Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G72645

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1905255: regulation of RNA binding transcription factor activity0.00E+00
2GO:0002949: tRNA threonylcarbamoyladenosine modification0.00E+00
3GO:0080127: fruit septum development0.00E+00
4GO:0032212: positive regulation of telomere maintenance via telomerase0.00E+00
5GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
6GO:0032206: positive regulation of telomere maintenance0.00E+00
7GO:0006907: pinocytosis0.00E+00
8GO:0006437: tyrosyl-tRNA aminoacylation0.00E+00
9GO:0070125: mitochondrial translational elongation0.00E+00
10GO:0019685: photosynthesis, dark reaction0.00E+00
11GO:0045014: negative regulation of transcription by glucose0.00E+00
12GO:0000373: Group II intron splicing2.49E-06
13GO:0009733: response to auxin8.29E-06
14GO:0009926: auxin polar transport2.41E-05
15GO:0046620: regulation of organ growth4.56E-05
16GO:0009734: auxin-activated signaling pathway1.92E-04
17GO:0009090: homoserine biosynthetic process6.13E-04
18GO:0043489: RNA stabilization6.13E-04
19GO:0019478: D-amino acid catabolic process6.13E-04
20GO:0043686: co-translational protein modification6.13E-04
21GO:0043087: regulation of GTPase activity6.13E-04
22GO:0043609: regulation of carbon utilization6.13E-04
23GO:0051013: microtubule severing6.13E-04
24GO:0034757: negative regulation of iron ion transport6.13E-04
25GO:0071482: cellular response to light stimulus1.05E-03
26GO:0009958: positive gravitropism1.14E-03
27GO:0061062: regulation of nematode larval development1.32E-03
28GO:0010271: regulation of chlorophyll catabolic process1.32E-03
29GO:0001736: establishment of planar polarity1.32E-03
30GO:0009786: regulation of asymmetric cell division1.32E-03
31GO:0031648: protein destabilization1.32E-03
32GO:2000123: positive regulation of stomatal complex development1.32E-03
33GO:0010024: phytochromobilin biosynthetic process1.32E-03
34GO:0043039: tRNA aminoacylation1.32E-03
35GO:0010583: response to cyclopentenone1.63E-03
36GO:0040008: regulation of growth1.70E-03
37GO:0048829: root cap development1.73E-03
38GO:0006000: fructose metabolic process2.17E-03
39GO:0080117: secondary growth2.17E-03
40GO:0071398: cellular response to fatty acid2.17E-03
41GO:0030029: actin filament-based process2.17E-03
42GO:0045910: negative regulation of DNA recombination2.17E-03
43GO:0090506: axillary shoot meristem initiation2.17E-03
44GO:0005983: starch catabolic process2.30E-03
45GO:0045037: protein import into chloroplast stroma2.30E-03
46GO:0010582: floral meristem determinacy2.30E-03
47GO:0009725: response to hormone2.62E-03
48GO:1990019: protein storage vacuole organization3.15E-03
49GO:2001141: regulation of RNA biosynthetic process3.15E-03
50GO:0009067: aspartate family amino acid biosynthetic process3.15E-03
51GO:0051513: regulation of monopolar cell growth3.15E-03
52GO:0051639: actin filament network formation3.15E-03
53GO:0034059: response to anoxia3.15E-03
54GO:0010239: chloroplast mRNA processing3.15E-03
55GO:0009825: multidimensional cell growth3.32E-03
56GO:0051017: actin filament bundle assembly4.12E-03
57GO:2000038: regulation of stomatal complex development4.25E-03
58GO:0006021: inositol biosynthetic process4.25E-03
59GO:0009956: radial pattern formation4.25E-03
60GO:0009755: hormone-mediated signaling pathway4.25E-03
61GO:0051764: actin crosslink formation4.25E-03
62GO:0009765: photosynthesis, light harvesting4.25E-03
63GO:0010375: stomatal complex patterning5.46E-03
64GO:0080110: sporopollenin biosynthetic process5.46E-03
65GO:0009696: salicylic acid metabolic process5.46E-03
66GO:0016120: carotene biosynthetic process5.46E-03
67GO:0045487: gibberellin catabolic process5.46E-03
68GO:0048497: maintenance of floral organ identity5.46E-03
69GO:0031365: N-terminal protein amino acid modification5.46E-03
70GO:0009107: lipoate biosynthetic process5.46E-03
71GO:0016123: xanthophyll biosynthetic process5.46E-03
72GO:0010438: cellular response to sulfur starvation5.46E-03
73GO:0010158: abaxial cell fate specification5.46E-03
74GO:0009831: plant-type cell wall modification involved in multidimensional cell growth5.99E-03
75GO:0009686: gibberellin biosynthetic process5.99E-03
76GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway6.20E-03
77GO:0016554: cytidine to uridine editing6.78E-03
78GO:0009913: epidermal cell differentiation6.78E-03
79GO:0009920: cell plate formation involved in plant-type cell wall biogenesis6.78E-03
80GO:1902456: regulation of stomatal opening6.78E-03
81GO:0048831: regulation of shoot system development6.78E-03
82GO:0003006: developmental process involved in reproduction6.78E-03
83GO:0016117: carotenoid biosynthetic process7.07E-03
84GO:0010087: phloem or xylem histogenesis7.65E-03
85GO:0009942: longitudinal axis specification8.20E-03
86GO:0031930: mitochondria-nucleus signaling pathway8.20E-03
87GO:0048509: regulation of meristem development8.20E-03
88GO:0030488: tRNA methylation8.20E-03
89GO:0009088: threonine biosynthetic process8.20E-03
90GO:0010019: chloroplast-nucleus signaling pathway8.20E-03
91GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity8.20E-03
92GO:0071333: cellular response to glucose stimulus8.20E-03
93GO:0010305: leaf vascular tissue pattern formation8.25E-03
94GO:0010050: vegetative phase change9.71E-03
95GO:0010098: suspensor development9.71E-03
96GO:0015693: magnesium ion transport9.71E-03
97GO:0006402: mRNA catabolic process1.13E-02
98GO:0010439: regulation of glucosinolate biosynthetic process1.13E-02
99GO:0009819: drought recovery1.13E-02
100GO:0009850: auxin metabolic process1.13E-02
101GO:2000070: regulation of response to water deprivation1.13E-02
102GO:0000105: histidine biosynthetic process1.13E-02
103GO:0009828: plant-type cell wall loosening1.24E-02
104GO:0007186: G-protein coupled receptor signaling pathway1.30E-02
105GO:0010497: plasmodesmata-mediated intercellular transport1.30E-02
106GO:0009657: plastid organization1.30E-02
107GO:0032544: plastid translation1.30E-02
108GO:0007389: pattern specification process1.30E-02
109GO:0006002: fructose 6-phosphate metabolic process1.30E-02
110GO:0009624: response to nematode1.46E-02
111GO:0006098: pentose-phosphate shunt1.48E-02
112GO:0051865: protein autoubiquitination1.48E-02
113GO:0048507: meristem development1.48E-02
114GO:0048589: developmental growth1.48E-02
115GO:0042761: very long-chain fatty acid biosynthetic process1.67E-02
116GO:0009086: methionine biosynthetic process1.67E-02
117GO:1900865: chloroplast RNA modification1.67E-02
118GO:0016571: histone methylation1.67E-02
119GO:0016573: histone acetylation1.67E-02
120GO:0005982: starch metabolic process1.67E-02
121GO:0006779: porphyrin-containing compound biosynthetic process1.67E-02
122GO:0000723: telomere maintenance1.67E-02
123GO:0009299: mRNA transcription1.86E-02
124GO:0006782: protoporphyrinogen IX biosynthetic process1.86E-02
125GO:0009870: defense response signaling pathway, resistance gene-dependent1.86E-02
126GO:0006535: cysteine biosynthetic process from serine1.86E-02
127GO:0009641: shade avoidance1.86E-02
128GO:0006298: mismatch repair1.86E-02
129GO:0016441: posttranscriptional gene silencing1.86E-02
130GO:0006949: syncytium formation1.86E-02
131GO:0010192: mucilage biosynthetic process1.86E-02
132GO:0010629: negative regulation of gene expression1.86E-02
133GO:0009793: embryo development ending in seed dormancy1.97E-02
134GO:0009832: plant-type cell wall biogenesis2.04E-02
135GO:0010311: lateral root formation2.04E-02
136GO:0000160: phosphorelay signal transduction system2.04E-02
137GO:0009682: induced systemic resistance2.06E-02
138GO:0009089: lysine biosynthetic process via diaminopimelate2.06E-02
139GO:0008285: negative regulation of cell proliferation2.06E-02
140GO:0006352: DNA-templated transcription, initiation2.06E-02
141GO:0009750: response to fructose2.06E-02
142GO:0048765: root hair cell differentiation2.06E-02
143GO:0010152: pollen maturation2.27E-02
144GO:0010105: negative regulation of ethylene-activated signaling pathway2.27E-02
145GO:0006790: sulfur compound metabolic process2.27E-02
146GO:0006865: amino acid transport2.36E-02
147GO:0010588: cotyledon vascular tissue pattern formation2.49E-02
148GO:0030048: actin filament-based movement2.49E-02
149GO:0010102: lateral root morphogenesis2.49E-02
150GO:2000028: regulation of photoperiodism, flowering2.49E-02
151GO:0006094: gluconeogenesis2.49E-02
152GO:0045892: negative regulation of transcription, DNA-templated2.70E-02
153GO:0010207: photosystem II assembly2.71E-02
154GO:0010020: chloroplast fission2.71E-02
155GO:0009933: meristem structural organization2.71E-02
156GO:0010223: secondary shoot formation2.71E-02
157GO:0010540: basipetal auxin transport2.71E-02
158GO:0009266: response to temperature stimulus2.71E-02
159GO:0048467: gynoecium development2.71E-02
160GO:0046854: phosphatidylinositol phosphorylation2.94E-02
161GO:0009416: response to light stimulus3.07E-02
162GO:0010025: wax biosynthetic process3.18E-02
163GO:0006863: purine nucleobase transport3.18E-02
164GO:0009833: plant-type primary cell wall biogenesis3.18E-02
165GO:0009744: response to sucrose3.18E-02
166GO:0042546: cell wall biogenesis3.31E-02
167GO:0006338: chromatin remodeling3.42E-02
168GO:0005992: trehalose biosynthetic process3.42E-02
169GO:0019344: cysteine biosynthetic process3.42E-02
170GO:0009636: response to toxic substance3.58E-02
171GO:0009965: leaf morphogenesis3.58E-02
172GO:0006418: tRNA aminoacylation for protein translation3.67E-02
173GO:0043622: cortical microtubule organization3.67E-02
174GO:0003333: amino acid transmembrane transport3.93E-02
175GO:0009664: plant-type cell wall organization3.99E-02
176GO:0016226: iron-sulfur cluster assembly4.19E-02
177GO:2000022: regulation of jasmonic acid mediated signaling pathway4.19E-02
178GO:0009736: cytokinin-activated signaling pathway4.28E-02
179GO:0009693: ethylene biosynthetic process4.46E-02
180GO:0071215: cellular response to abscisic acid stimulus4.46E-02
181GO:0010082: regulation of root meristem growth4.46E-02
182GO:0001944: vasculature development4.46E-02
183GO:0009625: response to insect4.46E-02
184GO:0048443: stamen development4.73E-02
185GO:0010091: trichome branching4.73E-02
186GO:0006284: base-excision repair4.73E-02
187GO:0010584: pollen exine formation4.73E-02
188GO:0009826: unidimensional cell growth4.77E-02
189GO:0016310: phosphorylation4.82E-02
190GO:0009658: chloroplast organization4.99E-02
RankGO TermAdjusted P value
1GO:0071633: dihydroceramidase activity0.00E+00
2GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
3GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
4GO:0045435: lycopene epsilon cyclase activity0.00E+00
5GO:0004401: histidinol-phosphatase activity0.00E+00
6GO:0061711: N(6)-L-threonylcarbamoyladenine synthase0.00E+00
7GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor0.00E+00
8GO:0047793: cycloeucalenol cycloisomerase activity0.00E+00
9GO:0052834: inositol monophosphate phosphatase activity0.00E+00
10GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity0.00E+00
11GO:0008805: carbon-monoxide oxygenase activity1.62E-05
12GO:0001872: (1->3)-beta-D-glucan binding1.13E-04
13GO:0010011: auxin binding1.93E-04
14GO:0004831: tyrosine-tRNA ligase activity6.13E-04
15GO:0008568: microtubule-severing ATPase activity6.13E-04
16GO:0019203: carbohydrate phosphatase activity6.13E-04
17GO:0042586: peptide deformylase activity6.13E-04
18GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity6.13E-04
19GO:0010347: L-galactose-1-phosphate phosphatase activity6.13E-04
20GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity6.13E-04
21GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity6.13E-04
22GO:0005227: calcium activated cation channel activity6.13E-04
23GO:0008934: inositol monophosphate 1-phosphatase activity1.32E-03
24GO:0052833: inositol monophosphate 4-phosphatase activity1.32E-03
25GO:0004412: homoserine dehydrogenase activity1.32E-03
26GO:0019156: isoamylase activity1.32E-03
27GO:0050736: O-malonyltransferase activity1.32E-03
28GO:0009884: cytokinin receptor activity1.32E-03
29GO:0050017: L-3-cyanoalanine synthase activity1.32E-03
30GO:0017118: lipoyltransferase activity1.32E-03
31GO:0045543: gibberellin 2-beta-dioxygenase activity1.32E-03
32GO:0043425: bHLH transcription factor binding1.32E-03
33GO:0016415: octanoyltransferase activity1.32E-03
34GO:0004047: aminomethyltransferase activity1.32E-03
35GO:0052832: inositol monophosphate 3-phosphatase activity1.32E-03
36GO:0003913: DNA photolyase activity2.17E-03
37GO:0004148: dihydrolipoyl dehydrogenase activity2.17E-03
38GO:0005034: osmosensor activity2.17E-03
39GO:0016707: gibberellin 3-beta-dioxygenase activity2.17E-03
40GO:0030247: polysaccharide binding2.96E-03
41GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity3.15E-03
42GO:0043047: single-stranded telomeric DNA binding3.15E-03
43GO:0080031: methyl salicylate esterase activity3.15E-03
44GO:0004072: aspartate kinase activity3.15E-03
45GO:0016987: sigma factor activity4.25E-03
46GO:0010328: auxin influx transmembrane transporter activity4.25E-03
47GO:0019199: transmembrane receptor protein kinase activity4.25E-03
48GO:0001053: plastid sigma factor activity4.25E-03
49GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed4.25E-03
50GO:0005471: ATP:ADP antiporter activity5.46E-03
51GO:0008725: DNA-3-methyladenine glycosylase activity5.46E-03
52GO:0030570: pectate lyase activity5.99E-03
53GO:0004556: alpha-amylase activity6.78E-03
54GO:2001070: starch binding6.78E-03
55GO:0030983: mismatched DNA binding6.78E-03
56GO:0080030: methyl indole-3-acetate esterase activity6.78E-03
57GO:0004332: fructose-bisphosphate aldolase activity6.78E-03
58GO:0004709: MAP kinase kinase kinase activity6.78E-03
59GO:0043621: protein self-association7.01E-03
60GO:0003723: RNA binding8.02E-03
61GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity8.20E-03
62GO:0016832: aldehyde-lyase activity8.20E-03
63GO:0019900: kinase binding8.20E-03
64GO:0004124: cysteine synthase activity8.20E-03
65GO:0019901: protein kinase binding9.53E-03
66GO:0009881: photoreceptor activity9.71E-03
67GO:0042162: telomeric DNA binding9.71E-03
68GO:0051015: actin filament binding1.17E-02
69GO:0003724: RNA helicase activity1.30E-02
70GO:0008138: protein tyrosine/serine/threonine phosphatase activity1.48E-02
71GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.48E-02
72GO:0009672: auxin:proton symporter activity1.67E-02
73GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.85E-02
74GO:0004673: protein histidine kinase activity1.86E-02
75GO:0004805: trehalose-phosphatase activity1.86E-02
76GO:0005096: GTPase activator activity2.04E-02
77GO:0005089: Rho guanyl-nucleotide exchange factor activity2.06E-02
78GO:0050897: cobalt ion binding2.25E-02
79GO:0010329: auxin efflux transmembrane transporter activity2.49E-02
80GO:0015095: magnesium ion transmembrane transporter activity2.49E-02
81GO:0000155: phosphorelay sensor kinase activity2.49E-02
82GO:0004712: protein serine/threonine/tyrosine kinase activity2.70E-02
83GO:0008266: poly(U) RNA binding2.71E-02
84GO:0003774: motor activity2.71E-02
85GO:0004871: signal transducer activity2.83E-02
86GO:0008061: chitin binding2.94E-02
87GO:0003712: transcription cofactor activity2.94E-02
88GO:0008146: sulfotransferase activity2.94E-02
89GO:0102336: 3-oxo-arachidoyl-CoA synthase activity3.18E-02
90GO:0102337: 3-oxo-cerotoyl-CoA synthase activity3.18E-02
91GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity3.18E-02
92GO:0008134: transcription factor binding3.42E-02
93GO:0051536: iron-sulfur cluster binding3.42E-02
94GO:0031418: L-ascorbic acid binding3.42E-02
95GO:0005345: purine nucleobase transmembrane transporter activity3.67E-02
96GO:0043424: protein histidine kinase binding3.67E-02
97GO:0033612: receptor serine/threonine kinase binding3.93E-02
98GO:0003964: RNA-directed DNA polymerase activity3.93E-02
99GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity4.19E-02
100GO:0016760: cellulose synthase (UDP-forming) activity4.46E-02
101GO:0015171: amino acid transmembrane transporter activity4.73E-02
RankGO TermAdjusted P value
1GO:0000408: EKC/KEOPS complex0.00E+00
2GO:0009537: proplastid0.00E+00
3GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
4GO:0035452: extrinsic component of plastid membrane0.00E+00
5GO:0009507: chloroplast1.67E-06
6GO:0009986: cell surface6.95E-04
7GO:0009569: chloroplast starch grain1.32E-03
8GO:0009513: etioplast1.32E-03
9GO:0005697: telomerase holoenzyme complex1.32E-03
10GO:0009509: chromoplast2.17E-03
11GO:0030139: endocytic vesicle2.17E-03
12GO:0030529: intracellular ribonucleoprotein complex2.40E-03
13GO:0032585: multivesicular body membrane3.15E-03
14GO:0032432: actin filament bundle3.15E-03
15GO:0009570: chloroplast stroma4.40E-03
16GO:0042807: central vacuole9.71E-03
17GO:0009501: amyloplast1.13E-02
18GO:0000326: protein storage vacuole1.30E-02
19GO:0000784: nuclear chromosome, telomeric region1.30E-02
20GO:0046930: pore complex1.30E-02
21GO:0010494: cytoplasmic stress granule1.48E-02
22GO:0016459: myosin complex1.86E-02
23GO:0005623: cell2.01E-02
24GO:0005884: actin filament2.06E-02
25GO:0009574: preprophase band2.49E-02
26GO:0005578: proteinaceous extracellular matrix2.49E-02
27GO:0009941: chloroplast envelope2.69E-02
28GO:0030095: chloroplast photosystem II2.71E-02
29GO:0005875: microtubule associated complex3.18E-02
30GO:0005886: plasma membrane3.29E-02
31GO:0009654: photosystem II oxygen evolving complex3.67E-02
32GO:0046658: anchored component of plasma membrane4.12E-02
33GO:0015629: actin cytoskeleton4.46E-02
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Gene type



Gene DE type