GO Enrichment Analysis of Co-expressed Genes with
AT1G76640
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036258: multivesicular body assembly | 0.00E+00 |
| 2 | GO:0046680: response to DDT | 0.00E+00 |
| 3 | GO:2000117: negative regulation of cysteine-type endopeptidase activity | 0.00E+00 |
| 4 | GO:0010499: proteasomal ubiquitin-independent protein catabolic process | 0.00E+00 |
| 5 | GO:0016102: diterpenoid biosynthetic process | 0.00E+00 |
| 6 | GO:0070070: proton-transporting V-type ATPase complex assembly | 0.00E+00 |
| 7 | GO:0006858: extracellular transport | 0.00E+00 |
| 8 | GO:0006461: protein complex assembly | 1.24E-05 |
| 9 | GO:0006102: isocitrate metabolic process | 4.79E-05 |
| 10 | GO:0000032: cell wall mannoprotein biosynthetic process | 8.96E-05 |
| 11 | GO:1901430: positive regulation of syringal lignin biosynthetic process | 8.96E-05 |
| 12 | GO:0006099: tricarboxylic acid cycle | 1.38E-04 |
| 13 | GO:0006807: nitrogen compound metabolic process | 1.73E-04 |
| 14 | GO:0006996: organelle organization | 2.12E-04 |
| 15 | GO:0010372: positive regulation of gibberellin biosynthetic process | 2.12E-04 |
| 16 | GO:0045039: protein import into mitochondrial inner membrane | 3.54E-04 |
| 17 | GO:0033591: response to L-ascorbic acid | 3.54E-04 |
| 18 | GO:0006511: ubiquitin-dependent protein catabolic process | 4.05E-04 |
| 19 | GO:0046686: response to cadmium ion | 4.18E-04 |
| 20 | GO:0070676: intralumenal vesicle formation | 5.10E-04 |
| 21 | GO:0009298: GDP-mannose biosynthetic process | 5.10E-04 |
| 22 | GO:0070072: vacuolar proton-transporting V-type ATPase complex assembly | 5.10E-04 |
| 23 | GO:0015991: ATP hydrolysis coupled proton transport | 5.13E-04 |
| 24 | GO:0009646: response to absence of light | 5.92E-04 |
| 25 | GO:0009058: biosynthetic process | 6.28E-04 |
| 26 | GO:0051205: protein insertion into membrane | 6.78E-04 |
| 27 | GO:0030163: protein catabolic process | 7.66E-04 |
| 28 | GO:0000304: response to singlet oxygen | 8.59E-04 |
| 29 | GO:0098719: sodium ion import across plasma membrane | 8.59E-04 |
| 30 | GO:0006564: L-serine biosynthetic process | 8.59E-04 |
| 31 | GO:0007035: vacuolar acidification | 1.05E-03 |
| 32 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.05E-03 |
| 33 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.25E-03 |
| 34 | GO:0080027: response to herbivore | 1.46E-03 |
| 35 | GO:0000338: protein deneddylation | 1.46E-03 |
| 36 | GO:0006402: mRNA catabolic process | 1.69E-03 |
| 37 | GO:0010120: camalexin biosynthetic process | 1.93E-03 |
| 38 | GO:0006972: hyperosmotic response | 1.93E-03 |
| 39 | GO:0009821: alkaloid biosynthetic process | 2.18E-03 |
| 40 | GO:0006754: ATP biosynthetic process | 2.18E-03 |
| 41 | GO:0046685: response to arsenic-containing substance | 2.18E-03 |
| 42 | GO:0051453: regulation of intracellular pH | 2.43E-03 |
| 43 | GO:0009688: abscisic acid biosynthetic process | 2.70E-03 |
| 44 | GO:0043069: negative regulation of programmed cell death | 2.70E-03 |
| 45 | GO:0072593: reactive oxygen species metabolic process | 2.98E-03 |
| 46 | GO:0009682: induced systemic resistance | 2.98E-03 |
| 47 | GO:0006096: glycolytic process | 3.15E-03 |
| 48 | GO:0006790: sulfur compound metabolic process | 3.26E-03 |
| 49 | GO:0034605: cellular response to heat | 3.86E-03 |
| 50 | GO:0019853: L-ascorbic acid biosynthetic process | 4.18E-03 |
| 51 | GO:0046854: phosphatidylinositol phosphorylation | 4.18E-03 |
| 52 | GO:0042744: hydrogen peroxide catabolic process | 5.38E-03 |
| 53 | GO:0006366: transcription from RNA polymerase II promoter | 5.52E-03 |
| 54 | GO:0030433: ubiquitin-dependent ERAD pathway | 5.87E-03 |
| 55 | GO:0009561: megagametogenesis | 6.61E-03 |
| 56 | GO:0009306: protein secretion | 6.61E-03 |
| 57 | GO:0010089: xylem development | 6.61E-03 |
| 58 | GO:0009611: response to wounding | 6.85E-03 |
| 59 | GO:0042147: retrograde transport, endosome to Golgi | 6.99E-03 |
| 60 | GO:0010118: stomatal movement | 7.37E-03 |
| 61 | GO:0009617: response to bacterium | 7.79E-03 |
| 62 | GO:0015986: ATP synthesis coupled proton transport | 8.17E-03 |
| 63 | GO:0006814: sodium ion transport | 8.17E-03 |
| 64 | GO:0055072: iron ion homeostasis | 8.58E-03 |
| 65 | GO:0009851: auxin biosynthetic process | 8.58E-03 |
| 66 | GO:0031047: gene silencing by RNA | 9.42E-03 |
| 67 | GO:0006464: cellular protein modification process | 1.03E-02 |
| 68 | GO:0006914: autophagy | 1.03E-02 |
| 69 | GO:0071805: potassium ion transmembrane transport | 1.07E-02 |
| 70 | GO:0009615: response to virus | 1.17E-02 |
| 71 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.31E-02 |
| 72 | GO:0048573: photoperiodism, flowering | 1.31E-02 |
| 73 | GO:0006950: response to stress | 1.31E-02 |
| 74 | GO:0010311: lateral root formation | 1.46E-02 |
| 75 | GO:0009407: toxin catabolic process | 1.51E-02 |
| 76 | GO:0006886: intracellular protein transport | 1.55E-02 |
| 77 | GO:0010043: response to zinc ion | 1.56E-02 |
| 78 | GO:0007568: aging | 1.56E-02 |
| 79 | GO:0042742: defense response to bacterium | 1.63E-02 |
| 80 | GO:0045087: innate immune response | 1.66E-02 |
| 81 | GO:0009751: response to salicylic acid | 1.83E-02 |
| 82 | GO:0006897: endocytosis | 1.88E-02 |
| 83 | GO:0050832: defense response to fungus | 1.93E-02 |
| 84 | GO:0009640: photomorphogenesis | 1.99E-02 |
| 85 | GO:0009753: response to jasmonic acid | 1.99E-02 |
| 86 | GO:0009744: response to sucrose | 1.99E-02 |
| 87 | GO:0009636: response to toxic substance | 2.16E-02 |
| 88 | GO:0015031: protein transport | 2.21E-02 |
| 89 | GO:0006855: drug transmembrane transport | 2.22E-02 |
| 90 | GO:0031347: regulation of defense response | 2.28E-02 |
| 91 | GO:0009651: response to salt stress | 2.31E-02 |
| 92 | GO:0009664: plant-type cell wall organization | 2.34E-02 |
| 93 | GO:0009809: lignin biosynthetic process | 2.46E-02 |
| 94 | GO:0006486: protein glycosylation | 2.46E-02 |
| 95 | GO:0009585: red, far-red light phototransduction | 2.46E-02 |
| 96 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.52E-02 |
| 97 | GO:0009620: response to fungus | 2.96E-02 |
| 98 | GO:0009624: response to nematode | 3.16E-02 |
| 99 | GO:0009416: response to light stimulus | 3.29E-02 |
| 100 | GO:0055085: transmembrane transport | 4.17E-02 |
| 101 | GO:0010150: leaf senescence | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080013: (E,E)-geranyllinalool synthase activity | 0.00E+00 |
| 2 | GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group | 0.00E+00 |
| 3 | GO:0016504: peptidase activator activity | 0.00E+00 |
| 4 | GO:0070577: lysine-acetylated histone binding | 0.00E+00 |
| 5 | GO:0047720: indoleacetaldoxime dehydratase activity | 0.00E+00 |
| 6 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 3.91E-06 |
| 7 | GO:0000287: magnesium ion binding | 1.68E-05 |
| 8 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 1.89E-05 |
| 9 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 1.89E-05 |
| 10 | GO:0019786: Atg8-specific protease activity | 8.96E-05 |
| 11 | GO:0048037: cofactor binding | 8.96E-05 |
| 12 | GO:0004476: mannose-6-phosphate isomerase activity | 8.96E-05 |
| 13 | GO:0030955: potassium ion binding | 9.17E-05 |
| 14 | GO:0004743: pyruvate kinase activity | 9.17E-05 |
| 15 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 2.12E-04 |
| 16 | GO:0019779: Atg8 activating enzyme activity | 2.12E-04 |
| 17 | GO:0008517: folic acid transporter activity | 2.12E-04 |
| 18 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 2.12E-04 |
| 19 | GO:0004617: phosphoglycerate dehydrogenase activity | 2.12E-04 |
| 20 | GO:0004298: threonine-type endopeptidase activity | 3.38E-04 |
| 21 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 3.54E-04 |
| 22 | GO:0070628: proteasome binding | 6.78E-04 |
| 23 | GO:0004031: aldehyde oxidase activity | 6.78E-04 |
| 24 | GO:0050302: indole-3-acetaldehyde oxidase activity | 6.78E-04 |
| 25 | GO:0019776: Atg8 ligase activity | 6.78E-04 |
| 26 | GO:0031593: polyubiquitin binding | 1.05E-03 |
| 27 | GO:0051117: ATPase binding | 1.05E-03 |
| 28 | GO:0036402: proteasome-activating ATPase activity | 1.05E-03 |
| 29 | GO:0003950: NAD+ ADP-ribosyltransferase activity | 1.25E-03 |
| 30 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.25E-03 |
| 31 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 2.18E-03 |
| 32 | GO:0051287: NAD binding | 2.41E-03 |
| 33 | GO:0016844: strictosidine synthase activity | 2.43E-03 |
| 34 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 2.98E-03 |
| 35 | GO:0008559: xenobiotic-transporting ATPase activity | 2.98E-03 |
| 36 | GO:0015386: potassium:proton antiporter activity | 2.98E-03 |
| 37 | GO:0017025: TBP-class protein binding | 4.18E-03 |
| 38 | GO:0001046: core promoter sequence-specific DNA binding | 4.83E-03 |
| 39 | GO:0043130: ubiquitin binding | 4.83E-03 |
| 40 | GO:0030170: pyridoxal phosphate binding | 5.25E-03 |
| 41 | GO:0010333: terpene synthase activity | 5.52E-03 |
| 42 | GO:0016887: ATPase activity | 5.61E-03 |
| 43 | GO:0000166: nucleotide binding | 6.66E-03 |
| 44 | GO:0005199: structural constituent of cell wall | 7.77E-03 |
| 45 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 8.29E-03 |
| 46 | GO:0004518: nuclease activity | 9.42E-03 |
| 47 | GO:0015385: sodium:proton antiporter activity | 9.85E-03 |
| 48 | GO:0004601: peroxidase activity | 1.01E-02 |
| 49 | GO:0008237: metallopeptidase activity | 1.07E-02 |
| 50 | GO:0016597: amino acid binding | 1.12E-02 |
| 51 | GO:0050660: flavin adenine dinucleotide binding | 1.17E-02 |
| 52 | GO:0008233: peptidase activity | 1.23E-02 |
| 53 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.31E-02 |
| 54 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.41E-02 |
| 55 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.56E-02 |
| 56 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.56E-02 |
| 57 | GO:0003746: translation elongation factor activity | 1.66E-02 |
| 58 | GO:0004364: glutathione transferase activity | 1.93E-02 |
| 59 | GO:0009055: electron carrier activity | 1.99E-02 |
| 60 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.10E-02 |
| 61 | GO:0035091: phosphatidylinositol binding | 2.10E-02 |
| 62 | GO:0016298: lipase activity | 2.52E-02 |
| 63 | GO:0003729: mRNA binding | 2.69E-02 |
| 64 | GO:0020037: heme binding | 2.89E-02 |
| 65 | GO:0008565: protein transporter activity | 4.22E-02 |
| 66 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.44E-02 |
| 67 | GO:0005507: copper ion binding | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 5.70E-07 |
| 2 | GO:0005839: proteasome core complex | 1.05E-05 |
| 3 | GO:0016442: RISC complex | 8.96E-05 |
| 4 | GO:0012510: trans-Golgi network transport vesicle membrane | 8.96E-05 |
| 5 | GO:0005829: cytosol | 1.30E-04 |
| 6 | GO:0009530: primary cell wall | 3.54E-04 |
| 7 | GO:0005775: vacuolar lumen | 5.10E-04 |
| 8 | GO:0005776: autophagosome | 6.78E-04 |
| 9 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 6.78E-04 |
| 10 | GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain | 8.59E-04 |
| 11 | GO:0000813: ESCRT I complex | 8.59E-04 |
| 12 | GO:0030127: COPII vesicle coat | 1.05E-03 |
| 13 | GO:0030904: retromer complex | 1.05E-03 |
| 14 | GO:0031597: cytosolic proteasome complex | 1.25E-03 |
| 15 | GO:0000325: plant-type vacuole | 1.42E-03 |
| 16 | GO:0031595: nuclear proteasome complex | 1.46E-03 |
| 17 | GO:0000421: autophagosome membrane | 1.69E-03 |
| 18 | GO:0031902: late endosome membrane | 1.84E-03 |
| 19 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.93E-03 |
| 20 | GO:0008180: COP9 signalosome | 2.18E-03 |
| 21 | GO:0010494: cytoplasmic stress granule | 2.18E-03 |
| 22 | GO:0008540: proteasome regulatory particle, base subcomplex | 2.43E-03 |
| 23 | GO:0008541: proteasome regulatory particle, lid subcomplex | 2.98E-03 |
| 24 | GO:0048471: perinuclear region of cytoplasm | 2.98E-03 |
| 25 | GO:0031410: cytoplasmic vesicle | 5.87E-03 |
| 26 | GO:0005774: vacuolar membrane | 7.20E-03 |
| 27 | GO:0005794: Golgi apparatus | 7.50E-03 |
| 28 | GO:0005618: cell wall | 9.10E-03 |
| 29 | GO:0032580: Golgi cisterna membrane | 1.03E-02 |
| 30 | GO:0000932: P-body | 1.17E-02 |
| 31 | GO:0009707: chloroplast outer membrane | 1.41E-02 |
| 32 | GO:0005773: vacuole | 1.51E-02 |
| 33 | GO:0009536: plastid | 2.11E-02 |
| 34 | GO:0005886: plasma membrane | 2.44E-02 |
| 35 | GO:0005635: nuclear envelope | 2.58E-02 |
| 36 | GO:0010008: endosome membrane | 2.84E-02 |
| 37 | GO:0005737: cytoplasm | 3.38E-02 |
| 38 | GO:0005623: cell | 3.78E-02 |