Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G77420

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000117: negative regulation of cysteine-type endopeptidase activity0.00E+00
2GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
3GO:0010398: xylogalacturonan metabolic process0.00E+00
4GO:0016102: diterpenoid biosynthetic process0.00E+00
5GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
6GO:0072722: response to amitrole0.00E+00
7GO:0006903: vesicle targeting0.00E+00
8GO:0006216: cytidine catabolic process0.00E+00
9GO:0048034: heme O biosynthetic process0.00E+00
10GO:0046680: response to DDT0.00E+00
11GO:0006102: isocitrate metabolic process2.78E-06
12GO:0046283: anthocyanin-containing compound metabolic process4.65E-05
13GO:0006099: tricarboxylic acid cycle5.28E-05
14GO:0046686: response to cadmium ion7.06E-05
15GO:0042964: thioredoxin reduction1.98E-04
16GO:0010421: hydrogen peroxide-mediated programmed cell death1.98E-04
17GO:1901430: positive regulation of syringal lignin biosynthetic process1.98E-04
18GO:0000032: cell wall mannoprotein biosynthetic process1.98E-04
19GO:0030163: protein catabolic process2.08E-04
20GO:0009058: biosynthetic process3.86E-04
21GO:0080026: response to indolebutyric acid4.43E-04
22GO:0015709: thiosulfate transport4.43E-04
23GO:0071422: succinate transmembrane transport4.43E-04
24GO:0046939: nucleotide phosphorylation4.43E-04
25GO:0009805: coumarin biosynthetic process4.43E-04
26GO:0010372: positive regulation of gibberellin biosynthetic process4.43E-04
27GO:0006807: nitrogen compound metabolic process5.18E-04
28GO:0006517: protein deglycosylation7.22E-04
29GO:0010272: response to silver ion7.22E-04
30GO:0033591: response to L-ascorbic acid7.22E-04
31GO:0006591: ornithine metabolic process7.22E-04
32GO:0009062: fatty acid catabolic process7.22E-04
33GO:0055074: calcium ion homeostasis7.22E-04
34GO:0055114: oxidation-reduction process1.02E-03
35GO:0080024: indolebutyric acid metabolic process1.03E-03
36GO:0009298: GDP-mannose biosynthetic process1.03E-03
37GO:0015729: oxaloacetate transport1.03E-03
38GO:0006612: protein targeting to membrane1.03E-03
39GO:0006893: Golgi to plasma membrane transport1.03E-03
40GO:0009306: protein secretion1.24E-03
41GO:0006096: glycolytic process1.36E-03
42GO:1902584: positive regulation of response to water deprivation1.37E-03
43GO:0006564: L-serine biosynthetic process1.74E-03
44GO:0097428: protein maturation by iron-sulfur cluster transfer1.74E-03
45GO:0045927: positive regulation of growth1.74E-03
46GO:0000304: response to singlet oxygen1.74E-03
47GO:0071423: malate transmembrane transport1.74E-03
48GO:0098719: sodium ion import across plasma membrane1.74E-03
49GO:0009972: cytidine deamination2.14E-03
50GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly2.14E-03
51GO:0010264: myo-inositol hexakisphosphate biosynthetic process2.14E-03
52GO:0006555: methionine metabolic process2.14E-03
53GO:0009228: thiamine biosynthetic process2.14E-03
54GO:0035435: phosphate ion transmembrane transport2.14E-03
55GO:0009099: valine biosynthetic process2.57E-03
56GO:0009554: megasporogenesis2.57E-03
57GO:0080113: regulation of seed growth2.57E-03
58GO:0019509: L-methionine salvage from methylthioadenosine2.57E-03
59GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.57E-03
60GO:0034389: lipid particle organization2.57E-03
61GO:0009082: branched-chain amino acid biosynthetic process2.57E-03
62GO:0042744: hydrogen peroxide catabolic process2.69E-03
63GO:0009615: response to virus2.76E-03
64GO:0080027: response to herbivore3.03E-03
65GO:0080186: developmental vegetative growth3.03E-03
66GO:0071669: plant-type cell wall organization or biogenesis3.03E-03
67GO:0008272: sulfate transport3.03E-03
68GO:0009627: systemic acquired resistance3.07E-03
69GO:0006402: mRNA catabolic process3.51E-03
70GO:0006491: N-glycan processing3.51E-03
71GO:0009407: toxin catabolic process3.95E-03
72GO:0009097: isoleucine biosynthetic process4.02E-03
73GO:0010204: defense response signaling pathway, resistance gene-independent4.02E-03
74GO:0009699: phenylpropanoid biosynthetic process4.02E-03
75GO:0006002: fructose 6-phosphate metabolic process4.02E-03
76GO:0060321: acceptance of pollen4.02E-03
77GO:0019430: removal of superoxide radicals4.02E-03
78GO:0007186: G-protein coupled receptor signaling pathway4.02E-03
79GO:0010120: camalexin biosynthetic process4.02E-03
80GO:0006783: heme biosynthetic process4.54E-03
81GO:0046685: response to arsenic-containing substance4.54E-03
82GO:0009821: alkaloid biosynthetic process4.54E-03
83GO:0051453: regulation of intracellular pH5.10E-03
84GO:0009098: leucine biosynthetic process5.10E-03
85GO:0048354: mucilage biosynthetic process involved in seed coat development5.10E-03
86GO:0042742: defense response to bacterium5.63E-03
87GO:0006032: chitin catabolic process5.67E-03
88GO:0009688: abscisic acid biosynthetic process5.67E-03
89GO:0043069: negative regulation of programmed cell death5.67E-03
90GO:0000209: protein polyubiquitination6.09E-03
91GO:0000272: polysaccharide catabolic process6.27E-03
92GO:0009682: induced systemic resistance6.27E-03
93GO:0072593: reactive oxygen species metabolic process6.27E-03
94GO:0009636: response to toxic substance6.57E-03
95GO:0016925: protein sumoylation6.89E-03
96GO:0006790: sulfur compound metabolic process6.89E-03
97GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process7.08E-03
98GO:0009846: pollen germination7.34E-03
99GO:0055046: microgametogenesis7.52E-03
100GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process7.52E-03
101GO:0034605: cellular response to heat8.19E-03
102GO:0016192: vesicle-mediated transport8.38E-03
103GO:0015031: protein transport8.56E-03
104GO:0046854: phosphatidylinositol phosphorylation8.87E-03
105GO:0010053: root epidermal cell differentiation8.87E-03
106GO:0007031: peroxisome organization8.87E-03
107GO:0007030: Golgi organization8.87E-03
108GO:0010167: response to nitrate8.87E-03
109GO:0019853: L-ascorbic acid biosynthetic process8.87E-03
110GO:0000162: tryptophan biosynthetic process9.57E-03
111GO:0009626: plant-type hypersensitive response9.94E-03
112GO:0045333: cellular respiration1.03E-02
113GO:0006886: intracellular protein transport1.03E-02
114GO:0006511: ubiquitin-dependent protein catabolic process1.07E-02
115GO:0006874: cellular calcium ion homeostasis1.10E-02
116GO:0016998: cell wall macromolecule catabolic process1.18E-02
117GO:0015992: proton transport1.18E-02
118GO:0019915: lipid storage1.18E-02
119GO:0030433: ubiquitin-dependent ERAD pathway1.26E-02
120GO:0019748: secondary metabolic process1.26E-02
121GO:0009751: response to salicylic acid1.27E-02
122GO:0009753: response to jasmonic acid1.41E-02
123GO:0010089: xylem development1.42E-02
124GO:0009561: megagametogenesis1.42E-02
125GO:0051028: mRNA transport1.50E-02
126GO:0042631: cellular response to water deprivation1.59E-02
127GO:0045489: pectin biosynthetic process1.67E-02
128GO:0006814: sodium ion transport1.76E-02
129GO:0009646: response to absence of light1.76E-02
130GO:0009851: auxin biosynthetic process1.85E-02
131GO:0010183: pollen tube guidance1.85E-02
132GO:0006635: fatty acid beta-oxidation1.94E-02
133GO:0010150: leaf senescence1.95E-02
134GO:0006979: response to oxidative stress1.98E-02
135GO:0031047: gene silencing by RNA2.04E-02
136GO:1901657: glycosyl compound metabolic process2.13E-02
137GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.18E-02
138GO:0006914: autophagy2.23E-02
139GO:0009567: double fertilization forming a zygote and endosperm2.23E-02
140GO:0019760: glucosinolate metabolic process2.23E-02
141GO:0010252: auxin homeostasis2.23E-02
142GO:0006464: cellular protein modification process2.23E-02
143GO:0006904: vesicle docking involved in exocytosis2.33E-02
144GO:0071805: potassium ion transmembrane transport2.33E-02
145GO:0009617: response to bacterium2.33E-02
146GO:0009416: response to light stimulus2.66E-02
147GO:0006888: ER to Golgi vesicle-mediated transport2.84E-02
148GO:0009826: unidimensional cell growth2.91E-02
149GO:0016049: cell growth2.94E-02
150GO:0048767: root hair elongation3.16E-02
151GO:0006499: N-terminal protein myristoylation3.27E-02
152GO:0010043: response to zinc ion3.38E-02
153GO:0007568: aging3.38E-02
154GO:0045087: innate immune response3.61E-02
155GO:0050832: defense response to fungus3.62E-02
156GO:0006839: mitochondrial transport3.96E-02
157GO:0006887: exocytosis4.08E-02
158GO:0006952: defense response4.22E-02
159GO:0009744: response to sucrose4.32E-02
160GO:0051707: response to other organism4.32E-02
161GO:0045454: cell redox homeostasis4.46E-02
162GO:0031347: regulation of defense response4.95E-02
RankGO TermAdjusted P value
1GO:0008495: protoheme IX farnesyltransferase activity0.00E+00
2GO:0016504: peptidase activator activity0.00E+00
3GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
4GO:0051766: inositol trisphosphate kinase activity0.00E+00
5GO:0070577: lysine-acetylated histone binding0.00E+00
6GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
7GO:0051765: inositol tetrakisphosphate kinase activity0.00E+00
8GO:0080013: (E,E)-geranyllinalool synthase activity0.00E+00
9GO:0047844: deoxycytidine deaminase activity0.00E+00
10GO:0004449: isocitrate dehydrogenase (NAD+) activity4.86E-08
11GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity6.86E-05
12GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity6.86E-05
13GO:0000287: magnesium ion binding1.87E-04
14GO:0004518: nuclease activity1.90E-04
15GO:0019786: Atg8-specific protease activity1.98E-04
16GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity1.98E-04
17GO:0016229: steroid dehydrogenase activity1.98E-04
18GO:0004425: indole-3-glycerol-phosphate synthase activity1.98E-04
19GO:0000824: inositol tetrakisphosphate 3-kinase activity1.98E-04
20GO:0070401: NADP+ binding1.98E-04
21GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity1.98E-04
22GO:0047326: inositol tetrakisphosphate 5-kinase activity1.98E-04
23GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity1.98E-04
24GO:0048037: cofactor binding1.98E-04
25GO:0004476: mannose-6-phosphate isomerase activity1.98E-04
26GO:0030955: potassium ion binding2.92E-04
27GO:0004743: pyruvate kinase activity2.92E-04
28GO:0015117: thiosulfate transmembrane transporter activity4.43E-04
29GO:1901677: phosphate transmembrane transporter activity4.43E-04
30GO:0004776: succinate-CoA ligase (GDP-forming) activity4.43E-04
31GO:0052739: phosphatidylserine 1-acylhydrolase activity4.43E-04
32GO:0010297: heteropolysaccharide binding4.43E-04
33GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity4.43E-04
34GO:0004617: phosphoglycerate dehydrogenase activity4.43E-04
35GO:0008805: carbon-monoxide oxygenase activity4.43E-04
36GO:0004775: succinate-CoA ligase (ADP-forming) activity4.43E-04
37GO:0019779: Atg8 activating enzyme activity4.43E-04
38GO:0019172: glyoxalase III activity4.43E-04
39GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity7.22E-04
40GO:0005310: dicarboxylic acid transmembrane transporter activity7.22E-04
41GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity7.22E-04
42GO:0015141: succinate transmembrane transporter activity7.22E-04
43GO:0051287: NAD binding9.66E-04
44GO:0052656: L-isoleucine transaminase activity1.03E-03
45GO:0004165: dodecenoyl-CoA delta-isomerase activity1.03E-03
46GO:0052654: L-leucine transaminase activity1.03E-03
47GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity1.03E-03
48GO:0017077: oxidative phosphorylation uncoupler activity1.03E-03
49GO:0052655: L-valine transaminase activity1.03E-03
50GO:0019201: nucleotide kinase activity1.03E-03
51GO:0015131: oxaloacetate transmembrane transporter activity1.03E-03
52GO:0004601: peroxidase activity1.13E-03
53GO:0019776: Atg8 ligase activity1.37E-03
54GO:0004930: G-protein coupled receptor activity1.37E-03
55GO:0010279: indole-3-acetic acid amido synthetase activity1.37E-03
56GO:0004659: prenyltransferase activity1.37E-03
57GO:0004084: branched-chain-amino-acid transaminase activity1.37E-03
58GO:0070628: proteasome binding1.37E-03
59GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity1.37E-03
60GO:0004031: aldehyde oxidase activity1.37E-03
61GO:0050302: indole-3-acetaldehyde oxidase activity1.37E-03
62GO:0031386: protein tag1.74E-03
63GO:0008374: O-acyltransferase activity1.74E-03
64GO:0035252: UDP-xylosyltransferase activity2.14E-03
65GO:0036402: proteasome-activating ATPase activity2.14E-03
66GO:0031593: polyubiquitin binding2.14E-03
67GO:0004126: cytidine deaminase activity2.57E-03
68GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.57E-03
69GO:0004017: adenylate kinase activity2.57E-03
70GO:0008320: protein transmembrane transporter activity3.03E-03
71GO:0043295: glutathione binding3.03E-03
72GO:0003872: 6-phosphofructokinase activity3.03E-03
73GO:0015140: malate transmembrane transporter activity3.03E-03
74GO:0004311: farnesyltranstransferase activity3.51E-03
75GO:0004033: aldo-keto reductase (NADP) activity3.51E-03
76GO:0008970: phosphatidylcholine 1-acylhydrolase activity4.02E-03
77GO:0046872: metal ion binding4.20E-03
78GO:0003746: translation elongation factor activity4.54E-03
79GO:0016844: strictosidine synthase activity5.10E-03
80GO:0004364: glutathione transferase activity5.62E-03
81GO:0004568: chitinase activity5.67E-03
82GO:0015386: potassium:proton antiporter activity6.27E-03
83GO:0008794: arsenate reductase (glutaredoxin) activity6.27E-03
84GO:0003824: catalytic activity6.63E-03
85GO:0015116: sulfate transmembrane transporter activity6.89E-03
86GO:0031624: ubiquitin conjugating enzyme binding8.19E-03
87GO:0061630: ubiquitin protein ligase activity8.38E-03
88GO:0004970: ionotropic glutamate receptor activity8.87E-03
89GO:0005217: intracellular ligand-gated ion channel activity8.87E-03
90GO:0004190: aspartic-type endopeptidase activity8.87E-03
91GO:0017025: TBP-class protein binding8.87E-03
92GO:0008061: chitin binding8.87E-03
93GO:0010333: terpene synthase activity1.18E-02
94GO:0004298: threonine-type endopeptidase activity1.18E-02
95GO:0009055: electron carrier activity1.41E-02
96GO:0030170: pyridoxal phosphate binding1.57E-02
97GO:0005199: structural constituent of cell wall1.67E-02
98GO:0008080: N-acetyltransferase activity1.67E-02
99GO:0001085: RNA polymerase II transcription factor binding1.67E-02
100GO:0004791: thioredoxin-disulfide reductase activity1.76E-02
101GO:0015385: sodium:proton antiporter activity2.13E-02
102GO:0008237: metallopeptidase activity2.33E-02
103GO:0016597: amino acid binding2.42E-02
104GO:0008270: zinc ion binding2.46E-02
105GO:0051213: dioxygenase activity2.53E-02
106GO:0000166: nucleotide binding2.66E-02
107GO:0016798: hydrolase activity, acting on glycosyl bonds2.84E-02
108GO:0102483: scopolin beta-glucosidase activity2.84E-02
109GO:0043531: ADP binding3.31E-02
110GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding3.38E-02
111GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.38E-02
112GO:0050660: flavin adenine dinucleotide binding3.49E-02
113GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.61E-02
114GO:0003993: acid phosphatase activity3.73E-02
115GO:0020037: heme binding3.82E-02
116GO:0008422: beta-glucosidase activity3.84E-02
117GO:0005507: copper ion binding4.12E-02
118GO:0051537: 2 iron, 2 sulfur cluster binding4.57E-02
119GO:0005198: structural molecule activity4.70E-02
120GO:0004722: protein serine/threonine phosphatase activity4.89E-02
RankGO TermAdjusted P value
1GO:0005829: cytosol4.44E-07
2GO:0000502: proteasome complex1.34E-04
3GO:0016442: RISC complex1.98E-04
4GO:0009530: primary cell wall7.22E-04
5GO:0030130: clathrin coat of trans-Golgi network vesicle7.22E-04
6GO:0030132: clathrin coat of coated pit7.22E-04
7GO:0005839: proteasome core complex9.64E-04
8GO:0005775: vacuolar lumen1.03E-03
9GO:0005737: cytoplasm1.22E-03
10GO:0005776: autophagosome1.37E-03
11GO:0005945: 6-phosphofructokinase complex1.74E-03
12GO:0030127: COPII vesicle coat2.14E-03
13GO:0032580: Golgi cisterna membrane2.32E-03
14GO:0005886: plasma membrane2.56E-03
15GO:0031597: cytosolic proteasome complex2.57E-03
16GO:0030173: integral component of Golgi membrane2.57E-03
17GO:0031595: nuclear proteasome complex3.03E-03
18GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane3.03E-03
19GO:0000421: autophagosome membrane3.51E-03
20GO:0031982: vesicle3.51E-03
21GO:0005811: lipid particle4.02E-03
22GO:0019773: proteasome core complex, alpha-subunit complex4.02E-03
23GO:0005783: endoplasmic reticulum4.40E-03
24GO:0031090: organelle membrane4.54E-03
25GO:0010494: cytoplasmic stress granule4.54E-03
26GO:0031901: early endosome membrane4.54E-03
27GO:0008540: proteasome regulatory particle, base subcomplex5.10E-03
28GO:0008541: proteasome regulatory particle, lid subcomplex6.27E-03
29GO:0048471: perinuclear region of cytoplasm6.27E-03
30GO:0005635: nuclear envelope8.44E-03
31GO:0031410: cytoplasmic vesicle1.26E-02
32GO:0005773: vacuole1.56E-02
33GO:0005774: vacuolar membrane1.76E-02
34GO:0000145: exocyst2.04E-02
35GO:0016592: mediator complex2.04E-02
36GO:0005794: Golgi apparatus2.08E-02
37GO:0005618: cell wall2.27E-02
38GO:0005778: peroxisomal membrane2.33E-02
39GO:0000932: P-body2.53E-02
40GO:0005788: endoplasmic reticulum lumen2.63E-02
41GO:0005667: transcription factor complex2.73E-02
42GO:0005643: nuclear pore3.05E-02
43GO:0000151: ubiquitin ligase complex3.05E-02
44GO:0005777: peroxisome3.16E-02
45GO:0090406: pollen tube4.32E-02
46GO:0005856: cytoskeleton4.70E-02
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Gene type



Gene DE type