co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G74670

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019685: photosynthesis, dark reaction	0.00E+00
2	GO:0009583: detection of light stimulus	0.00E+00
3	GO:0045176: apical protein localization	0.00E+00
4	GO:0071000: response to magnetism	0.00E+00
5	GO:0046460: neutral lipid biosynthetic process	0.00E+00
6	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
7	GO:0006002: fructose 6-phosphate metabolic process	8.11E-05
8	GO:0007389: pattern specification process	8.11E-05
9	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	1.08E-04
10	GO:0051171: regulation of nitrogen compound metabolic process	1.08E-04
11	GO:0072387: flavin adenine dinucleotide metabolic process	1.08E-04
12	GO:0043609: regulation of carbon utilization	1.08E-04
13	GO:0006436: tryptophanyl-tRNA aminoacylation	1.08E-04
14	GO:0010275: NAD(P)H dehydrogenase complex assembly	2.52E-04
15	GO:0010343: singlet oxygen-mediated programmed cell death	2.52E-04
16	GO:1901529: positive regulation of anion channel activity	2.52E-04
17	GO:0006435: threonyl-tRNA aminoacylation	2.52E-04
18	GO:0080005: photosystem stoichiometry adjustment	2.52E-04
19	GO:0010617: circadian regulation of calcium ion oscillation	2.52E-04
20	GO:0099402: plant organ development	2.52E-04
21	GO:1902448: positive regulation of shade avoidance	4.19E-04
22	GO:0006000: fructose metabolic process	4.19E-04
23	GO:0006013: mannose metabolic process	4.19E-04
24	GO:1901672: positive regulation of systemic acquired resistance	4.19E-04
25	GO:0010255: glucose mediated signaling pathway	6.01E-04
26	GO:1901332: negative regulation of lateral root development	6.01E-04
27	GO:2001141: regulation of RNA biosynthetic process	6.01E-04
28	GO:0015846: polyamine transport	7.98E-04
29	GO:1902347: response to strigolactone	7.98E-04
30	GO:0010117: photoprotection	1.01E-03
31	GO:0046283: anthocyanin-containing compound metabolic process	1.01E-03
32	GO:0010252: auxin homeostasis	1.03E-03
33	GO:0042549: photosystem II stabilization	1.23E-03
34	GO:1901371: regulation of leaf morphogenesis	1.23E-03
35	GO:0060918: auxin transport	1.23E-03
36	GO:0048827: phyllome development	1.23E-03
37	GO:0010310: regulation of hydrogen peroxide metabolic process	1.47E-03
38	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.47E-03
39	GO:0034389: lipid particle organization	1.47E-03
40	GO:0009942: longitudinal axis specification	1.47E-03
41	GO:0019745: pentacyclic triterpenoid biosynthetic process	1.73E-03
42	GO:0051510: regulation of unidimensional cell growth	1.73E-03
43	GO:0009416: response to light stimulus	1.88E-03
44	GO:0009704: de-etiolation	2.00E-03
45	GO:0071482: cellular response to light stimulus	2.28E-03
46	GO:0022900: electron transport chain	2.28E-03
47	GO:0010052: guard cell differentiation	2.28E-03
48	GO:0009926: auxin polar transport	2.56E-03
49	GO:0019432: triglyceride biosynthetic process	2.57E-03
50	GO:0090305: nucleic acid phosphodiester bond hydrolysis	2.57E-03
51	GO:0080167: response to karrikin	2.71E-03
52	GO:1900426: positive regulation of defense response to bacterium	2.88E-03
53	GO:0009638: phototropism	2.88E-03
54	GO:0010380: regulation of chlorophyll biosynthetic process	2.88E-03
55	GO:0006415: translational termination	3.53E-03
56	GO:0006352: DNA-templated transcription, initiation	3.53E-03
57	GO:0009785: blue light signaling pathway	4.23E-03
58	GO:0010229: inflorescence development	4.23E-03
59	GO:0010075: regulation of meristem growth	4.23E-03
60	GO:0010540: basipetal auxin transport	4.59E-03
61	GO:0006071: glycerol metabolic process	5.35E-03
62	GO:0010187: negative regulation of seed germination	5.75E-03
63	GO:2000377: regulation of reactive oxygen species metabolic process	5.75E-03
64	GO:0006418: tRNA aminoacylation for protein translation	6.15E-03
65	GO:0010073: meristem maintenance	6.15E-03
66	GO:0048511: rhythmic process	6.56E-03
67	GO:0042744: hydrogen peroxide catabolic process	6.92E-03
68	GO:0007623: circadian rhythm	8.39E-03
69	GO:0010118: stomatal movement	8.79E-03
70	GO:0048868: pollen tube development	9.26E-03
71	GO:0009646: response to absence of light	9.74E-03
72	GO:0042752: regulation of circadian rhythm	9.74E-03
73	GO:0010468: regulation of gene expression	1.00E-02
74	GO:0048825: cotyledon development	1.02E-02
75	GO:0002229: defense response to oomycetes	1.07E-02
76	GO:0010583: response to cyclopentenone	1.12E-02
77	GO:0071281: cellular response to iron ion	1.18E-02
78	GO:0055085: transmembrane transport	1.24E-02
79	GO:0009911: positive regulation of flower development	1.39E-02
80	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.67E-02
81	GO:0048481: plant ovule development	1.68E-02
82	GO:0018298: protein-chromophore linkage	1.68E-02
83	GO:0046777: protein autophosphorylation	1.73E-02
84	GO:0006499: N-terminal protein myristoylation	1.80E-02
85	GO:0010218: response to far red light	1.80E-02
86	GO:0009910: negative regulation of flower development	1.86E-02
87	GO:0007568: aging	1.86E-02
88	GO:0009853: photorespiration	1.99E-02
89	GO:0009637: response to blue light	1.99E-02
90	GO:0006979: response to oxidative stress	2.27E-02
91	GO:0051707: response to other organism	2.38E-02
92	GO:0009640: photomorphogenesis	2.38E-02
93	GO:0010114: response to red light	2.38E-02
94	GO:0048364: root development	2.49E-02
95	GO:0009644: response to high light intensity	2.52E-02
96	GO:0009664: plant-type cell wall organization	2.80E-02
97	GO:0006508: proteolysis	2.95E-02
98	GO:0051603: proteolysis involved in cellular protein catabolic process	3.02E-02
99	GO:0006417: regulation of translation	3.17E-02
100	GO:0006096: glycolytic process	3.32E-02
101	GO:0043086: negative regulation of catalytic activity	3.32E-02
102	GO:0009734: auxin-activated signaling pathway	3.36E-02
103	GO:0009740: gibberellic acid mediated signaling pathway	3.63E-02
104	GO:0009553: embryo sac development	3.70E-02
105	GO:0009790: embryo development	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0102245: lupan-3beta,20-diol synthase activity	0.00E+00
2	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
3	GO:0019808: polyamine binding	0.00E+00
4	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
5	GO:0003858: 3-hydroxybutyrate dehydrogenase activity	0.00E+00
6	GO:0004830: tryptophan-tRNA ligase activity	1.08E-04
7	GO:0009672: auxin:proton symporter activity	1.21E-04
8	GO:0010329: auxin efflux transmembrane transporter activity	2.25E-04
9	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	2.52E-04
10	GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	2.52E-04
11	GO:0004829: threonine-tRNA ligase activity	2.52E-04
12	GO:0042300: beta-amyrin synthase activity	4.19E-04
13	GO:0030267: glyoxylate reductase (NADP) activity	4.19E-04
14	GO:0016805: dipeptidase activity	4.19E-04
15	GO:0042299: lupeol synthase activity	6.01E-04
16	GO:0009882: blue light photoreceptor activity	6.01E-04
17	GO:0001053: plastid sigma factor activity	7.98E-04
18	GO:0016987: sigma factor activity	7.98E-04
19	GO:2001070: starch binding	1.23E-03
20	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.47E-03
21	GO:0004144: diacylglycerol O-acyltransferase activity	1.47E-03
22	GO:0004559: alpha-mannosidase activity	1.47E-03
23	GO:0003872: 6-phosphofructokinase activity	1.73E-03
24	GO:0071949: FAD binding	2.57E-03
25	GO:0003747: translation release factor activity	2.57E-03
26	GO:0051537: 2 iron, 2 sulfur cluster binding	2.76E-03
27	GO:0004857: enzyme inhibitor activity	5.75E-03
28	GO:0046872: metal ion binding	6.17E-03
29	GO:0004176: ATP-dependent peptidase activity	6.56E-03
30	GO:0004812: aminoacyl-tRNA ligase activity	8.32E-03
31	GO:0008536: Ran GTPase binding	9.26E-03
32	GO:0001085: RNA polymerase II transcription factor binding	9.26E-03
33	GO:0004672: protein kinase activity	9.82E-03
34	GO:0004518: nuclease activity	1.12E-02
35	GO:0008237: metallopeptidase activity	1.28E-02
36	GO:0004601: peroxidase activity	1.30E-02
37	GO:0003682: chromatin binding	1.38E-02
38	GO:0004721: phosphoprotein phosphatase activity	1.56E-02
39	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.86E-02
40	GO:0004871: signal transducer activity	2.03E-02
41	GO:0003993: acid phosphatase activity	2.05E-02
42	GO:0004722: protein serine/threonine phosphatase activity	2.12E-02
43	GO:0004185: serine-type carboxypeptidase activity	2.38E-02
44	GO:0051287: NAD binding	2.73E-02
45	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.94E-02
46	GO:0019843: rRNA binding	4.44E-02
47	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0042597: periplasmic space	0.00E+00
2	GO:0009507: chloroplast	1.95E-05
3	GO:0016605: PML body	4.19E-04
4	GO:0005945: 6-phosphofructokinase complex	1.01E-03
5	GO:0005811: lipid particle	2.28E-03
6	GO:0016604: nuclear body	2.88E-03
7	GO:0045271: respiratory chain complex I	6.15E-03
8	GO:0005770: late endosome	9.26E-03
9	GO:0009570: chloroplast stroma	1.18E-02
10	GO:0005667: transcription factor complex	1.51E-02
11	GO:0009707: chloroplast outer membrane	1.68E-02
12	GO:0005773: vacuole	2.33E-02
13	GO:0031966: mitochondrial membrane	2.80E-02
14	GO:0009505: plant-type cell wall	2.98E-02
15	GO:0005747: mitochondrial respiratory chain complex I	3.39E-02
16	GO:0005886: plasma membrane	3.54E-02