co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G72930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010324: membrane invagination	0.00E+00
2	GO:0010055: atrichoblast differentiation	0.00E+00
3	GO:1902001: fatty acid transmembrane transport	0.00E+00
4	GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	0.00E+00
5	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
6	GO:0015690: aluminum cation transport	0.00E+00
7	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
8	GO:0046865: terpenoid transport	0.00E+00
9	GO:0006979: response to oxidative stress	8.42E-07
10	GO:0010112: regulation of systemic acquired resistance	4.15E-06
11	GO:0071456: cellular response to hypoxia	5.23E-05
12	GO:0009643: photosynthetic acclimation	5.54E-05
13	GO:0031347: regulation of defense response	7.94E-05
14	GO:0042391: regulation of membrane potential	8.72E-05
15	GO:0006952: defense response	1.60E-04
16	GO:0010120: camalexin biosynthetic process	1.65E-04
17	GO:0032107: regulation of response to nutrient levels	1.73E-04
18	GO:1902600: hydrogen ion transmembrane transport	1.73E-04
19	GO:0048508: embryonic meristem development	1.73E-04
20	GO:0015760: glucose-6-phosphate transport	1.73E-04
21	GO:0033306: phytol metabolic process	1.73E-04
22	GO:0009700: indole phytoalexin biosynthetic process	1.73E-04
23	GO:0034214: protein hexamerization	1.73E-04
24	GO:0050691: regulation of defense response to virus by host	1.73E-04
25	GO:0042742: defense response to bacterium	2.66E-04
26	GO:0050832: defense response to fungus	2.87E-04
27	GO:0071668: plant-type cell wall assembly	3.92E-04
28	GO:0019441: tryptophan catabolic process to kynurenine	3.92E-04
29	GO:0015914: phospholipid transport	3.92E-04
30	GO:0009838: abscission	3.92E-04
31	GO:0080181: lateral root branching	3.92E-04
32	GO:0055088: lipid homeostasis	3.92E-04
33	GO:0015908: fatty acid transport	3.92E-04
34	GO:0044419: interspecies interaction between organisms	3.92E-04
35	GO:0009945: radial axis specification	3.92E-04
36	GO:0015712: hexose phosphate transport	3.92E-04
37	GO:0051258: protein polymerization	3.92E-04
38	GO:0051707: response to other organism	6.06E-04
39	GO:0035436: triose phosphate transmembrane transport	6.40E-04
40	GO:0015692: lead ion transport	6.40E-04
41	GO:0015695: organic cation transport	6.40E-04
42	GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	6.40E-04
43	GO:0015714: phosphoenolpyruvate transport	6.40E-04
44	GO:0080168: abscisic acid transport	6.40E-04
45	GO:1900055: regulation of leaf senescence	6.40E-04
46	GO:2000377: regulation of reactive oxygen species metabolic process	6.71E-04
47	GO:0009636: response to toxic substance	7.01E-04
48	GO:0015696: ammonium transport	9.13E-04
49	GO:0051289: protein homotetramerization	9.13E-04
50	GO:1901141: regulation of lignin biosynthetic process	1.21E-03
51	GO:0010109: regulation of photosynthesis	1.21E-03
52	GO:0072488: ammonium transmembrane transport	1.21E-03
53	GO:0015713: phosphoglycerate transport	1.21E-03
54	GO:0009611: response to wounding	1.22E-03
55	GO:0034052: positive regulation of plant-type hypersensitive response	1.54E-03
56	GO:0009759: indole glucosinolate biosynthetic process	1.89E-03
57	GO:0006574: valine catabolic process	1.89E-03
58	GO:0009751: response to salicylic acid	2.08E-03
59	GO:0042372: phylloquinone biosynthetic process	2.27E-03
60	GO:0009942: longitudinal axis specification	2.27E-03
61	GO:0009753: response to jasmonic acid	2.37E-03
62	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	2.67E-03
63	GO:0043090: amino acid import	2.67E-03
64	GO:0071446: cellular response to salicylic acid stimulus	2.67E-03
65	GO:1900056: negative regulation of leaf senescence	2.67E-03
66	GO:0050829: defense response to Gram-negative bacterium	2.67E-03
67	GO:1900057: positive regulation of leaf senescence	2.67E-03
68	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	2.67E-03
69	GO:0009819: drought recovery	3.09E-03
70	GO:0030091: protein repair	3.09E-03
71	GO:0009407: toxin catabolic process	3.29E-03
72	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.54E-03
73	GO:0010208: pollen wall assembly	3.54E-03
74	GO:0006997: nucleus organization	3.54E-03
75	GO:0010204: defense response signaling pathway, resistance gene-independent	3.54E-03
76	GO:0009867: jasmonic acid mediated signaling pathway	3.78E-03
77	GO:0006098: pentose-phosphate shunt	4.00E-03
78	GO:0019432: triglyceride biosynthetic process	4.00E-03
79	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	4.49E-03
80	GO:0043069: negative regulation of programmed cell death	4.99E-03
81	GO:0010629: negative regulation of gene expression	4.99E-03
82	GO:0051555: flavonol biosynthetic process	4.99E-03
83	GO:0019538: protein metabolic process	4.99E-03
84	GO:0009870: defense response signaling pathway, resistance gene-dependent	4.99E-03
85	GO:0006032: chitin catabolic process	4.99E-03
86	GO:0009684: indoleacetic acid biosynthetic process	5.52E-03
87	GO:0019684: photosynthesis, light reaction	5.52E-03
88	GO:1903507: negative regulation of nucleic acid-templated transcription	5.52E-03
89	GO:0006855: drug transmembrane transport	5.67E-03
90	GO:0006790: sulfur compound metabolic process	6.06E-03
91	GO:0012501: programmed cell death	6.06E-03
92	GO:0080167: response to karrikin	6.20E-03
93	GO:0010200: response to chitin	6.48E-03
94	GO:2000012: regulation of auxin polar transport	6.61E-03
95	GO:0002237: response to molecule of bacterial origin	7.20E-03
96	GO:0046854: phosphatidylinositol phosphorylation	7.79E-03
97	GO:0009626: plant-type hypersensitive response	8.25E-03
98	GO:0000162: tryptophan biosynthetic process	8.41E-03
99	GO:0009624: response to nematode	9.33E-03
100	GO:0006874: cellular calcium ion homeostasis	9.69E-03
101	GO:0016998: cell wall macromolecule catabolic process	1.03E-02
102	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.10E-02
103	GO:0008152: metabolic process	1.15E-02
104	GO:0009625: response to insect	1.17E-02
105	GO:0006012: galactose metabolic process	1.17E-02
106	GO:0070417: cellular response to cold	1.32E-02
107	GO:0000413: protein peptidyl-prolyl isomerization	1.39E-02
108	GO:0000271: polysaccharide biosynthetic process	1.39E-02
109	GO:0007165: signal transduction	1.46E-02
110	GO:0045489: pectin biosynthetic process	1.47E-02
111	GO:0006520: cellular amino acid metabolic process	1.47E-02
112	GO:0009737: response to abscisic acid	1.51E-02
113	GO:0009646: response to absence of light	1.54E-02
114	GO:0010150: leaf senescence	1.62E-02
115	GO:0009749: response to glucose	1.62E-02
116	GO:0002229: defense response to oomycetes	1.70E-02
117	GO:0010193: response to ozone	1.70E-02
118	GO:0019761: glucosinolate biosynthetic process	1.78E-02
119	GO:0007166: cell surface receptor signaling pathway	1.85E-02
120	GO:0009617: response to bacterium	1.93E-02
121	GO:0071805: potassium ion transmembrane transport	2.04E-02
122	GO:0010029: regulation of seed germination	2.30E-02
123	GO:0006468: protein phosphorylation	2.31E-02
124	GO:0009627: systemic acquired resistance	2.39E-02
125	GO:0006950: response to stress	2.48E-02
126	GO:0016311: dephosphorylation	2.58E-02
127	GO:0010311: lateral root formation	2.77E-02
128	GO:0007568: aging	2.96E-02
129	GO:0009631: cold acclimation	2.96E-02
130	GO:0048527: lateral root development	2.96E-02
131	GO:0006865: amino acid transport	3.06E-02
132	GO:0016051: carbohydrate biosynthetic process	3.16E-02
133	GO:0006897: endocytosis	3.58E-02
134	GO:0045892: negative regulation of transcription, DNA-templated	3.78E-02
135	GO:0009744: response to sucrose	3.79E-02
136	GO:0042538: hyperosmotic salinity response	4.45E-02
137	GO:0009408: response to heat	4.57E-02
138	GO:0006813: potassium ion transport	4.68E-02
139	GO:0010224: response to UV-B	4.80E-02
140	GO:0055114: oxidation-reduction process	4.88E-02
141	GO:0009414: response to water deprivation	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
2	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
3	GO:0030552: cAMP binding	2.33E-05
4	GO:0030553: cGMP binding	2.33E-05
5	GO:0005216: ion channel activity	3.89E-05
6	GO:0005249: voltage-gated potassium channel activity	8.72E-05
7	GO:0030551: cyclic nucleotide binding	8.72E-05
8	GO:0047893: flavonol 3-O-glucosyltransferase activity	1.32E-04
9	GO:0015245: fatty acid transporter activity	1.73E-04
10	GO:2001227: quercitrin binding	1.73E-04
11	GO:0019707: protein-cysteine S-acyltransferase activity	1.73E-04
12	GO:2001147: camalexin binding	1.73E-04
13	GO:0047364: desulfoglucosinolate sulfotransferase activity	3.92E-04
14	GO:0015152: glucose-6-phosphate transmembrane transporter activity	3.92E-04
15	GO:0050736: O-malonyltransferase activity	3.92E-04
16	GO:0004061: arylformamidase activity	3.92E-04
17	GO:0071917: triose-phosphate transmembrane transporter activity	6.40E-04
18	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	6.40E-04
19	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	6.40E-04
20	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	6.40E-04
21	GO:0032403: protein complex binding	6.40E-04
22	GO:0016301: kinase activity	7.95E-04
23	GO:0035251: UDP-glucosyltransferase activity	8.10E-04
24	GO:0022890: inorganic cation transmembrane transporter activity	9.13E-04
25	GO:0015120: phosphoglycerate transmembrane transporter activity	1.21E-03
26	GO:0004834: tryptophan synthase activity	1.21E-03
27	GO:0005496: steroid binding	1.54E-03
28	GO:0016758: transferase activity, transferring hexosyl groups	1.74E-03
29	GO:0008519: ammonium transmembrane transporter activity	1.89E-03
30	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.05E-03
31	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.27E-03
32	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.27E-03
33	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.27E-03
34	GO:0005261: cation channel activity	2.27E-03
35	GO:0003978: UDP-glucose 4-epimerase activity	2.27E-03
36	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.27E-03
37	GO:0004144: diacylglycerol O-acyltransferase activity	2.27E-03
38	GO:0102425: myricetin 3-O-glucosyltransferase activity	2.67E-03
39	GO:0102360: daphnetin 3-O-glucosyltransferase activity	2.67E-03
40	GO:0043295: glutathione binding	2.67E-03
41	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.09E-03
42	GO:0004033: aldo-keto reductase (NADP) activity	3.09E-03
43	GO:0008194: UDP-glycosyltransferase activity	3.13E-03
44	GO:0071949: FAD binding	4.00E-03
45	GO:0047617: acyl-CoA hydrolase activity	4.49E-03
46	GO:0004364: glutathione transferase activity	4.67E-03
47	GO:0004568: chitinase activity	4.99E-03
48	GO:0015386: potassium:proton antiporter activity	5.52E-03
49	GO:0004497: monooxygenase activity	6.20E-03
50	GO:0005315: inorganic phosphate transmembrane transporter activity	6.61E-03
51	GO:0008146: sulfotransferase activity	7.79E-03
52	GO:0005217: intracellular ligand-gated ion channel activity	7.79E-03
53	GO:0004970: ionotropic glutamate receptor activity	7.79E-03
54	GO:0080043: quercetin 3-O-glucosyltransferase activity	8.51E-03
55	GO:0080044: quercetin 7-O-glucosyltransferase activity	8.51E-03
56	GO:0004674: protein serine/threonine kinase activity	8.93E-03
57	GO:0003954: NADH dehydrogenase activity	9.03E-03
58	GO:0001046: core promoter sequence-specific DNA binding	9.03E-03
59	GO:0003714: transcription corepressor activity	9.03E-03
60	GO:0005516: calmodulin binding	9.46E-03
61	GO:0015079: potassium ion transmembrane transporter activity	9.69E-03
62	GO:0043565: sequence-specific DNA binding	9.69E-03
63	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.03E-02
64	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.10E-02
65	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.24E-02
66	GO:0015297: antiporter activity	1.54E-02
67	GO:0015299: solute:proton antiporter activity	1.54E-02
68	GO:0016791: phosphatase activity	1.95E-02
69	GO:0008483: transaminase activity	2.04E-02
70	GO:0008375: acetylglucosaminyltransferase activity	2.39E-02
71	GO:0004806: triglyceride lipase activity	2.48E-02
72	GO:0030247: polysaccharide binding	2.48E-02
73	GO:0004721: phosphoprotein phosphatase activity	2.48E-02
74	GO:0004672: protein kinase activity	2.62E-02
75	GO:0043531: ADP binding	2.75E-02
76	GO:0015238: drug transmembrane transporter activity	2.77E-02
77	GO:0030145: manganese ion binding	2.96E-02
78	GO:0050897: cobalt ion binding	2.96E-02
79	GO:0005507: copper ion binding	3.27E-02
80	GO:0016757: transferase activity, transferring glycosyl groups	3.33E-02
81	GO:0005524: ATP binding	3.45E-02
82	GO:0050661: NADP binding	3.47E-02
83	GO:0042803: protein homodimerization activity	3.89E-02
84	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.01E-02
85	GO:0004722: protein serine/threonine phosphatase activity	4.07E-02
86	GO:0015293: symporter activity	4.12E-02
87	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.23E-02
88	GO:0051287: NAD binding	4.34E-02
89	GO:0005509: calcium ion binding	4.57E-02
90	GO:0016298: lipase activity	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	1.04E-06
2	GO:0005886: plasma membrane	1.07E-04
3	GO:0000138: Golgi trans cisterna	1.73E-04
4	GO:0031304: intrinsic component of mitochondrial inner membrane	3.92E-04
5	GO:0005901: caveola	3.92E-04
6	GO:0005794: Golgi apparatus	9.82E-04
7	GO:0000813: ESCRT I complex	1.54E-03
8	GO:0005802: trans-Golgi network	2.70E-03
9	GO:0005887: integral component of plasma membrane	3.39E-03
10	GO:0005777: peroxisome	6.28E-03
11	GO:0005769: early endosome	8.41E-03
12	GO:0043231: intracellular membrane-bounded organelle	1.15E-02
13	GO:0005768: endosome	1.26E-02
14	GO:0009504: cell plate	1.62E-02
15	GO:0031965: nuclear membrane	1.62E-02
16	GO:0005773: vacuole	2.76E-02
17	GO:0005774: vacuolar membrane	3.43E-02
18	GO:0031902: late endosome membrane	3.58E-02
19	GO:0005635: nuclear envelope	4.91E-02