co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G75240

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0007638: mechanosensory behavior	0.00E+00
2	GO:0006907: pinocytosis	0.00E+00
3	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.58E-06
4	GO:0048497: maintenance of floral organ identity	3.97E-05
5	GO:0006438: valyl-tRNA aminoacylation	1.80E-04
6	GO:0010480: microsporocyte differentiation	1.80E-04
7	GO:0006426: glycyl-tRNA aminoacylation	1.80E-04
8	GO:0048829: root cap development	3.00E-04
9	GO:2000123: positive regulation of stomatal complex development	4.05E-04
10	GO:0009786: regulation of asymmetric cell division	4.05E-04
11	GO:0006351: transcription, DNA-templated	6.39E-04
12	GO:0009734: auxin-activated signaling pathway	8.66E-04
13	GO:0010371: regulation of gibberellin biosynthetic process	9.45E-04
14	GO:0007231: osmosensory signaling pathway	9.45E-04
15	GO:0007276: gamete generation	9.45E-04
16	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	9.45E-04
17	GO:0010088: phloem development	9.45E-04
18	GO:0042127: regulation of cell proliferation	1.09E-03
19	GO:0009765: photosynthesis, light harvesting	1.25E-03
20	GO:0033500: carbohydrate homeostasis	1.25E-03
21	GO:2000038: regulation of stomatal complex development	1.25E-03
22	GO:0006468: protein phosphorylation	1.52E-03
23	GO:0007094: mitotic spindle assembly checkpoint	1.59E-03
24	GO:0016123: xanthophyll biosynthetic process	1.59E-03
25	GO:0010375: stomatal complex patterning	1.59E-03
26	GO:0016120: carotene biosynthetic process	1.59E-03
27	GO:0071554: cell wall organization or biogenesis	1.68E-03
28	GO:0006355: regulation of transcription, DNA-templated	1.78E-03
29	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.96E-03
30	GO:0009913: epidermal cell differentiation	1.96E-03
31	GO:1902456: regulation of stomatal opening	1.96E-03
32	GO:0010405: arabinogalactan protein metabolic process	1.96E-03
33	GO:0030488: tRNA methylation	2.35E-03
34	GO:0045995: regulation of embryonic development	2.77E-03
35	GO:0048437: floral organ development	2.77E-03
36	GO:0000082: G1/S transition of mitotic cell cycle	2.77E-03
37	GO:0010444: guard mother cell differentiation	2.77E-03
38	GO:0030307: positive regulation of cell growth	2.77E-03
39	GO:0046620: regulation of organ growth	3.21E-03
40	GO:0010492: maintenance of shoot apical meristem identity	3.21E-03
41	GO:0006526: arginine biosynthetic process	3.67E-03
42	GO:0006865: amino acid transport	3.80E-03
43	GO:0030001: metal ion transport	4.53E-03
44	GO:0009638: phototropism	4.65E-03
45	GO:0006779: porphyrin-containing compound biosynthetic process	4.65E-03
46	GO:0009098: leucine biosynthetic process	4.65E-03
47	GO:0007346: regulation of mitotic cell cycle	4.65E-03
48	GO:0009641: shade avoidance	5.18E-03
49	GO:0006949: syncytium formation	5.18E-03
50	GO:0006782: protoporphyrinogen IX biosynthetic process	5.18E-03
51	GO:0009733: response to auxin	5.46E-03
52	GO:0006816: calcium ion transport	5.72E-03
53	GO:0048229: gametophyte development	5.72E-03
54	GO:0009793: embryo development ending in seed dormancy	6.22E-03
55	GO:0012501: programmed cell death	6.28E-03
56	GO:0010075: regulation of meristem growth	6.86E-03
57	GO:0010588: cotyledon vascular tissue pattern formation	6.86E-03
58	GO:2000012: regulation of auxin polar transport	6.86E-03
59	GO:0010102: lateral root morphogenesis	6.86E-03
60	GO:0009785: blue light signaling pathway	6.86E-03
61	GO:0010628: positive regulation of gene expression	6.86E-03
62	GO:0009887: animal organ morphogenesis	7.46E-03
63	GO:0009934: regulation of meristem structural organization	7.46E-03
64	GO:0010020: chloroplast fission	7.46E-03
65	GO:0009909: regulation of flower development	7.64E-03
66	GO:0070588: calcium ion transmembrane transport	8.08E-03
67	GO:0006825: copper ion transport	1.00E-02
68	GO:0019953: sexual reproduction	1.00E-02
69	GO:0006418: tRNA aminoacylation for protein translation	1.00E-02
70	GO:0016042: lipid catabolic process	1.05E-02
71	GO:0048511: rhythmic process	1.07E-02
72	GO:0010431: seed maturation	1.07E-02
73	GO:0003333: amino acid transmembrane transport	1.07E-02
74	GO:0010082: regulation of root meristem growth	1.22E-02
75	GO:0010091: trichome branching	1.29E-02
76	GO:0009058: biosynthetic process	1.30E-02
77	GO:0016117: carotenoid biosynthetic process	1.37E-02
78	GO:0010118: stomatal movement	1.44E-02
79	GO:0048653: anther development	1.44E-02
80	GO:0009741: response to brassinosteroid	1.52E-02
81	GO:0009958: positive gravitropism	1.52E-02
82	GO:0006520: cellular amino acid metabolic process	1.52E-02
83	GO:0042752: regulation of circadian rhythm	1.60E-02
84	GO:0007018: microtubule-based movement	1.60E-02
85	GO:0040008: regulation of growth	1.63E-02
86	GO:0048825: cotyledon development	1.68E-02
87	GO:0030154: cell differentiation	1.82E-02
88	GO:0032502: developmental process	1.85E-02
89	GO:0010583: response to cyclopentenone	1.85E-02
90	GO:1901657: glycosyl compound metabolic process	1.94E-02
91	GO:0030163: protein catabolic process	1.94E-02
92	GO:0009735: response to cytokinin	2.01E-02
93	GO:0009567: double fertilization forming a zygote and endosperm	2.03E-02
94	GO:0019760: glucosinolate metabolic process	2.03E-02
95	GO:0009828: plant-type cell wall loosening	2.03E-02
96	GO:0007267: cell-cell signaling	2.11E-02
97	GO:0051607: defense response to virus	2.20E-02
98	GO:0000910: cytokinesis	2.20E-02
99	GO:0009416: response to light stimulus	2.25E-02
100	GO:0016126: sterol biosynthetic process	2.30E-02
101	GO:0051301: cell division	2.51E-02
102	GO:0015995: chlorophyll biosynthetic process	2.58E-02
103	GO:0048573: photoperiodism, flowering	2.58E-02
104	GO:0016311: dephosphorylation	2.68E-02
105	GO:0000160: phosphorelay signal transduction system	2.87E-02
106	GO:0010311: lateral root formation	2.87E-02
107	GO:0009744: response to sucrose	3.93E-02
108	GO:0009926: auxin polar transport	3.93E-02
109	GO:0045892: negative regulation of transcription, DNA-templated	3.97E-02
110	GO:0009664: plant-type cell wall organization	4.62E-02
111	GO:0009736: cytokinin-activated signaling pathway	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
2	GO:0071633: dihydroceramidase activity	0.00E+00
3	GO:0047661: amino-acid racemase activity	0.00E+00
4	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
5	GO:0001872: (1->3)-beta-D-glucan binding	1.33E-05
6	GO:0004674: protein serine/threonine kinase activity	1.27E-04
7	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	1.80E-04
8	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	1.80E-04
9	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	1.80E-04
10	GO:0004832: valine-tRNA ligase activity	1.80E-04
11	GO:0004820: glycine-tRNA ligase activity	1.80E-04
12	GO:0003852: 2-isopropylmalate synthase activity	4.05E-04
13	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	6.61E-04
14	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	1.25E-03
15	GO:0019199: transmembrane receptor protein kinase activity	1.25E-03
16	GO:0001085: RNA polymerase II transcription factor binding	1.37E-03
17	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.96E-03
18	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.27E-03
19	GO:0016413: O-acetyltransferase activity	2.29E-03
20	GO:0016832: aldehyde-lyase activity	2.35E-03
21	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.53E-03
22	GO:0030247: polysaccharide binding	2.84E-03
23	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.63E-03
24	GO:0008173: RNA methyltransferase activity	3.67E-03
25	GO:0043621: protein self-association	5.54E-03
26	GO:0005524: ATP binding	6.51E-03
27	GO:0005262: calcium channel activity	6.86E-03
28	GO:0003725: double-stranded RNA binding	6.86E-03
29	GO:0052689: carboxylic ester hydrolase activity	7.53E-03
30	GO:0003777: microtubule motor activity	7.64E-03
31	GO:0015171: amino acid transmembrane transporter activity	7.64E-03
32	GO:0004190: aspartic-type endopeptidase activity	8.08E-03
33	GO:0003712: transcription cofactor activity	8.08E-03
34	GO:0042803: protein homodimerization activity	8.84E-03
35	GO:0005528: FK506 binding	9.37E-03
36	GO:0005507: copper ion binding	9.42E-03
37	GO:0033612: receptor serine/threonine kinase binding	1.07E-02
38	GO:0009055: electron carrier activity	1.19E-02
39	GO:0016301: kinase activity	1.24E-02
40	GO:0003727: single-stranded RNA binding	1.29E-02
41	GO:0004812: aminoacyl-tRNA ligase activity	1.37E-02
42	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	1.52E-02
43	GO:0016853: isomerase activity	1.60E-02
44	GO:0008289: lipid binding	1.66E-02
45	GO:0019901: protein kinase binding	1.68E-02
46	GO:0008017: microtubule binding	1.79E-02
47	GO:0004518: nuclease activity	1.85E-02
48	GO:0005515: protein binding	1.93E-02
49	GO:0000156: phosphorelay response regulator activity	1.94E-02
50	GO:0005200: structural constituent of cytoskeleton	2.11E-02
51	GO:0102483: scopolin beta-glucosidase activity	2.58E-02
52	GO:0003723: RNA binding	2.62E-02
53	GO:0016788: hydrolase activity, acting on ester bonds	2.69E-02
54	GO:0003682: chromatin binding	2.79E-02
55	GO:0004672: protein kinase activity	2.83E-02
56	GO:0043565: sequence-specific DNA binding	2.84E-02
57	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.08E-02
58	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.18E-02
59	GO:0003677: DNA binding	3.22E-02
60	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.28E-02
61	GO:0003697: single-stranded DNA binding	3.28E-02
62	GO:0003993: acid phosphatase activity	3.39E-02
63	GO:0008422: beta-glucosidase activity	3.50E-02
64	GO:0004871: signal transducer activity	4.10E-02
65	GO:0005198: structural molecule activity	4.27E-02
66	GO:0015293: symporter activity	4.27E-02
67	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.39E-02
68	GO:0051287: NAD binding	4.50E-02
69	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.86E-02
70	GO:0016298: lipase activity	4.98E-02
71	GO:0003690: double-stranded DNA binding	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0019897: extrinsic component of plasma membrane	6.61E-04
2	GO:0030139: endocytic vesicle	6.61E-04
3	GO:0032585: multivesicular body membrane	9.45E-04
4	GO:0005828: kinetochore microtubule	1.25E-03
5	GO:0000776: kinetochore	1.59E-03
6	GO:0010369: chromocenter	2.35E-03
7	GO:0000777: condensed chromosome kinetochore	2.35E-03
8	GO:0005667: transcription factor complex	2.70E-03
9	GO:0009986: cell surface	2.77E-03
10	GO:0046658: anchored component of plasma membrane	4.14E-03
11	GO:0005876: spindle microtubule	4.65E-03
12	GO:0000418: DNA-directed RNA polymerase IV complex	5.18E-03
13	GO:0005875: microtubule associated complex	8.71E-03
14	GO:0031225: anchored component of membrane	1.08E-02
15	GO:0015629: actin cytoskeleton	1.22E-02
16	GO:0005871: kinesin complex	1.37E-02
17	GO:0005886: plasma membrane	1.79E-02
18	GO:0009534: chloroplast thylakoid	2.85E-02
19	GO:0005874: microtubule	3.16E-02
20	GO:0090406: pollen tube	3.93E-02