GO Enrichment Analysis of Co-expressed Genes with
AT1G75400
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010499: proteasomal ubiquitin-independent protein catabolic process | 0.00E+00 |
| 2 | GO:0080149: sucrose induced translational repression | 0.00E+00 |
| 3 | GO:0048827: phyllome development | 2.72E-05 |
| 4 | GO:1900424: regulation of defense response to bacterium | 1.12E-04 |
| 5 | GO:0035266: meristem growth | 1.12E-04 |
| 6 | GO:0007292: female gamete generation | 1.12E-04 |
| 7 | GO:0010421: hydrogen peroxide-mediated programmed cell death | 1.12E-04 |
| 8 | GO:0035335: peptidyl-tyrosine dephosphorylation | 2.61E-04 |
| 9 | GO:0009805: coumarin biosynthetic process | 2.61E-04 |
| 10 | GO:0031124: mRNA 3'-end processing | 2.61E-04 |
| 11 | GO:0042853: L-alanine catabolic process | 2.61E-04 |
| 12 | GO:0002215: defense response to nematode | 2.61E-04 |
| 13 | GO:0051788: response to misfolded protein | 2.61E-04 |
| 14 | GO:0080026: response to indolebutyric acid | 2.61E-04 |
| 15 | GO:0050688: regulation of defense response to virus | 2.61E-04 |
| 16 | GO:0009225: nucleotide-sugar metabolic process | 3.01E-04 |
| 17 | GO:0060968: regulation of gene silencing | 4.32E-04 |
| 18 | GO:0009062: fatty acid catabolic process | 4.32E-04 |
| 19 | GO:0010253: UDP-rhamnose biosynthetic process | 4.32E-04 |
| 20 | GO:0016192: vesicle-mediated transport | 5.11E-04 |
| 21 | GO:0080024: indolebutyric acid metabolic process | 6.19E-04 |
| 22 | GO:0070676: intralumenal vesicle formation | 6.19E-04 |
| 23 | GO:0072334: UDP-galactose transmembrane transport | 6.19E-04 |
| 24 | GO:0048577: negative regulation of short-day photoperiodism, flowering | 6.19E-04 |
| 25 | GO:0071786: endoplasmic reticulum tubular network organization | 6.19E-04 |
| 26 | GO:0033320: UDP-D-xylose biosynthetic process | 8.23E-04 |
| 27 | GO:0030163: protein catabolic process | 1.02E-03 |
| 28 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.27E-03 |
| 29 | GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation | 1.27E-03 |
| 30 | GO:0048232: male gamete generation | 1.27E-03 |
| 31 | GO:0006555: methionine metabolic process | 1.27E-03 |
| 32 | GO:0043248: proteasome assembly | 1.27E-03 |
| 33 | GO:0042732: D-xylose metabolic process | 1.27E-03 |
| 34 | GO:0042176: regulation of protein catabolic process | 1.27E-03 |
| 35 | GO:0010315: auxin efflux | 1.27E-03 |
| 36 | GO:0045040: protein import into mitochondrial outer membrane | 1.27E-03 |
| 37 | GO:0047484: regulation of response to osmotic stress | 1.27E-03 |
| 38 | GO:0019509: L-methionine salvage from methylthioadenosine | 1.52E-03 |
| 39 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.52E-03 |
| 40 | GO:0009612: response to mechanical stimulus | 1.52E-03 |
| 41 | GO:0017148: negative regulation of translation | 1.52E-03 |
| 42 | GO:0006744: ubiquinone biosynthetic process | 1.78E-03 |
| 43 | GO:0006491: N-glycan processing | 2.06E-03 |
| 44 | GO:0010078: maintenance of root meristem identity | 2.06E-03 |
| 45 | GO:0009699: phenylpropanoid biosynthetic process | 2.35E-03 |
| 46 | GO:0006002: fructose 6-phosphate metabolic process | 2.35E-03 |
| 47 | GO:0006379: mRNA cleavage | 2.66E-03 |
| 48 | GO:0015780: nucleotide-sugar transport | 2.66E-03 |
| 49 | GO:0048829: root cap development | 3.30E-03 |
| 50 | GO:0051555: flavonol biosynthetic process | 3.30E-03 |
| 51 | GO:0006486: protein glycosylation | 3.59E-03 |
| 52 | GO:0006378: mRNA polyadenylation | 3.65E-03 |
| 53 | GO:0010015: root morphogenesis | 3.65E-03 |
| 54 | GO:0072593: reactive oxygen species metabolic process | 3.65E-03 |
| 55 | GO:0043085: positive regulation of catalytic activity | 3.65E-03 |
| 56 | GO:0055046: microgametogenesis | 4.36E-03 |
| 57 | GO:0006626: protein targeting to mitochondrion | 4.36E-03 |
| 58 | GO:0009933: meristem structural organization | 4.74E-03 |
| 59 | GO:0007034: vacuolar transport | 4.74E-03 |
| 60 | GO:0090351: seedling development | 5.13E-03 |
| 61 | GO:0007033: vacuole organization | 5.13E-03 |
| 62 | GO:0010053: root epidermal cell differentiation | 5.13E-03 |
| 63 | GO:0007031: peroxisome organization | 5.13E-03 |
| 64 | GO:0034976: response to endoplasmic reticulum stress | 5.52E-03 |
| 65 | GO:0000027: ribosomal large subunit assembly | 5.93E-03 |
| 66 | GO:0006338: chromatin remodeling | 5.93E-03 |
| 67 | GO:0008299: isoprenoid biosynthetic process | 6.35E-03 |
| 68 | GO:0019748: secondary metabolic process | 7.22E-03 |
| 69 | GO:0030433: ubiquitin-dependent ERAD pathway | 7.22E-03 |
| 70 | GO:0042127: regulation of cell proliferation | 8.13E-03 |
| 71 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 8.60E-03 |
| 72 | GO:0034220: ion transmembrane transport | 9.08E-03 |
| 73 | GO:0009555: pollen development | 9.76E-03 |
| 74 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 9.85E-03 |
| 75 | GO:0006470: protein dephosphorylation | 1.01E-02 |
| 76 | GO:0006623: protein targeting to vacuole | 1.06E-02 |
| 77 | GO:0006810: transport | 1.06E-02 |
| 78 | GO:0006635: fatty acid beta-oxidation | 1.11E-02 |
| 79 | GO:0000302: response to reactive oxygen species | 1.11E-02 |
| 80 | GO:0046686: response to cadmium ion | 1.15E-02 |
| 81 | GO:0001666: response to hypoxia | 1.44E-02 |
| 82 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.44E-02 |
| 83 | GO:0009627: systemic acquired resistance | 1.56E-02 |
| 84 | GO:0006906: vesicle fusion | 1.56E-02 |
| 85 | GO:0009817: defense response to fungus, incompatible interaction | 1.74E-02 |
| 86 | GO:0048767: root hair elongation | 1.80E-02 |
| 87 | GO:0010311: lateral root formation | 1.80E-02 |
| 88 | GO:0006499: N-terminal protein myristoylation | 1.86E-02 |
| 89 | GO:0009910: negative regulation of flower development | 1.93E-02 |
| 90 | GO:0045454: cell redox homeostasis | 2.03E-02 |
| 91 | GO:0045087: innate immune response | 2.06E-02 |
| 92 | GO:0034599: cellular response to oxidative stress | 2.12E-02 |
| 93 | GO:0006887: exocytosis | 2.32E-02 |
| 94 | GO:0009926: auxin polar transport | 2.46E-02 |
| 95 | GO:0009744: response to sucrose | 2.46E-02 |
| 96 | GO:0009408: response to heat | 2.51E-02 |
| 97 | GO:0008643: carbohydrate transport | 2.60E-02 |
| 98 | GO:0048364: root development | 2.61E-02 |
| 99 | GO:0009965: leaf morphogenesis | 2.67E-02 |
| 100 | GO:0000165: MAPK cascade | 2.82E-02 |
| 101 | GO:0009846: pollen germination | 2.89E-02 |
| 102 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.12E-02 |
| 103 | GO:0006508: proteolysis | 3.17E-02 |
| 104 | GO:0015031: protein transport | 3.21E-02 |
| 105 | GO:0006096: glycolytic process | 3.43E-02 |
| 106 | GO:0048367: shoot system development | 3.51E-02 |
| 107 | GO:0016569: covalent chromatin modification | 3.75E-02 |
| 108 | GO:0009553: embryo sac development | 3.83E-02 |
| 109 | GO:0009908: flower development | 4.01E-02 |
| 110 | GO:0009058: biosynthetic process | 4.76E-02 |
| 111 | GO:0055114: oxidation-reduction process | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016504: peptidase activator activity | 0.00E+00 |
| 2 | GO:0070577: lysine-acetylated histone binding | 0.00E+00 |
| 3 | GO:0019211: phosphatase activator activity | 0.00E+00 |
| 4 | GO:0004190: aspartic-type endopeptidase activity | 8.57E-06 |
| 5 | GO:0003746: translation elongation factor activity | 1.97E-04 |
| 6 | GO:0010297: heteropolysaccharide binding | 2.61E-04 |
| 7 | GO:0008460: dTDP-glucose 4,6-dehydratase activity | 2.61E-04 |
| 8 | GO:0010280: UDP-L-rhamnose synthase activity | 2.61E-04 |
| 9 | GO:0050347: trans-octaprenyltranstransferase activity | 2.61E-04 |
| 10 | GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity | 2.61E-04 |
| 11 | GO:0008805: carbon-monoxide oxygenase activity | 2.61E-04 |
| 12 | GO:0051731: polynucleotide 5'-hydroxyl-kinase activity | 2.61E-04 |
| 13 | GO:0050377: UDP-glucose 4,6-dehydratase activity | 2.61E-04 |
| 14 | GO:0004725: protein tyrosine phosphatase activity | 3.37E-04 |
| 15 | GO:0000030: mannosyltransferase activity | 4.32E-04 |
| 16 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 4.32E-04 |
| 17 | GO:0022857: transmembrane transporter activity | 5.98E-04 |
| 18 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 6.19E-04 |
| 19 | GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | 6.19E-04 |
| 20 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 6.19E-04 |
| 21 | GO:0004659: prenyltransferase activity | 8.23E-04 |
| 22 | GO:0070628: proteasome binding | 8.23E-04 |
| 23 | GO:0005459: UDP-galactose transmembrane transporter activity | 1.04E-03 |
| 24 | GO:0004040: amidase activity | 1.04E-03 |
| 25 | GO:0048040: UDP-glucuronate decarboxylase activity | 1.27E-03 |
| 26 | GO:0004130: cytochrome-c peroxidase activity | 1.27E-03 |
| 27 | GO:0031593: polyubiquitin binding | 1.27E-03 |
| 28 | GO:0016688: L-ascorbate peroxidase activity | 1.27E-03 |
| 29 | GO:0036402: proteasome-activating ATPase activity | 1.27E-03 |
| 30 | GO:0004559: alpha-mannosidase activity | 1.52E-03 |
| 31 | GO:0070403: NAD+ binding | 1.52E-03 |
| 32 | GO:0016887: ATPase activity | 1.64E-03 |
| 33 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 1.78E-03 |
| 34 | GO:0003872: 6-phosphofructokinase activity | 1.78E-03 |
| 35 | GO:0030234: enzyme regulator activity | 3.30E-03 |
| 36 | GO:0004161: dimethylallyltranstransferase activity | 3.65E-03 |
| 37 | GO:0004722: protein serine/threonine phosphatase activity | 4.06E-03 |
| 38 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 4.74E-03 |
| 39 | GO:0004867: serine-type endopeptidase inhibitor activity | 5.13E-03 |
| 40 | GO:0017025: TBP-class protein binding | 5.13E-03 |
| 41 | GO:0043130: ubiquitin binding | 5.93E-03 |
| 42 | GO:0004298: threonine-type endopeptidase activity | 6.78E-03 |
| 43 | GO:0003756: protein disulfide isomerase activity | 8.13E-03 |
| 44 | GO:0004402: histone acetyltransferase activity | 9.08E-03 |
| 45 | GO:0016853: isomerase activity | 1.01E-02 |
| 46 | GO:0015250: water channel activity | 1.44E-02 |
| 47 | GO:0051213: dioxygenase activity | 1.44E-02 |
| 48 | GO:0004721: phosphoprotein phosphatase activity | 1.62E-02 |
| 49 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.74E-02 |
| 50 | GO:0061630: ubiquitin protein ligase activity | 1.78E-02 |
| 51 | GO:0050897: cobalt ion binding | 1.93E-02 |
| 52 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.06E-02 |
| 53 | GO:0000149: SNARE binding | 2.19E-02 |
| 54 | GO:0005484: SNAP receptor activity | 2.46E-02 |
| 55 | GO:0003824: catalytic activity | 2.68E-02 |
| 56 | GO:0009055: electron carrier activity | 2.69E-02 |
| 57 | GO:0031625: ubiquitin protein ligase binding | 3.27E-02 |
| 58 | GO:0005524: ATP binding | 3.44E-02 |
| 59 | GO:0015035: protein disulfide oxidoreductase activity | 3.99E-02 |
| 60 | GO:0030170: pyridoxal phosphate binding | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019867: outer membrane | 0.00E+00 |
| 2 | GO:0005783: endoplasmic reticulum | 6.61E-06 |
| 3 | GO:0000502: proteasome complex | 3.10E-05 |
| 4 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 6.75E-05 |
| 5 | GO:0005839: proteasome core complex | 4.53E-04 |
| 6 | GO:0005849: mRNA cleavage factor complex | 6.19E-04 |
| 7 | GO:0071782: endoplasmic reticulum tubular network | 6.19E-04 |
| 8 | GO:0030660: Golgi-associated vesicle membrane | 8.23E-04 |
| 9 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 8.23E-04 |
| 10 | GO:0016592: mediator complex | 9.56E-04 |
| 11 | GO:0005945: 6-phosphofructokinase complex | 1.04E-03 |
| 12 | GO:0005788: endoplasmic reticulum lumen | 1.35E-03 |
| 13 | GO:0031597: cytosolic proteasome complex | 1.52E-03 |
| 14 | GO:0000815: ESCRT III complex | 1.52E-03 |
| 15 | GO:0031595: nuclear proteasome complex | 1.78E-03 |
| 16 | GO:0031982: vesicle | 2.06E-03 |
| 17 | GO:0005742: mitochondrial outer membrane translocase complex | 2.35E-03 |
| 18 | GO:0031901: early endosome membrane | 2.66E-03 |
| 19 | GO:0008540: proteasome regulatory particle, base subcomplex | 2.97E-03 |
| 20 | GO:0005765: lysosomal membrane | 3.65E-03 |
| 21 | GO:0008541: proteasome regulatory particle, lid subcomplex | 3.65E-03 |
| 22 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 8.13E-03 |
| 23 | GO:0005615: extracellular space | 9.85E-03 |
| 24 | GO:0005789: endoplasmic reticulum membrane | 1.12E-02 |
| 25 | GO:0005829: cytosol | 1.27E-02 |
| 26 | GO:0032580: Golgi cisterna membrane | 1.27E-02 |
| 27 | GO:0005778: peroxisomal membrane | 1.33E-02 |
| 28 | GO:0016021: integral component of membrane | 1.46E-02 |
| 29 | GO:0005794: Golgi apparatus | 1.53E-02 |
| 30 | GO:0005768: endosome | 2.09E-02 |
| 31 | GO:0031201: SNARE complex | 2.32E-02 |
| 32 | GO:0010008: endosome membrane | 3.51E-02 |
| 33 | GO:0005774: vacuolar membrane | 3.77E-02 |
| 34 | GO:0016020: membrane | 4.13E-02 |