GO Enrichment Analysis of Co-expressed Genes with
AT1G75690
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 2 | GO:0015979: photosynthesis | 1.76E-17 |
| 3 | GO:0010196: nonphotochemical quenching | 5.62E-08 |
| 4 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.38E-07 |
| 5 | GO:0015995: chlorophyll biosynthetic process | 3.92E-07 |
| 6 | GO:0090391: granum assembly | 5.35E-07 |
| 7 | GO:0006000: fructose metabolic process | 5.35E-07 |
| 8 | GO:0010114: response to red light | 1.50E-06 |
| 9 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.10E-06 |
| 10 | GO:0006002: fructose 6-phosphate metabolic process | 2.26E-05 |
| 11 | GO:0018298: protein-chromophore linkage | 2.52E-05 |
| 12 | GO:0010218: response to far red light | 2.95E-05 |
| 13 | GO:0009735: response to cytokinin | 3.10E-05 |
| 14 | GO:0010205: photoinhibition | 3.50E-05 |
| 15 | GO:0009637: response to blue light | 3.67E-05 |
| 16 | GO:0071588: hydrogen peroxide mediated signaling pathway | 4.74E-05 |
| 17 | GO:0009773: photosynthetic electron transport in photosystem I | 5.03E-05 |
| 18 | GO:0006094: gluconeogenesis | 6.88E-05 |
| 19 | GO:0005986: sucrose biosynthetic process | 6.88E-05 |
| 20 | GO:0055114: oxidation-reduction process | 1.01E-04 |
| 21 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.02E-04 |
| 22 | GO:0006518: peptide metabolic process | 2.00E-04 |
| 23 | GO:0006633: fatty acid biosynthetic process | 2.67E-04 |
| 24 | GO:2000122: negative regulation of stomatal complex development | 3.94E-04 |
| 25 | GO:0010037: response to carbon dioxide | 3.94E-04 |
| 26 | GO:0015976: carbon utilization | 3.94E-04 |
| 27 | GO:0010027: thylakoid membrane organization | 4.32E-04 |
| 28 | GO:0016123: xanthophyll biosynthetic process | 5.00E-04 |
| 29 | GO:0016311: dephosphorylation | 5.32E-04 |
| 30 | GO:0009817: defense response to fungus, incompatible interaction | 5.59E-04 |
| 31 | GO:0009631: cold acclimation | 6.43E-04 |
| 32 | GO:0010019: chloroplast-nucleus signaling pathway | 7.31E-04 |
| 33 | GO:0009772: photosynthetic electron transport in photosystem II | 8.54E-04 |
| 34 | GO:0030091: protein repair | 9.81E-04 |
| 35 | GO:0010206: photosystem II repair | 1.25E-03 |
| 36 | GO:0006754: ATP biosynthetic process | 1.25E-03 |
| 37 | GO:0009245: lipid A biosynthetic process | 1.25E-03 |
| 38 | GO:0009688: abscisic acid biosynthetic process | 1.55E-03 |
| 39 | GO:0072593: reactive oxygen species metabolic process | 1.70E-03 |
| 40 | GO:0009750: response to fructose | 1.70E-03 |
| 41 | GO:0005983: starch catabolic process | 1.86E-03 |
| 42 | GO:0010207: photosystem II assembly | 2.20E-03 |
| 43 | GO:0009266: response to temperature stimulus | 2.20E-03 |
| 44 | GO:0019253: reductive pentose-phosphate cycle | 2.20E-03 |
| 45 | GO:0005985: sucrose metabolic process | 2.38E-03 |
| 46 | GO:0007017: microtubule-based process | 2.93E-03 |
| 47 | GO:0061077: chaperone-mediated protein folding | 3.12E-03 |
| 48 | GO:0070417: cellular response to cold | 3.93E-03 |
| 49 | GO:0042335: cuticle development | 4.15E-03 |
| 50 | GO:0010182: sugar mediated signaling pathway | 4.37E-03 |
| 51 | GO:0009658: chloroplast organization | 4.38E-03 |
| 52 | GO:0015986: ATP synthesis coupled proton transport | 4.59E-03 |
| 53 | GO:0055072: iron ion homeostasis | 4.81E-03 |
| 54 | GO:0000302: response to reactive oxygen species | 5.04E-03 |
| 55 | GO:0009627: systemic acquired resistance | 7.01E-03 |
| 56 | GO:0009409: response to cold | 8.22E-03 |
| 57 | GO:0010119: regulation of stomatal movement | 8.65E-03 |
| 58 | GO:0006810: transport | 9.12E-03 |
| 59 | GO:0034599: cellular response to oxidative stress | 9.51E-03 |
| 60 | GO:0042744: hydrogen peroxide catabolic process | 2.24E-02 |
| 61 | GO:0010150: leaf senescence | 2.57E-02 |
| 62 | GO:0009414: response to water deprivation | 2.82E-02 |
| 63 | GO:0042742: defense response to bacterium | 2.89E-02 |
| 64 | GO:0006979: response to oxidative stress | 2.91E-02 |
| 65 | GO:0006970: response to osmotic stress | 3.70E-02 |
| 66 | GO:0009723: response to ethylene | 3.90E-02 |
| 67 | GO:0080167: response to karrikin | 4.09E-02 |
| 68 | GO:0044550: secondary metabolite biosynthetic process | 4.35E-02 |
| 69 | GO:0045454: cell redox homeostasis | 4.65E-02 |
| 70 | GO:0006869: lipid transport | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 2 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 3 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 4 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.38E-07 |
| 5 | GO:0031409: pigment binding | 1.45E-06 |
| 6 | GO:0016168: chlorophyll binding | 1.78E-05 |
| 7 | GO:0045485: omega-6 fatty acid desaturase activity | 4.74E-05 |
| 8 | GO:0018708: thiol S-methyltransferase activity | 1.17E-04 |
| 9 | GO:0016630: protochlorophyllide reductase activity | 1.17E-04 |
| 10 | GO:0042389: omega-3 fatty acid desaturase activity | 1.17E-04 |
| 11 | GO:0004324: ferredoxin-NADP+ reductase activity | 2.00E-04 |
| 12 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 2.00E-04 |
| 13 | GO:0016491: oxidoreductase activity | 2.91E-04 |
| 14 | GO:0016851: magnesium chelatase activity | 2.94E-04 |
| 15 | GO:0003959: NADPH dehydrogenase activity | 5.00E-04 |
| 16 | GO:0031177: phosphopantetheine binding | 6.13E-04 |
| 17 | GO:0016688: L-ascorbate peroxidase activity | 6.13E-04 |
| 18 | GO:0008200: ion channel inhibitor activity | 6.13E-04 |
| 19 | GO:0004130: cytochrome-c peroxidase activity | 6.13E-04 |
| 20 | GO:0000035: acyl binding | 7.31E-04 |
| 21 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 7.31E-04 |
| 22 | GO:0051537: 2 iron, 2 sulfur cluster binding | 9.62E-04 |
| 23 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 9.81E-04 |
| 24 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.11E-03 |
| 25 | GO:0071949: FAD binding | 1.25E-03 |
| 26 | GO:0030234: enzyme regulator activity | 1.55E-03 |
| 27 | GO:0044183: protein binding involved in protein folding | 1.70E-03 |
| 28 | GO:0015386: potassium:proton antiporter activity | 1.70E-03 |
| 29 | GO:0046872: metal ion binding | 1.81E-03 |
| 30 | GO:0004089: carbonate dehydratase activity | 2.03E-03 |
| 31 | GO:0008266: poly(U) RNA binding | 2.20E-03 |
| 32 | GO:0005528: FK506 binding | 2.74E-03 |
| 33 | GO:0015079: potassium ion transmembrane transporter activity | 2.93E-03 |
| 34 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 4.37E-03 |
| 35 | GO:0048038: quinone binding | 5.04E-03 |
| 36 | GO:0005200: structural constituent of cytoskeleton | 6.00E-03 |
| 37 | GO:0004222: metalloendopeptidase activity | 8.37E-03 |
| 38 | GO:0030145: manganese ion binding | 8.65E-03 |
| 39 | GO:0003993: acid phosphatase activity | 9.51E-03 |
| 40 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.23E-02 |
| 41 | GO:0016787: hydrolase activity | 1.47E-02 |
| 42 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.09E-02 |
| 43 | GO:0008168: methyltransferase activity | 3.42E-02 |
| 44 | GO:0016788: hydrolase activity, acting on ester bonds | 3.56E-02 |
| 45 | GO:0052689: carboxylic ester hydrolase activity | 4.40E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 5.37E-32 |
| 3 | GO:0009534: chloroplast thylakoid | 5.79E-31 |
| 4 | GO:0009507: chloroplast | 4.75E-26 |
| 5 | GO:0009579: thylakoid | 7.11E-20 |
| 6 | GO:0009941: chloroplast envelope | 2.05E-17 |
| 7 | GO:0010287: plastoglobule | 4.97E-09 |
| 8 | GO:0009706: chloroplast inner membrane | 6.21E-06 |
| 9 | GO:0009522: photosystem I | 6.83E-06 |
| 10 | GO:0009523: photosystem II | 7.73E-06 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 9.99E-06 |
| 12 | GO:0009533: chloroplast stromal thylakoid | 1.32E-05 |
| 13 | GO:0009538: photosystem I reaction center | 1.76E-05 |
| 14 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.84E-05 |
| 15 | GO:0009783: photosystem II antenna complex | 4.74E-05 |
| 16 | GO:0031977: thylakoid lumen | 4.82E-05 |
| 17 | GO:0009570: chloroplast stroma | 6.56E-05 |
| 18 | GO:0031969: chloroplast membrane | 6.81E-05 |
| 19 | GO:0030076: light-harvesting complex | 9.03E-05 |
| 20 | GO:0031357: integral component of chloroplast inner membrane | 1.17E-04 |
| 21 | GO:0042651: thylakoid membrane | 1.28E-04 |
| 22 | GO:0010007: magnesium chelatase complex | 2.00E-04 |
| 23 | GO:0010319: stromule | 3.85E-04 |
| 24 | GO:0009544: chloroplast ATP synthase complex | 3.94E-04 |
| 25 | GO:0009517: PSII associated light-harvesting complex II | 3.94E-04 |
| 26 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 6.13E-04 |
| 27 | GO:0016020: membrane | 6.33E-04 |
| 28 | GO:0045298: tubulin complex | 1.25E-03 |
| 29 | GO:0016021: integral component of membrane | 1.38E-03 |
| 30 | GO:0030095: chloroplast photosystem II | 2.20E-03 |
| 31 | GO:0009707: chloroplast outer membrane | 7.81E-03 |
| 32 | GO:0048046: apoplast | 2.87E-02 |