co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G74840

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045014: negative regulation of transcription by glucose	0.00E+00
2	GO:0061062: regulation of nematode larval development	6.25E-07
3	GO:0032958: inositol phosphate biosynthetic process	1.10E-04
4	GO:0045786: negative regulation of cell cycle	1.10E-04
5	GO:0010726: positive regulation of hydrogen peroxide metabolic process	1.10E-04
6	GO:0006863: purine nucleobase transport	3.29E-04
7	GO:0048366: leaf development	4.21E-04
8	GO:0048575: short-day photoperiodism, flowering	4.25E-04
9	GO:0090506: axillary shoot meristem initiation	4.25E-04
10	GO:0009686: gibberellin biosynthetic process	5.28E-04
11	GO:0010321: regulation of vegetative phase change	6.10E-04
12	GO:0006020: inositol metabolic process	6.10E-04
13	GO:0042991: transcription factor import into nucleus	8.10E-04
14	GO:0048364: root development	8.78E-04
15	GO:0006351: transcription, DNA-templated	9.06E-04
16	GO:0010942: positive regulation of cell death	1.25E-03
17	GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity	1.25E-03
18	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.49E-03
19	GO:0009733: response to auxin	1.63E-03
20	GO:0007050: cell cycle arrest	1.75E-03
21	GO:0009704: de-etiolation	2.03E-03
22	GO:0042255: ribosome assembly	2.03E-03
23	GO:0006353: DNA-templated transcription, termination	2.03E-03
24	GO:0048589: developmental growth	2.62E-03
25	GO:0009641: shade avoidance	3.25E-03
26	GO:0045892: negative regulation of transcription, DNA-templated	3.58E-03
27	GO:0008285: negative regulation of cell proliferation	3.59E-03
28	GO:0010152: pollen maturation	3.93E-03
29	GO:0005983: starch catabolic process	3.93E-03
30	GO:0010102: lateral root morphogenesis	4.30E-03
31	GO:0010223: secondary shoot formation	4.66E-03
32	GO:0009887: animal organ morphogenesis	4.66E-03
33	GO:0006302: double-strand break repair	4.66E-03
34	GO:0048768: root hair cell tip growth	4.66E-03
35	GO:0009740: gibberellic acid mediated signaling pathway	4.69E-03
36	GO:0009624: response to nematode	4.98E-03
37	GO:0009969: xyloglucan biosynthetic process	5.04E-03
38	GO:0080147: root hair cell development	5.84E-03
39	GO:0051321: meiotic cell cycle	6.67E-03
40	GO:0016114: terpenoid biosynthetic process	6.67E-03
41	GO:0001944: vasculature development	7.55E-03
42	GO:0048443: stamen development	8.00E-03
43	GO:0006355: regulation of transcription, DNA-templated	8.23E-03
44	GO:0000271: polysaccharide biosynthetic process	8.93E-03
45	GO:0000413: protein peptidyl-prolyl isomerization	8.93E-03
46	GO:0016567: protein ubiquitination	9.34E-03
47	GO:0045489: pectin biosynthetic process	9.41E-03
48	GO:0006470: protein dephosphorylation	9.83E-03
49	GO:0048825: cotyledon development	1.04E-02
50	GO:0051301: cell division	1.06E-02
51	GO:0002229: defense response to oomycetes	1.09E-02
52	GO:0032502: developmental process	1.14E-02
53	GO:0009567: double fertilization forming a zygote and endosperm	1.25E-02
54	GO:0019760: glucosinolate metabolic process	1.25E-02
55	GO:0048573: photoperiodism, flowering	1.59E-02
56	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.71E-02
57	GO:0009817: defense response to fungus, incompatible interaction	1.71E-02
58	GO:0016051: carbohydrate biosynthetic process	2.02E-02
59	GO:0006839: mitochondrial transport	2.22E-02
60	GO:0071555: cell wall organization	2.31E-02
61	GO:0042546: cell wall biogenesis	2.49E-02
62	GO:0009664: plant-type cell wall organization	2.85E-02
63	GO:0009736: cytokinin-activated signaling pathway	2.99E-02
64	GO:0009873: ethylene-activated signaling pathway	3.16E-02
65	GO:0009734: auxin-activated signaling pathway	3.44E-02
66	GO:0048367: shoot system development	3.45E-02
67	GO:0009908: flower development	3.92E-02
68	GO:0009742: brassinosteroid mediated signaling pathway	4.01E-02
69	GO:0009416: response to light stimulus	4.33E-02

Rank	GO Term	Adjusted P value
1	GO:0009899: ent-kaurene synthase activity	0.00E+00
2	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	1.10E-04
3	GO:0000829: inositol heptakisphosphate kinase activity	1.10E-04
4	GO:0000828: inositol hexakisphosphate kinase activity	1.10E-04
5	GO:0019156: isoamylase activity	2.57E-04
6	GO:0017022: myosin binding	2.57E-04
7	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	2.57E-04
8	GO:0005345: purine nucleobase transmembrane transporter activity	4.03E-04
9	GO:0045544: gibberellin 20-oxidase activity	6.10E-04
10	GO:0010011: auxin binding	8.10E-04
11	GO:0030332: cyclin binding	1.25E-03
12	GO:0004556: alpha-amylase activity	1.25E-03
13	GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity	1.25E-03
14	GO:0008378: galactosyltransferase activity	3.93E-03
15	GO:0004722: protein serine/threonine phosphatase activity	3.94E-03
16	GO:0003712: transcription cofactor activity	5.04E-03
17	GO:0033612: receptor serine/threonine kinase binding	6.67E-03
18	GO:0008408: 3'-5' exonuclease activity	6.67E-03
19	GO:0010333: terpene synthase activity	6.67E-03
20	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	7.11E-03
21	GO:0003727: single-stranded RNA binding	8.00E-03
22	GO:0003700: transcription factor activity, sequence-specific DNA binding	9.48E-03
23	GO:0016759: cellulose synthase activity	1.25E-02
24	GO:0000287: magnesium ion binding	1.31E-02
25	GO:0005096: GTPase activator activity	1.77E-02
26	GO:0030145: manganese ion binding	1.89E-02
27	GO:0004871: signal transducer activity	2.08E-02
28	GO:0043565: sequence-specific DNA binding	2.28E-02
29	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.70E-02
30	GO:0003690: double-stranded DNA binding	3.07E-02
31	GO:0003777: microtubule motor activity	3.22E-02
32	GO:0046983: protein dimerization activity	3.32E-02
33	GO:0015035: protein disulfide oxidoreductase activity	3.93E-02
34	GO:0016758: transferase activity, transferring hexosyl groups	4.43E-02
35	GO:0019843: rRNA binding	4.51E-02
36	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0000791: euchromatin	1.10E-04
3	GO:0030870: Mre11 complex	2.57E-04
4	GO:0009569: chloroplast starch grain	2.57E-04
5	GO:0009531: secondary cell wall	6.10E-04
6	GO:0000795: synaptonemal complex	1.02E-03
7	GO:0009508: plastid chromosome	4.30E-03
8	GO:0005875: microtubule associated complex	5.44E-03
9	GO:0009532: plastid stroma	6.67E-03
10	GO:0009504: cell plate	1.04E-02
11	GO:0000785: chromatin	1.14E-02
12	GO:0009295: nucleoid	1.30E-02
13	GO:0000139: Golgi membrane	3.37E-02
14	GO:0010008: endosome membrane	3.45E-02
15	GO:0005634: nucleus	4.00E-02
16	GO:0005654: nucleoplasm	4.43E-02