mitochondrial transport	3.17E-02
130	GO:0042542: response to hydrogen peroxide	3.36E-02
131	GO:0031347: regulation of defense response	3.96E-02
132	GO:0009751: response to salicylic acid	3.98E-02
133	GO:0006629: lipid metabolic process	4.03E-02
134	GO:0009664: plant-type cell wall organization	4.07E-02
135	GO:0009846: pollen germination	4.07E-02
136	GO:0009809: lignin biosynthetic process	4.28E-02
137	GO:0009753: response to jasmonic acid	4.32E-02
138	GO:0042742: defense response to bacterium	4.32E-02
139	GO:0051603: proteolysis involved in cellular protein catabolic process	4.38E-02
140	GO:0008152: metabolic process	4.44E-02
141	GO:0006096: glycolytic process	4.82E-02
142	GO:0048316: seed development	4.93E-02
143	GO:0009733: response to auxin	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0016504: peptidase activator activity	0.00E+00
2	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
3	GO:0016229: steroid dehydrogenase activity	0.00E+00
4	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
5	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
6	GO:0070577: lysine-acetylated histone binding	0.00E+00
7	GO:0070401: NADP+ binding	0.00E+00
8	GO:0080013: (E,E)-geranyllinalool synthase activity	0.00E+00
9	GO:0047844: deoxycytidine deaminase activity	0.00E+00
10	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
11	GO:0008320: protein transmembrane transporter activity	8.96E-05
12	GO:0004033: aldo-keto reductase (NADP) activity	1.15E-04
13	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	1.58E-04
14	GO:0010179: IAA-Ala conjugate hydrolase activity	1.58E-04
15	GO:2001227: quercitrin binding	1.58E-04
16	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.58E-04
17	GO:0000824: inositol tetrakisphosphate 3-kinase activity	1.58E-04
18	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.58E-04
19	GO:0047326: inositol tetrakisphosphate 5-kinase activity	1.58E-04
20	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	1.58E-04
21	GO:0048037: cofactor binding	1.58E-04
22	GO:0004348: glucosylceramidase activity	1.58E-04
23	GO:2001147: camalexin binding	1.58E-04
24	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.58E-04
25	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	1.58E-04
26	GO:0004649: poly(ADP-ribose) glycohydrolase activity	1.58E-04
27	GO:0010297: heteropolysaccharide binding	3.60E-04
28	GO:0004617: phosphoglycerate dehydrogenase activity	3.60E-04
29	GO:0004775: succinate-CoA ligase (ADP-forming) activity	3.60E-04
30	GO:1990585: hydroxyproline O-arabinosyltransferase activity	3.60E-04
31	GO:0015117: thiosulfate transmembrane transporter activity	3.60E-04
32	GO:0019172: glyoxalase III activity	3.60E-04
33	GO:1901677: phosphate transmembrane transporter activity	3.60E-04
34	GO:0004776: succinate-CoA ligase (GDP-forming) activity	3.60E-04
35	GO:0004364: glutathione transferase activity	4.91E-04
36	GO:0004478: methionine adenosyltransferase activity	5.89E-04
37	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	5.89E-04
38	GO:0005310: dicarboxylic acid transmembrane transporter activity	5.89E-04
39	GO:0015141: succinate transmembrane transporter activity	5.89E-04
40	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	5.89E-04
41	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	5.89E-04
42	GO:0004165: dodecenoyl-CoA delta-isomerase activity	8.43E-04
43	GO:0052654: L-leucine transaminase activity	8.43E-04
44	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	8.43E-04
45	GO:0017077: oxidative phosphorylation uncoupler activity	8.43E-04
46	GO:0052655: L-valine transaminase activity	8.43E-04
47	GO:0019201: nucleotide kinase activity	8.43E-04
48	GO:0004416: hydroxyacylglutathione hydrolase activity	8.43E-04
49	GO:0015131: oxaloacetate transmembrane transporter activity	8.43E-04
50	GO:0004449: isocitrate dehydrogenase (NAD+) activity	8.43E-04
51	GO:0008106: alcohol dehydrogenase (NADP+) activity	8.43E-04
52	GO:0016656: monodehydroascorbate reductase (NADH) activity	8.43E-04
53	GO:0052656: L-isoleucine transaminase activity	8.43E-04
54	GO:0004834: tryptophan synthase activity	1.12E-03
55	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.12E-03
56	GO:0004084: branched-chain-amino-acid transaminase activity	1.12E-03
57	GO:0070628: proteasome binding	1.12E-03
58	GO:0004031: aldehyde oxidase activity	1.12E-03
59	GO:0050302: indole-3-acetaldehyde oxidase activity	1.12E-03
60	GO:0004791: thioredoxin-disulfide reductase activity	1.24E-03
61	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.74E-03
62	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.74E-03
63	GO:0035252: UDP-xylosyltransferase activity	1.74E-03
64	GO:0004126: cytidine deaminase activity	2.09E-03
65	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.09E-03
66	GO:0004017: adenylate kinase activity	2.09E-03
67	GO:0003872: 6-phosphofructokinase activity	2.45E-03
68	GO:0015140: malate transmembrane transporter activity	2.45E-03
69	GO:0043295: glutathione binding	2.45E-03
70	GO:0052747: sinapyl alcohol dehydrogenase activity	2.84E-03
71	GO:0004601: peroxidase activity	4.02E-03
72	GO:0004568: chitinase activity	4.58E-03
73	GO:0015386: potassium:proton antiporter activity	5.05E-03
74	GO:0008794: arsenate reductase (glutaredoxin) activity	5.05E-03
75	GO:0015116: sulfate transmembrane transporter activity	5.55E-03
76	GO:0045551: cinnamyl-alcohol dehydrogenase activity	5.55E-03
77	GO:0031624: ubiquitin conjugating enzyme binding	6.59E-03
78	GO:0008061: chitin binding	7.13E-03
79	GO:0005217: intracellular ligand-gated ion channel activity	7.13E-03
80	GO:0004970: ionotropic glutamate receptor activity	7.13E-03
81	GO:0015035: protein disulfide oxidoreductase activity	8.46E-03
82	GO:0010333: terpene synthase activity	9.46E-03
83	GO:0008810: cellulase activity	1.07E-02
84	GO:0003727: single-stranded RNA binding	1.14E-02
85	GO:0003756: protein disulfide isomerase activity	1.14E-02
86	GO:0047134: protein-disulfide reductase activity	1.20E-02
87	GO:0005199: structural constituent of cell wall	1.34E-02
88	GO:0008080: N-acetyltransferase activity	1.34E-02
89	GO:0001085: RNA polymerase II transcription factor binding	1.34E-02
90	GO:0003824: catalytic activity	1.41E-02
91	GO:0010181: FMN binding	1.41E-02
92	GO:0015385: sodium:proton antiporter activity	1.71E-02
93	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.71E-02
94	GO:0008237: metallopeptidase activity	1.86E-02
95	GO:0016597: amino acid binding	1.94E-02
96	GO:0102483: scopolin beta-glucosidase activity	2.27E-02
97	GO:0004806: triglyceride lipase activity	2.27E-02
98	GO:0016740: transferase activity	2.31E-02
99	GO:0050660: flavin adenine dinucleotide binding	2.56E-02
100	GO:0030145: manganese ion binding	2.71E-02
101	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.71E-02
102	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.71E-02
103	GO:0005507: copper ion binding	2.80E-02
104	GO:0061630: ubiquitin protein ligase activity	2.88E-02
105	GO:0003746: translation elongation factor activity	2.89E-02
106	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.08E-02
107	GO:0008422: beta-glucosidase activity	3.08E-02
108	GO:0042803: protein homodimerization activity	3.43E-02
109	GO:0051537: 2 iron, 2 sulfur cluster binding	3.66E-02
110	GO:0051287: NAD binding	3.96E-02
111	GO:0005506: iron ion binding	4.23E-02
112	GO:0009055: electron carrier activity	4.32E-02
113	GO:0016298: lipase activity	4.38E-02
114	GO:0008270: zinc ion binding	4.59E-02
115	GO:0031625: ubiquitin protein ligase binding	4.60E-02
116	GO:0045330: aspartyl esterase activity	4.60E-02
117	GO:0045735: nutrient reservoir activity	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	8.96E-05
2	GO:0032580: Golgi cisterna membrane	1.47E-04
3	GO:0045252: oxoglutarate dehydrogenase complex	1.58E-04
4	GO:0005829: cytosol	3.42E-04
5	GO:0009530: primary cell wall	5.89E-04
6	GO:0005945: 6-phosphofructokinase complex	1.41E-03
7	GO:0005783: endoplasmic reticulum	1.94E-03
8	GO:0005788: endoplasmic reticulum lumen	2.14E-03
9	GO:0005773: vacuole	2.80E-03
10	GO:0005811: lipid particle	3.25E-03
11	GO:0017119: Golgi transport complex	4.58E-03
12	GO:0005737: cytoplasm	8.54E-03
13	GO:0005794: Golgi apparatus	9.02E-03
14	GO:0005839: proteasome core complex	9.46E-03
15	GO:0016020: membrane	1.03E-02
16	GO:0005768: endosome	1.04E-02
17	GO:0005886: plasma membrane	1.28E-02
18	GO:0016592: mediator complex	1.63E-02
19	GO:0071944: cell periphery	1.71E-02
20	GO:0005667: transcription factor complex	2.19E-02
21	GO:0009506: plasmodesma	2.32E-02
22	GO:0000151: ubiquitin ligase complex	2.44E-02
23	GO:0009570: chloroplast stroma	3.22E-02
24	GO:0005802: trans-Golgi network	3.24E-02
25	GO:0090406: pollen tube	3.46E-02
26	GO:0000502: proteasome complex	4.28E-02
27	GO:0010008: endosome membrane	4.93E-02