Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G76390

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000068: regulation of defense response to insect0.00E+00
2GO:0072722: response to amitrole0.00E+00
3GO:0052386: cell wall thickening0.00E+00
4GO:0043619: regulation of transcription from RNA polymerase II promoter in response to oxidative stress0.00E+00
5GO:0016102: diterpenoid biosynthetic process0.00E+00
6GO:0009759: indole glucosinolate biosynthetic process1.70E-05
7GO:0071669: plant-type cell wall organization or biogenesis3.32E-05
8GO:0051607: defense response to virus4.94E-05
9GO:0019567: arabinose biosynthetic process8.43E-05
10GO:0046246: terpene biosynthetic process8.43E-05
11GO:0051090: regulation of sequence-specific DNA binding transcription factor activity8.43E-05
12GO:0006680: glucosylceramide catabolic process8.43E-05
13GO:0009617: response to bacterium1.14E-04
14GO:0006568: tryptophan metabolic process2.00E-04
15GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine2.00E-04
16GO:0071497: cellular response to freezing2.00E-04
17GO:0009611: response to wounding2.03E-04
18GO:0000162: tryptophan biosynthetic process2.29E-04
19GO:0016998: cell wall macromolecule catabolic process3.11E-04
20GO:0032504: multicellular organism reproduction3.35E-04
21GO:0010476: gibberellin mediated signaling pathway3.35E-04
22GO:0010325: raffinose family oligosaccharide biosynthetic process3.35E-04
23GO:0010272: response to silver ion3.35E-04
24GO:0006556: S-adenosylmethionine biosynthetic process3.35E-04
25GO:0070301: cellular response to hydrogen peroxide4.84E-04
26GO:0009963: positive regulation of flavonoid biosynthetic process4.84E-04
27GO:0080024: indolebutyric acid metabolic process4.84E-04
28GO:0009939: positive regulation of gibberellic acid mediated signaling pathway6.44E-04
29GO:0048830: adventitious root development6.44E-04
30GO:0033356: UDP-L-arabinose metabolic process6.44E-04
31GO:0015867: ATP transport6.44E-04
32GO:1901002: positive regulation of response to salt stress6.44E-04
33GO:0010188: response to microbial phytotoxin6.44E-04
34GO:0019760: glucosinolate metabolic process7.52E-04
35GO:0010150: leaf senescence7.93E-04
36GO:0000304: response to singlet oxygen8.14E-04
37GO:0015866: ADP transport9.94E-04
38GO:0010256: endomembrane system organization9.94E-04
39GO:0048444: floral organ morphogenesis1.18E-03
40GO:0030643: cellular phosphate ion homeostasis1.18E-03
41GO:0009082: branched-chain amino acid biosynthetic process1.18E-03
42GO:0009099: valine biosynthetic process1.18E-03
43GO:0080113: regulation of seed growth1.18E-03
44GO:0080027: response to herbivore1.39E-03
45GO:0050829: defense response to Gram-negative bacterium1.39E-03
46GO:0006605: protein targeting1.60E-03
47GO:0042542: response to hydrogen peroxide1.77E-03
48GO:0010417: glucuronoxylan biosynthetic process1.83E-03
49GO:0009097: isoleucine biosynthetic process1.83E-03
50GO:0009056: catabolic process2.06E-03
51GO:0010112: regulation of systemic acquired resistance2.06E-03
52GO:0009098: leucine biosynthetic process2.30E-03
53GO:0009641: shade avoidance2.56E-03
54GO:0006032: chitin catabolic process2.56E-03
55GO:0009684: indoleacetic acid biosynthetic process2.82E-03
56GO:0009682: induced systemic resistance2.82E-03
57GO:0052544: defense response by callose deposition in cell wall2.82E-03
58GO:0006415: translational termination2.82E-03
59GO:0000272: polysaccharide catabolic process2.82E-03
60GO:0009751: response to salicylic acid2.85E-03
61GO:0071365: cellular response to auxin stimulus3.09E-03
62GO:0009753: response to jasmonic acid3.17E-03
63GO:0042742: defense response to bacterium3.29E-03
64GO:0006807: nitrogen compound metabolic process3.37E-03
65GO:0055114: oxidation-reduction process3.47E-03
66GO:0090351: seedling development3.95E-03
67GO:0051302: regulation of cell division4.89E-03
68GO:0006874: cellular calcium ion homeostasis4.89E-03
69GO:0009269: response to desiccation5.22E-03
70GO:0016114: terpenoid biosynthetic process5.22E-03
71GO:0030245: cellulose catabolic process5.55E-03
72GO:0006730: one-carbon metabolic process5.55E-03
73GO:0016226: iron-sulfur cluster assembly5.55E-03
74GO:0030433: ubiquitin-dependent ERAD pathway5.55E-03
75GO:0040008: regulation of growth5.74E-03
76GO:0009693: ethylene biosynthetic process5.89E-03
77GO:0046686: response to cadmium ion6.45E-03
78GO:0010051: xylem and phloem pattern formation6.97E-03
79GO:0045893: positive regulation of transcription, DNA-templated7.16E-03
80GO:0045489: pectin biosynthetic process7.34E-03
81GO:0006662: glycerol ether metabolic process7.34E-03
82GO:0048544: recognition of pollen7.72E-03
83GO:0006623: protein targeting to vacuole8.10E-03
84GO:0010193: response to ozone8.50E-03
85GO:0000302: response to reactive oxygen species8.50E-03
86GO:0006891: intra-Golgi vesicle-mediated transport8.50E-03
87GO:0006635: fatty acid beta-oxidation8.50E-03
88GO:0071281: cellular response to iron ion9.30E-03
89GO:0009737: response to abscisic acid1.04E-02
90GO:0009615: response to virus1.10E-02
91GO:0009816: defense response to bacterium, incompatible interaction1.14E-02
92GO:0009627: systemic acquired resistance1.19E-02
93GO:0044550: secondary metabolite biosynthetic process1.26E-02
94GO:0016311: dephosphorylation1.28E-02
95GO:0009817: defense response to fungus, incompatible interaction1.33E-02
96GO:0030244: cellulose biosynthetic process1.33E-02
97GO:0009832: plant-type cell wall biogenesis1.37E-02
98GO:0010043: response to zinc ion1.47E-02
99GO:0006869: lipid transport1.52E-02
100GO:0009867: jasmonic acid mediated signaling pathway1.57E-02
101GO:0016051: carbohydrate biosynthetic process1.57E-02
102GO:0006099: tricarboxylic acid cycle1.62E-02
103GO:0034599: cellular response to oxidative stress1.62E-02
104GO:0006839: mitochondrial transport1.72E-02
105GO:0006631: fatty acid metabolic process1.77E-02
106GO:0051707: response to other organism1.88E-02
107GO:0010114: response to red light1.88E-02
108GO:0008152: metabolic process1.89E-02
109GO:0009965: leaf morphogenesis2.04E-02
110GO:0009651: response to salt stress2.05E-02
111GO:0009809: lignin biosynthetic process2.32E-02
112GO:0009736: cytokinin-activated signaling pathway2.32E-02
113GO:0009620: response to fungus2.80E-02
114GO:0042545: cell wall modification2.92E-02
115GO:0009058: biosynthetic process3.64E-02
116GO:0006633: fatty acid biosynthetic process4.12E-02
117GO:0045490: pectin catabolic process4.40E-02
118GO:0009739: response to gibberellin4.77E-02
RankGO TermAdjusted P value
1GO:0097007: 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity0.00E+00
2GO:0080013: (E,E)-geranyllinalool synthase activity0.00E+00
3GO:0097008: (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity0.00E+00
4GO:0010179: IAA-Ala conjugate hydrolase activity8.43E-05
5GO:0004425: indole-3-glycerol-phosphate synthase activity8.43E-05
6GO:0004348: glucosylceramidase activity8.43E-05
7GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity8.43E-05
8GO:0010331: gibberellin binding2.00E-04
9GO:0052691: UDP-arabinopyranose mutase activity2.00E-04
10GO:0004478: methionine adenosyltransferase activity3.35E-04
11GO:0003955: NAD(P)H dehydrogenase (quinone) activity3.35E-04
12GO:0019825: oxygen binding3.80E-04
13GO:0052655: L-valine transaminase activity4.84E-04
14GO:0016149: translation release factor activity, codon specific4.84E-04
15GO:0010178: IAA-amino acid conjugate hydrolase activity4.84E-04
16GO:0016656: monodehydroascorbate reductase (NADH) activity4.84E-04
17GO:0052656: L-isoleucine transaminase activity4.84E-04
18GO:0052654: L-leucine transaminase activity4.84E-04
19GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor6.44E-04
20GO:0004084: branched-chain-amino-acid transaminase activity6.44E-04
21GO:0016866: intramolecular transferase activity6.44E-04
22GO:0005506: iron ion binding6.93E-04
23GO:0008237: metallopeptidase activity7.98E-04
24GO:0018685: alkane 1-monooxygenase activity8.14E-04
25GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity9.94E-04
26GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity9.94E-04
27GO:0015217: ADP transmembrane transporter activity1.18E-03
28GO:0102391: decanoate--CoA ligase activity1.18E-03
29GO:0005347: ATP transmembrane transporter activity1.18E-03
30GO:0004467: long-chain fatty acid-CoA ligase activity1.39E-03
31GO:0020037: heme binding1.57E-03
32GO:0052747: sinapyl alcohol dehydrogenase activity1.60E-03
33GO:0003747: translation release factor activity2.06E-03
34GO:0004568: chitinase activity2.56E-03
35GO:0045551: cinnamyl-alcohol dehydrogenase activity3.09E-03
36GO:0015035: protein disulfide oxidoreductase activity3.60E-03
37GO:0005217: intracellular ligand-gated ion channel activity3.95E-03
38GO:0008061: chitin binding3.95E-03
39GO:0004970: ionotropic glutamate receptor activity3.95E-03
40GO:0051536: iron-sulfur cluster binding4.57E-03
41GO:0010333: terpene synthase activity5.22E-03
42GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity5.55E-03
43GO:0008810: cellulase activity5.89E-03
44GO:0047134: protein-disulfide reductase activity6.60E-03
45GO:0004791: thioredoxin-disulfide reductase activity7.72E-03
46GO:0010181: FMN binding7.72E-03
47GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor9.30E-03
48GO:0016791: phosphatase activity9.72E-03
49GO:0043565: sequence-specific DNA binding1.23E-02
50GO:0004871: signal transducer activity1.45E-02
51GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.50E-02
52GO:0003993: acid phosphatase activity1.62E-02
53GO:0004712: protein serine/threonine/tyrosine kinase activity1.67E-02
54GO:0051539: 4 iron, 4 sulfur cluster binding1.72E-02
55GO:0005198: structural molecule activity2.04E-02
56GO:0008289: lipid binding2.38E-02
57GO:0031625: ubiquitin protein ligase binding2.50E-02
58GO:0045330: aspartyl esterase activity2.50E-02
59GO:0016887: ATPase activity2.65E-02
60GO:0030599: pectinesterase activity2.86E-02
61GO:0022857: transmembrane transporter activity2.86E-02
62GO:0000166: nucleotide binding3.04E-02
63GO:0016746: transferase activity, transferring acyl groups3.05E-02
64GO:0016758: transferase activity, transferring hexosyl groups3.44E-02
65GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.57E-02
66GO:0030170: pyridoxal phosphate binding3.77E-02
67GO:0046910: pectinesterase inhibitor activity4.19E-02
68GO:0015297: antiporter activity4.26E-02
69GO:0005524: ATP binding4.70E-02
RankGO TermAdjusted P value
1GO:0045252: oxoglutarate dehydrogenase complex8.43E-05
2GO:0017119: Golgi transport complex1.00E-04
3GO:0005783: endoplasmic reticulum1.79E-04
4GO:0005886: plasma membrane2.58E-04
5GO:0005794: Golgi apparatus2.62E-04
6GO:0030658: transport vesicle membrane4.84E-04
7GO:0016021: integral component of membrane5.07E-04
8GO:0005788: endoplasmic reticulum lumen9.39E-04
9GO:0009986: cell surface1.39E-03
10GO:0005789: endoplasmic reticulum membrane1.49E-03
11GO:0005779: integral component of peroxisomal membrane1.83E-03
12GO:0016020: membrane6.67E-03
13GO:0046658: anchored component of plasma membrane7.96E-03
14GO:0031965: nuclear membrane8.10E-03
15GO:0071944: cell periphery9.30E-03
16GO:0009707: chloroplast outer membrane1.33E-02
17GO:0009505: plant-type cell wall1.96E-02
18GO:0005829: cytosol1.97E-02
19GO:0009506: plasmodesma2.34E-02
20GO:0005618: cell wall2.62E-02
21GO:0005777: peroxisome3.48E-02
22GO:0005623: cell3.57E-02
23GO:0009705: plant-type vacuole membrane4.40E-02
24GO:0031225: anchored component of membrane4.71E-02
25GO:0005802: trans-Golgi network4.84E-02
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Gene type



Gene DE type