GO Enrichment Analysis of Co-expressed Genes with
AT1G75100
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905157: positive regulation of photosynthesis | 0.00E+00 |
| 2 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 3 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 4 | GO:0015995: chlorophyll biosynthetic process | 1.39E-06 |
| 5 | GO:0009773: photosynthetic electron transport in photosystem I | 1.72E-05 |
| 6 | GO:0032259: methylation | 1.80E-05 |
| 7 | GO:0055114: oxidation-reduction process | 1.93E-05 |
| 8 | GO:0015994: chlorophyll metabolic process | 3.46E-05 |
| 9 | GO:0034599: cellular response to oxidative stress | 7.06E-05 |
| 10 | GO:0006662: glycerol ether metabolic process | 1.59E-04 |
| 11 | GO:0009642: response to light intensity | 1.91E-04 |
| 12 | GO:0019252: starch biosynthetic process | 1.95E-04 |
| 13 | GO:0019276: UDP-N-acetylgalactosamine metabolic process | 2.20E-04 |
| 14 | GO:0010028: xanthophyll cycle | 2.20E-04 |
| 15 | GO:0034337: RNA folding | 2.20E-04 |
| 16 | GO:0006047: UDP-N-acetylglucosamine metabolic process | 2.20E-04 |
| 17 | GO:0005980: glycogen catabolic process | 2.20E-04 |
| 18 | GO:0009090: homoserine biosynthetic process | 2.20E-04 |
| 19 | GO:1901657: glycosyl compound metabolic process | 2.56E-04 |
| 20 | GO:0005982: starch metabolic process | 3.41E-04 |
| 21 | GO:0043085: positive regulation of catalytic activity | 4.63E-04 |
| 22 | GO:0016122: xanthophyll metabolic process | 4.90E-04 |
| 23 | GO:0015804: neutral amino acid transport | 4.90E-04 |
| 24 | GO:0015979: photosynthesis | 5.01E-04 |
| 25 | GO:0006696: ergosterol biosynthetic process | 7.98E-04 |
| 26 | GO:0006048: UDP-N-acetylglucosamine biosynthetic process | 7.98E-04 |
| 27 | GO:0006518: peptide metabolic process | 7.98E-04 |
| 28 | GO:0006636: unsaturated fatty acid biosynthetic process | 8.40E-04 |
| 29 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.02E-03 |
| 30 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.14E-03 |
| 31 | GO:0009067: aspartate family amino acid biosynthetic process | 1.14E-03 |
| 32 | GO:1902358: sulfate transmembrane transport | 1.14E-03 |
| 33 | GO:0045338: farnesyl diphosphate metabolic process | 1.14E-03 |
| 34 | GO:0006020: inositol metabolic process | 1.14E-03 |
| 35 | GO:0009152: purine ribonucleotide biosynthetic process | 1.14E-03 |
| 36 | GO:0046653: tetrahydrofolate metabolic process | 1.14E-03 |
| 37 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.14E-03 |
| 38 | GO:0071786: endoplasmic reticulum tubular network organization | 1.14E-03 |
| 39 | GO:0010021: amylopectin biosynthetic process | 1.51E-03 |
| 40 | GO:0009765: photosynthesis, light harvesting | 1.51E-03 |
| 41 | GO:0006109: regulation of carbohydrate metabolic process | 1.51E-03 |
| 42 | GO:0006021: inositol biosynthetic process | 1.51E-03 |
| 43 | GO:0006656: phosphatidylcholine biosynthetic process | 1.93E-03 |
| 44 | GO:0006564: L-serine biosynthetic process | 1.93E-03 |
| 45 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 2.38E-03 |
| 46 | GO:0032502: developmental process | 2.38E-03 |
| 47 | GO:0046855: inositol phosphate dephosphorylation | 2.38E-03 |
| 48 | GO:1902456: regulation of stomatal opening | 2.38E-03 |
| 49 | GO:0010190: cytochrome b6f complex assembly | 2.38E-03 |
| 50 | GO:0009643: photosynthetic acclimation | 2.38E-03 |
| 51 | GO:0045454: cell redox homeostasis | 2.61E-03 |
| 52 | GO:0009088: threonine biosynthetic process | 2.86E-03 |
| 53 | GO:0071333: cellular response to glucose stimulus | 2.86E-03 |
| 54 | GO:1901259: chloroplast rRNA processing | 2.86E-03 |
| 55 | GO:0016126: sterol biosynthetic process | 3.21E-03 |
| 56 | GO:0010196: nonphotochemical quenching | 3.36E-03 |
| 57 | GO:0008272: sulfate transport | 3.36E-03 |
| 58 | GO:0009769: photosynthesis, light harvesting in photosystem II | 3.36E-03 |
| 59 | GO:0009645: response to low light intensity stimulus | 3.36E-03 |
| 60 | GO:0005978: glycogen biosynthetic process | 3.90E-03 |
| 61 | GO:0042255: ribosome assembly | 3.90E-03 |
| 62 | GO:0006353: DNA-templated transcription, termination | 3.90E-03 |
| 63 | GO:0070413: trehalose metabolism in response to stress | 3.90E-03 |
| 64 | GO:0030091: protein repair | 3.90E-03 |
| 65 | GO:0015996: chlorophyll catabolic process | 4.47E-03 |
| 66 | GO:0006098: pentose-phosphate shunt | 5.06E-03 |
| 67 | GO:0009821: alkaloid biosynthetic process | 5.06E-03 |
| 68 | GO:0006779: porphyrin-containing compound biosynthetic process | 5.68E-03 |
| 69 | GO:0009086: methionine biosynthetic process | 5.68E-03 |
| 70 | GO:0042761: very long-chain fatty acid biosynthetic process | 5.68E-03 |
| 71 | GO:0009641: shade avoidance | 6.32E-03 |
| 72 | GO:0006782: protoporphyrinogen IX biosynthetic process | 6.32E-03 |
| 73 | GO:0010114: response to red light | 6.83E-03 |
| 74 | GO:0009089: lysine biosynthetic process via diaminopimelate | 6.98E-03 |
| 75 | GO:0072593: reactive oxygen species metabolic process | 6.98E-03 |
| 76 | GO:0006790: sulfur compound metabolic process | 7.68E-03 |
| 77 | GO:0018107: peptidyl-threonine phosphorylation | 8.39E-03 |
| 78 | GO:0006094: gluconeogenesis | 8.39E-03 |
| 79 | GO:0030048: actin filament-based movement | 8.39E-03 |
| 80 | GO:0010223: secondary shoot formation | 9.13E-03 |
| 81 | GO:0009266: response to temperature stimulus | 9.13E-03 |
| 82 | GO:0010207: photosystem II assembly | 9.13E-03 |
| 83 | GO:0006364: rRNA processing | 9.22E-03 |
| 84 | GO:0006813: potassium ion transport | 9.22E-03 |
| 85 | GO:0046854: phosphatidylinositol phosphorylation | 9.90E-03 |
| 86 | GO:0019762: glucosinolate catabolic process | 1.07E-02 |
| 87 | GO:0005992: trehalose biosynthetic process | 1.15E-02 |
| 88 | GO:0051260: protein homooligomerization | 1.32E-02 |
| 89 | GO:0061077: chaperone-mediated protein folding | 1.32E-02 |
| 90 | GO:0009269: response to desiccation | 1.32E-02 |
| 91 | GO:0003333: amino acid transmembrane transport | 1.32E-02 |
| 92 | GO:0019748: secondary metabolic process | 1.40E-02 |
| 93 | GO:0016226: iron-sulfur cluster assembly | 1.40E-02 |
| 94 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.40E-02 |
| 95 | GO:0071215: cellular response to abscisic acid stimulus | 1.49E-02 |
| 96 | GO:0005975: carbohydrate metabolic process | 1.53E-02 |
| 97 | GO:0009306: protein secretion | 1.58E-02 |
| 98 | GO:0009058: biosynthetic process | 1.74E-02 |
| 99 | GO:0009741: response to brassinosteroid | 1.87E-02 |
| 100 | GO:0009630: gravitropism | 2.28E-02 |
| 101 | GO:0001666: response to hypoxia | 2.82E-02 |
| 102 | GO:0018298: protein-chromophore linkage | 3.41E-02 |
| 103 | GO:0009813: flavonoid biosynthetic process | 3.53E-02 |
| 104 | GO:0010218: response to far red light | 3.66E-02 |
| 105 | GO:0006865: amino acid transport | 3.91E-02 |
| 106 | GO:0009637: response to blue light | 4.03E-02 |
| 107 | GO:0009853: photorespiration | 4.03E-02 |
| 108 | GO:0006810: transport | 4.32E-02 |
| 109 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.51E-02 |
| 110 | GO:0006631: fatty acid metabolic process | 4.56E-02 |
| 111 | GO:0000209: protein polyubiquitination | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 2 | GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity | 0.00E+00 |
| 3 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 4 | GO:0047668: amygdalin beta-glucosidase activity | 0.00E+00 |
| 5 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 6 | GO:0080083: beta-gentiobiose beta-glucosidase activity | 0.00E+00 |
| 7 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 8 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 0.00E+00 |
| 9 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 10 | GO:0004567: beta-mannosidase activity | 0.00E+00 |
| 11 | GO:0033840: NDP-glucose-starch glucosyltransferase activity | 0.00E+00 |
| 12 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
| 13 | GO:0080082: esculin beta-glucosidase activity | 0.00E+00 |
| 14 | GO:0018708: thiol S-methyltransferase activity | 2.28E-06 |
| 15 | GO:0004373: glycogen (starch) synthase activity | 8.31E-06 |
| 16 | GO:0008168: methyltransferase activity | 3.08E-05 |
| 17 | GO:0009011: starch synthase activity | 3.46E-05 |
| 18 | GO:0047134: protein-disulfide reductase activity | 1.27E-04 |
| 19 | GO:0004791: thioredoxin-disulfide reductase activity | 1.76E-04 |
| 20 | GO:0045486: naringenin 3-dioxygenase activity | 2.20E-04 |
| 21 | GO:0035671: enone reductase activity | 2.20E-04 |
| 22 | GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity | 2.20E-04 |
| 23 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 2.20E-04 |
| 24 | GO:0080079: cellobiose glucosidase activity | 2.20E-04 |
| 25 | GO:0008184: glycogen phosphorylase activity | 2.20E-04 |
| 26 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 2.20E-04 |
| 27 | GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity | 2.20E-04 |
| 28 | GO:0004645: phosphorylase activity | 2.20E-04 |
| 29 | GO:0034256: chlorophyll(ide) b reductase activity | 2.20E-04 |
| 30 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.56E-04 |
| 31 | GO:0008047: enzyme activator activity | 4.00E-04 |
| 32 | GO:0102483: scopolin beta-glucosidase activity | 4.37E-04 |
| 33 | GO:0047746: chlorophyllase activity | 4.90E-04 |
| 34 | GO:0042389: omega-3 fatty acid desaturase activity | 4.90E-04 |
| 35 | GO:0004617: phosphoglycerate dehydrogenase activity | 4.90E-04 |
| 36 | GO:0052832: inositol monophosphate 3-phosphatase activity | 4.90E-04 |
| 37 | GO:0033201: alpha-1,4-glucan synthase activity | 4.90E-04 |
| 38 | GO:0008934: inositol monophosphate 1-phosphatase activity | 4.90E-04 |
| 39 | GO:0052833: inositol monophosphate 4-phosphatase activity | 4.90E-04 |
| 40 | GO:0004412: homoserine dehydrogenase activity | 4.90E-04 |
| 41 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 4.90E-04 |
| 42 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 4.90E-04 |
| 43 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 4.90E-04 |
| 44 | GO:0015172: acidic amino acid transmembrane transporter activity | 4.90E-04 |
| 45 | GO:0008422: beta-glucosidase activity | 7.52E-04 |
| 46 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 7.98E-04 |
| 47 | GO:0008864: formyltetrahydrofolate deformylase activity | 7.98E-04 |
| 48 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 7.98E-04 |
| 49 | GO:0043169: cation binding | 7.98E-04 |
| 50 | GO:0004751: ribose-5-phosphate isomerase activity | 7.98E-04 |
| 51 | GO:0031409: pigment binding | 8.40E-04 |
| 52 | GO:0004072: aspartate kinase activity | 1.14E-03 |
| 53 | GO:0019201: nucleotide kinase activity | 1.14E-03 |
| 54 | GO:0015175: neutral amino acid transmembrane transporter activity | 1.14E-03 |
| 55 | GO:0016851: magnesium chelatase activity | 1.14E-03 |
| 56 | GO:0022890: inorganic cation transmembrane transporter activity | 1.14E-03 |
| 57 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.51E-03 |
| 58 | GO:0015035: protein disulfide oxidoreductase activity | 2.17E-03 |
| 59 | GO:0008200: ion channel inhibitor activity | 2.38E-03 |
| 60 | GO:0004332: fructose-bisphosphate aldolase activity | 2.38E-03 |
| 61 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 2.86E-03 |
| 62 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.86E-03 |
| 63 | GO:0004017: adenylate kinase activity | 2.86E-03 |
| 64 | GO:0004602: glutathione peroxidase activity | 2.86E-03 |
| 65 | GO:0016597: amino acid binding | 3.04E-03 |
| 66 | GO:0016168: chlorophyll binding | 3.40E-03 |
| 67 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.51E-03 |
| 68 | GO:0016491: oxidoreductase activity | 3.65E-03 |
| 69 | GO:0008271: secondary active sulfate transmembrane transporter activity | 4.47E-03 |
| 70 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 4.47E-03 |
| 71 | GO:0071949: FAD binding | 5.06E-03 |
| 72 | GO:0016844: strictosidine synthase activity | 5.68E-03 |
| 73 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 5.68E-03 |
| 74 | GO:0047372: acylglycerol lipase activity | 6.98E-03 |
| 75 | GO:0015386: potassium:proton antiporter activity | 6.98E-03 |
| 76 | GO:0015293: symporter activity | 7.68E-03 |
| 77 | GO:0015116: sulfate transmembrane transporter activity | 7.68E-03 |
| 78 | GO:0031072: heat shock protein binding | 8.39E-03 |
| 79 | GO:0004022: alcohol dehydrogenase (NAD) activity | 8.39E-03 |
| 80 | GO:0003774: motor activity | 9.13E-03 |
| 81 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 9.13E-03 |
| 82 | GO:0051536: iron-sulfur cluster binding | 1.15E-02 |
| 83 | GO:0031418: L-ascorbic acid binding | 1.15E-02 |
| 84 | GO:0004857: enzyme inhibitor activity | 1.15E-02 |
| 85 | GO:0005528: FK506 binding | 1.15E-02 |
| 86 | GO:0015079: potassium ion transmembrane transporter activity | 1.23E-02 |
| 87 | GO:0016779: nucleotidyltransferase activity | 1.40E-02 |
| 88 | GO:0030570: pectate lyase activity | 1.49E-02 |
| 89 | GO:0003727: single-stranded RNA binding | 1.58E-02 |
| 90 | GO:0003756: protein disulfide isomerase activity | 1.58E-02 |
| 91 | GO:0019843: rRNA binding | 1.65E-02 |
| 92 | GO:0005249: voltage-gated potassium channel activity | 1.77E-02 |
| 93 | GO:0015299: solute:proton antiporter activity | 1.97E-02 |
| 94 | GO:0048038: quinone binding | 2.17E-02 |
| 95 | GO:0016791: phosphatase activity | 2.49E-02 |
| 96 | GO:0008236: serine-type peptidase activity | 3.29E-02 |
| 97 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 3.29E-02 |
| 98 | GO:0004222: metalloendopeptidase activity | 3.66E-02 |
| 99 | GO:0003746: translation elongation factor activity | 4.03E-02 |
| 100 | GO:0003993: acid phosphatase activity | 4.16E-02 |
| 101 | GO:0050661: NADP binding | 4.43E-02 |
| 102 | GO:0004185: serine-type carboxypeptidase activity | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 4.76E-24 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 2.96E-16 |
| 3 | GO:0009534: chloroplast thylakoid | 2.18E-15 |
| 4 | GO:0031977: thylakoid lumen | 2.07E-07 |
| 5 | GO:0009941: chloroplast envelope | 7.43E-07 |
| 6 | GO:0009570: chloroplast stroma | 1.02E-06 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 4.02E-06 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 7.45E-06 |
| 9 | GO:0042651: thylakoid membrane | 6.57E-05 |
| 10 | GO:0009579: thylakoid | 1.69E-04 |
| 11 | GO:0009501: amyloplast | 1.91E-04 |
| 12 | GO:0031969: chloroplast membrane | 3.94E-04 |
| 13 | GO:0010287: plastoglobule | 4.16E-04 |
| 14 | GO:0009569: chloroplast starch grain | 4.90E-04 |
| 15 | GO:0030076: light-harvesting complex | 7.56E-04 |
| 16 | GO:0010007: magnesium chelatase complex | 7.98E-04 |
| 17 | GO:0033281: TAT protein transport complex | 7.98E-04 |
| 18 | GO:0009654: photosystem II oxygen evolving complex | 1.02E-03 |
| 19 | GO:0008076: voltage-gated potassium channel complex | 1.14E-03 |
| 20 | GO:0071782: endoplasmic reticulum tubular network | 1.14E-03 |
| 21 | GO:0009517: PSII associated light-harvesting complex II | 1.51E-03 |
| 22 | GO:0019898: extrinsic component of membrane | 2.09E-03 |
| 23 | GO:0005623: cell | 2.87E-03 |
| 24 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 3.90E-03 |
| 25 | GO:0016459: myosin complex | 6.32E-03 |
| 26 | GO:0032040: small-subunit processome | 7.68E-03 |
| 27 | GO:0009508: plastid chromosome | 8.39E-03 |
| 28 | GO:0030095: chloroplast photosystem II | 9.13E-03 |
| 29 | GO:0015935: small ribosomal subunit | 1.32E-02 |
| 30 | GO:0009522: photosystem I | 1.97E-02 |
| 31 | GO:0009523: photosystem II | 2.07E-02 |
| 32 | GO:0010319: stromule | 2.60E-02 |
| 33 | GO:0009295: nucleoid | 2.60E-02 |