co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G76930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010324: membrane invagination	0.00E+00
2	GO:0010055: atrichoblast differentiation	0.00E+00
3	GO:1902001: fatty acid transmembrane transport	0.00E+00
4	GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	0.00E+00
5	GO:0090359: negative regulation of abscisic acid biosynthetic process	0.00E+00
6	GO:0015690: aluminum cation transport	0.00E+00
7	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
8	GO:0019725: cellular homeostasis	2.51E-06
9	GO:0010186: positive regulation of cellular defense response	9.11E-06
10	GO:0006979: response to oxidative stress	3.54E-05
11	GO:0060548: negative regulation of cell death	3.78E-05
12	GO:0009164: nucleoside catabolic process	6.05E-05
13	GO:0006952: defense response	6.24E-05
14	GO:0009643: photosynthetic acclimation	8.88E-05
15	GO:0071456: cellular response to hypoxia	9.74E-05
16	GO:0009625: response to insect	1.11E-04
17	GO:0010150: leaf senescence	1.27E-04
18	GO:0042391: regulation of membrane potential	1.58E-04
19	GO:1990542: mitochondrial transmembrane transport	2.32E-04
20	GO:0090421: embryonic meristem initiation	2.32E-04
21	GO:0032107: regulation of response to nutrient levels	2.32E-04
22	GO:0048508: embryonic meristem development	2.32E-04
23	GO:0015760: glucose-6-phosphate transport	2.32E-04
24	GO:0019567: arabinose biosynthetic process	2.32E-04
25	GO:0080173: male-female gamete recognition during double fertilization	2.32E-04
26	GO:0033306: phytol metabolic process	2.32E-04
27	GO:0009700: indole phytoalexin biosynthetic process	2.32E-04
28	GO:0009270: response to humidity	2.32E-04
29	GO:0010120: camalexin biosynthetic process	2.55E-04
30	GO:0010112: regulation of systemic acquired resistance	3.09E-04
31	GO:0080181: lateral root branching	5.15E-04
32	GO:0055088: lipid homeostasis	5.15E-04
33	GO:0019521: D-gluconate metabolic process	5.15E-04
34	GO:0015908: fatty acid transport	5.15E-04
35	GO:0044419: interspecies interaction between organisms	5.15E-04
36	GO:0009945: radial axis specification	5.15E-04
37	GO:0015712: hexose phosphate transport	5.15E-04
38	GO:0051258: protein polymerization	5.15E-04
39	GO:0010115: regulation of abscisic acid biosynthetic process	5.15E-04
40	GO:0000719: photoreactive repair	5.15E-04
41	GO:0010271: regulation of chlorophyll catabolic process	5.15E-04
42	GO:0071668: plant-type cell wall assembly	5.15E-04
43	GO:0009225: nucleotide-sugar metabolic process	8.11E-04
44	GO:0045793: positive regulation of cell size	8.37E-04
45	GO:0015695: organic cation transport	8.37E-04
46	GO:0015714: phosphoenolpyruvate transport	8.37E-04
47	GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	8.37E-04
48	GO:1900055: regulation of leaf senescence	8.37E-04
49	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	8.37E-04
50	GO:0006954: inflammatory response	8.37E-04
51	GO:0035436: triose phosphate transmembrane transport	8.37E-04
52	GO:2000377: regulation of reactive oxygen species metabolic process	9.95E-04
53	GO:0051707: response to other organism	1.01E-03
54	GO:0009636: response to toxic substance	1.17E-03
55	GO:0006020: inositol metabolic process	1.19E-03
56	GO:0015696: ammonium transport	1.19E-03
57	GO:0051289: protein homotetramerization	1.19E-03
58	GO:1901141: regulation of lignin biosynthetic process	1.59E-03
59	GO:0010109: regulation of photosynthesis	1.59E-03
60	GO:0045227: capsule polysaccharide biosynthetic process	1.59E-03
61	GO:0048638: regulation of developmental growth	1.59E-03
62	GO:0072488: ammonium transmembrane transport	1.59E-03
63	GO:0033358: UDP-L-arabinose biosynthetic process	1.59E-03
64	GO:0015713: phosphoglycerate transport	1.59E-03
65	GO:0009626: plant-type hypersensitive response	1.97E-03
66	GO:0016094: polyprenol biosynthetic process	2.03E-03
67	GO:0034052: positive regulation of plant-type hypersensitive response	2.03E-03
68	GO:0009646: response to absence of light	2.09E-03
69	GO:0010193: response to ozone	2.40E-03
70	GO:0009759: indole glucosinolate biosynthetic process	2.50E-03
71	GO:0009117: nucleotide metabolic process	2.50E-03
72	GO:0009094: L-phenylalanine biosynthetic process	3.00E-03
73	GO:0042372: phylloquinone biosynthetic process	3.00E-03
74	GO:0009942: longitudinal axis specification	3.00E-03
75	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.54E-03
76	GO:0071446: cellular response to salicylic acid stimulus	3.54E-03
77	GO:1900056: negative regulation of leaf senescence	3.54E-03
78	GO:0050829: defense response to Gram-negative bacterium	3.54E-03
79	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	3.54E-03
80	GO:0006950: response to stress	4.07E-03
81	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.10E-03
82	GO:0009819: drought recovery	4.10E-03
83	GO:0043068: positive regulation of programmed cell death	4.10E-03
84	GO:2000031: regulation of salicylic acid mediated signaling pathway	4.70E-03
85	GO:0010208: pollen wall assembly	4.70E-03
86	GO:0009880: embryonic pattern specification	4.70E-03
87	GO:0010204: defense response signaling pathway, resistance gene-independent	4.70E-03
88	GO:0010311: lateral root formation	4.73E-03
89	GO:0009407: toxin catabolic process	4.97E-03
90	GO:0048527: lateral root development	5.21E-03
91	GO:0009056: catabolic process	5.32E-03
92	GO:0001708: cell fate specification	5.32E-03
93	GO:0006098: pentose-phosphate shunt	5.32E-03
94	GO:0019432: triglyceride biosynthetic process	5.32E-03
95	GO:0046916: cellular transition metal ion homeostasis	5.32E-03
96	GO:0007166: cell surface receptor signaling pathway	5.45E-03
97	GO:0009617: response to bacterium	5.75E-03
98	GO:0009638: phototropism	5.97E-03
99	GO:0090332: stomatal closure	5.97E-03
100	GO:0048268: clathrin coat assembly	5.97E-03
101	GO:0010380: regulation of chlorophyll biosynthetic process	5.97E-03
102	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.97E-03
103	GO:0008202: steroid metabolic process	5.97E-03
104	GO:0009870: defense response signaling pathway, resistance gene-dependent	6.65E-03
105	GO:0006032: chitin catabolic process	6.65E-03
106	GO:0006887: exocytosis	6.78E-03
107	GO:0006897: endocytosis	6.78E-03
108	GO:0048229: gametophyte development	7.35E-03
109	GO:0009682: induced systemic resistance	7.35E-03
110	GO:0072593: reactive oxygen species metabolic process	7.35E-03
111	GO:0050832: defense response to fungus	7.46E-03
112	GO:0042742: defense response to bacterium	8.43E-03
113	GO:0009785: blue light signaling pathway	8.84E-03
114	GO:0031347: regulation of defense response	8.91E-03
115	GO:0009266: response to temperature stimulus	9.62E-03
116	GO:0046688: response to copper ion	1.04E-02
117	GO:0080167: response to karrikin	1.05E-02
118	GO:0009737: response to abscisic acid	1.08E-02
119	GO:0010200: response to chitin	1.10E-02
120	GO:0080147: root hair cell development	1.21E-02
121	GO:0015979: photosynthesis	1.25E-02
122	GO:0006825: copper ion transport	1.30E-02
123	GO:0006874: cellular calcium ion homeostasis	1.30E-02
124	GO:0016998: cell wall macromolecule catabolic process	1.39E-02
125	GO:0009624: response to nematode	1.42E-02
126	GO:0006012: galactose metabolic process	1.57E-02
127	GO:0009411: response to UV	1.57E-02
128	GO:0009408: response to heat	1.73E-02
129	GO:0070417: cellular response to cold	1.77E-02
130	GO:0000413: protein peptidyl-prolyl isomerization	1.87E-02
131	GO:0042631: cellular response to water deprivation	1.87E-02
132	GO:0000271: polysaccharide biosynthetic process	1.87E-02
133	GO:0048868: pollen tube development	1.97E-02
134	GO:0045489: pectin biosynthetic process	1.97E-02
135	GO:0009790: embryo development	2.08E-02
136	GO:0009749: response to glucose	2.18E-02
137	GO:0071554: cell wall organization or biogenesis	2.29E-02
138	GO:0000302: response to reactive oxygen species	2.29E-02
139	GO:0009630: gravitropism	2.40E-02
140	GO:0006468: protein phosphorylation	2.40E-02
141	GO:0019761: glucosinolate biosynthetic process	2.40E-02
142	GO:0009414: response to water deprivation	2.66E-02
143	GO:0006904: vesicle docking involved in exocytosis	2.74E-02
144	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.10E-02
145	GO:0009627: systemic acquired resistance	3.22E-02
146	GO:0006906: vesicle fusion	3.22E-02
147	GO:0009416: response to light stimulus	3.54E-02
148	GO:0009611: response to wounding	3.64E-02
149	GO:0009832: plant-type cell wall biogenesis	3.72E-02
150	GO:0007568: aging	3.98E-02
151	GO:0009910: negative regulation of flower development	3.98E-02
152	GO:0009631: cold acclimation	3.98E-02
153	GO:0010119: regulation of stomatal movement	3.98E-02
154	GO:0009853: photorespiration	4.25E-02
155	GO:0016051: carbohydrate biosynthetic process	4.25E-02
156	GO:0009409: response to cold	4.27E-02
157	GO:0009723: response to ethylene	4.38E-02
158	GO:0030001: metal ion transport	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0004610: phosphoacetylglucosamine mutase activity	0.00E+00
2	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
3	GO:0030552: cAMP binding	4.48E-05
4	GO:0030553: cGMP binding	4.48E-05
5	GO:0005216: ion channel activity	7.33E-05
6	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	1.23E-04
7	GO:0005249: voltage-gated potassium channel activity	1.58E-04
8	GO:0030551: cyclic nucleotide binding	1.58E-04
9	GO:0005544: calcium-dependent phospholipid binding	2.06E-04
10	GO:0019901: protein kinase binding	2.16E-04
11	GO:0015245: fatty acid transporter activity	2.32E-04
12	GO:2001227: quercitrin binding	2.32E-04
13	GO:0019707: protein-cysteine S-acyltransferase activity	2.32E-04
14	GO:0047940: glucuronokinase activity	2.32E-04
15	GO:2001147: camalexin binding	2.32E-04
16	GO:0047364: desulfoglucosinolate sulfotransferase activity	5.15E-04
17	GO:0015152: glucose-6-phosphate transmembrane transporter activity	5.15E-04
18	GO:0004385: guanylate kinase activity	5.15E-04
19	GO:0071917: triose-phosphate transmembrane transporter activity	8.37E-04
20	GO:0004324: ferredoxin-NADP+ reductase activity	8.37E-04
21	GO:0016531: copper chaperone activity	8.37E-04
22	GO:0032403: protein complex binding	8.37E-04
23	GO:0017077: oxidative phosphorylation uncoupler activity	1.19E-03
24	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.55E-03
25	GO:0015120: phosphoglycerate transmembrane transporter activity	1.59E-03
26	GO:0050373: UDP-arabinose 4-epimerase activity	1.59E-03
27	GO:0047769: arogenate dehydratase activity	1.59E-03
28	GO:0004737: pyruvate decarboxylase activity	1.59E-03
29	GO:0004664: prephenate dehydratase activity	1.59E-03
30	GO:0050378: UDP-glucuronate 4-epimerase activity	1.59E-03
31	GO:0009916: alternative oxidase activity	1.59E-03
32	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.03E-03
33	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.03E-03
34	GO:0002094: polyprenyltransferase activity	2.03E-03
35	GO:0005496: steroid binding	2.03E-03
36	GO:0047631: ADP-ribose diphosphatase activity	2.03E-03
37	GO:0008519: ammonium transmembrane transporter activity	2.50E-03
38	GO:0030976: thiamine pyrophosphate binding	2.50E-03
39	GO:0000210: NAD+ diphosphatase activity	2.50E-03
40	GO:0003950: NAD+ ADP-ribosyltransferase activity	3.00E-03
41	GO:0005261: cation channel activity	3.00E-03
42	GO:0003978: UDP-glucose 4-epimerase activity	3.00E-03
43	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	3.00E-03
44	GO:0004144: diacylglycerol O-acyltransferase activity	3.00E-03
45	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.08E-03
46	GO:0016831: carboxy-lyase activity	3.54E-03
47	GO:0043295: glutathione binding	3.54E-03
48	GO:0008375: acetylglucosaminyltransferase activity	3.86E-03
49	GO:0004714: transmembrane receptor protein tyrosine kinase activity	4.10E-03
50	GO:0004033: aldo-keto reductase (NADP) activity	4.10E-03
51	GO:0008142: oxysterol binding	4.70E-03
52	GO:0005516: calmodulin binding	5.02E-03
53	GO:0047617: acyl-CoA hydrolase activity	5.97E-03
54	GO:0050661: NADP binding	6.50E-03
55	GO:0004568: chitinase activity	6.65E-03
56	GO:0005545: 1-phosphatidylinositol binding	6.65E-03
57	GO:0004364: glutathione transferase activity	7.07E-03
58	GO:0005509: calcium ion binding	7.32E-03
59	GO:0008559: xenobiotic-transporting ATPase activity	7.35E-03
60	GO:0004674: protein serine/threonine kinase activity	8.59E-03
61	GO:0005315: inorganic phosphate transmembrane transporter activity	8.84E-03
62	GO:0008266: poly(U) RNA binding	9.62E-03
63	GO:0016757: transferase activity, transferring glycosyl groups	9.96E-03
64	GO:0008146: sulfotransferase activity	1.04E-02
65	GO:0005217: intracellular ligand-gated ion channel activity	1.04E-02
66	GO:0004970: ionotropic glutamate receptor activity	1.04E-02
67	GO:0004497: monooxygenase activity	1.05E-02
68	GO:0001046: core promoter sequence-specific DNA binding	1.21E-02
69	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.39E-02
70	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.48E-02
71	GO:0016301: kinase activity	1.54E-02
72	GO:0005507: copper ion binding	1.63E-02
73	GO:0030276: clathrin binding	1.97E-02
74	GO:0050662: coenzyme binding	2.07E-02
75	GO:0015297: antiporter activity	2.34E-02
76	GO:0043565: sequence-specific DNA binding	2.34E-02
77	GO:0004197: cysteine-type endopeptidase activity	2.40E-02
78	GO:0005524: ATP binding	2.67E-02
79	GO:0016413: O-acetyltransferase activity	2.86E-02
80	GO:0016597: amino acid binding	2.86E-02
81	GO:0016787: hydrolase activity	3.09E-02
82	GO:0004806: triglyceride lipase activity	3.34E-02
83	GO:0030247: polysaccharide binding	3.34E-02
84	GO:0004721: phosphoprotein phosphatase activity	3.34E-02
85	GO:0046872: metal ion binding	3.49E-02
86	GO:0015238: drug transmembrane transporter activity	3.72E-02
87	GO:0050897: cobalt ion binding	3.98E-02
88	GO:0043531: ADP binding	4.15E-02
89	GO:0050660: flavin adenine dinucleotide binding	4.38E-02
90	GO:0000149: SNARE binding	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0016021: integral component of membrane	6.07E-07
3	GO:0005886: plasma membrane	8.46E-06
4	GO:0000138: Golgi trans cisterna	2.32E-04
5	GO:0005802: trans-Golgi network	4.12E-04
6	GO:0005901: caveola	5.15E-04
7	GO:0005794: Golgi apparatus	7.78E-04
8	GO:0008287: protein serine/threonine phosphatase complex	8.37E-04
9	GO:0070062: extracellular exosome	1.19E-03
10	GO:0005768: endosome	1.99E-03
11	GO:0000813: ESCRT I complex	2.03E-03
12	GO:0032580: Golgi cisterna membrane	2.90E-03
13	GO:0016363: nuclear matrix	3.00E-03
14	GO:0005887: integral component of plasma membrane	6.38E-03
15	GO:0005578: proteinaceous extracellular matrix	8.84E-03
16	GO:0031012: extracellular matrix	8.84E-03
17	GO:0005769: early endosome	1.13E-02
18	GO:0005777: peroxisome	1.18E-02
19	GO:0005758: mitochondrial intermembrane space	1.21E-02
20	GO:0070469: respiratory chain	1.30E-02
21	GO:0005905: clathrin-coated pit	1.39E-02
22	GO:0009506: plasmodesma	1.75E-02
23	GO:0030136: clathrin-coated vesicle	1.77E-02
24	GO:0000145: exocyst	2.40E-02
25	GO:0000325: plant-type vacuole	3.98E-02
26	GO:0031201: SNARE complex	4.81E-02